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1.
Biochem Biophys Res Commun ; 295(3): 636-43, 2002 Jul 19.
Article in English | MEDLINE | ID: mdl-12099686

ABSTRACT

Secondary structure predictions have led to the identification of a major membrane-anchoring domain of the cytoskeletal protein talin spanning from amino acid 385 to 406. Using a synthetically derived peptide of this region, researchers have shown that it inserts into POPC/POPG phospholipid membranes with a partition coefficient of K(app)=1.1+/-0.2 x 10(5) M(-1) and has an average molar reaction enthalpy of DeltaH=-2.5 kcal/mol, as determined by monolayer expansion technique and isothermic titration calorimetry [J. Biol. Chem. 275, 17954]. We applied resonance energy transfer (RET) assays to analyze the fusogenic properties of this peptide by lipid mixing and used liposomes containing carboxyfluorescein to measure the contents leakage. We directly visualized talin peptide-induced vesicle membrane fusion using cryo-electron microscopy. This is the first example of a cytoskeletal protein domain that can trigger membrane fusion that might be of importance for understanding membrane targeting and motile events at the leading edge of the cell.


Subject(s)
Cytoskeleton/metabolism , Lipids/chemistry , Membrane Fusion , Talin/metabolism , Cryoelectron Microscopy , Energy Transfer , Fluoresceins/pharmacology , Kinetics , Lipid Metabolism , Liposomes/metabolism , Models, Chemical , Models, Molecular , Peptide Biosynthesis , Protein Binding , Protein Structure, Secondary , Protein Structure, Tertiary , Talin/chemistry , Thermodynamics , Time Factors
2.
Eur J Biochem ; 269(4): 1253-8, 2002 Feb.
Article in English | MEDLINE | ID: mdl-11856359

ABSTRACT

The naturally synchronous plasmodia of myxomycetes synthesize poly(beta-l-malic acid), which carries out cell-specific functions. In Physarum polycephalum, poly(beta-l-malate) [the salt form of poly(beta-l-malic acid)] is highly concentrated in the nuclei, repressing DNA synthetic activity of DNA polymerases by the formation of reversible complexes. To test whether this inhibitory activity is cell-cycle-dependent, purified DNA polymerase alpha of P. polycephalum was added to the nuclear extract and the activity was measured by the incorporation of [3H]thymidine 5'-monophosphate into acid precipitable nick-activated salmon testis DNA. Maximum DNA synthesis by the reporter was measured in S-phase, equivalent to a minimum of inhibitory activity. To test for the activity of endogenous DNA polymerases, DNA synthesis was followed by the highly sensitive photoaffinity labeling technique. Labeling was observed in S-phase in agreement with the minimum of the inhibitory activity. The activity was constant throughout the cell cycle when the inhibition was neutralized by the addition of spermidine hydrochloride. Also, the concentration of poly(beta-l-malate) did not vary with the phase of the cell cycle [Schmidt, A., Windisch, C. & Holler, E. (1996) Nuclear accumulation and homeostasis of the unusual polymer poly(beta-l-malate) in plasmodia of Physarum polycephalum. Eur. J. Cell Biol. 70, 373-380]. To explain the variation in the cell cycle, a periodic competition for poly(beta-l-malate) between DNA polymerases and most likely certain histones was assumed. These effectors are synthesized in S-phase. By competition they displace DNA polymerase from the complex of poly(beta-l-malate). The free polymerases, which are no longer inhibited, engage in DNA synthesis. It is speculated that poly(beta-l-malate) is active in maintaining mitotic synchrony of plasmodia by playing the mediator between the periodic synthesis of certain proteins and the catalytic competence of DNA polymerases.


Subject(s)
Malates/pharmacology , Nucleic Acid Synthesis Inhibitors , Physarum polycephalum/cytology , Physarum polycephalum/enzymology , Polymers/pharmacology , Animals , Cell Cycle , Cell Nucleus/metabolism , Cell-Free System , Subcellular Fractions/metabolism
3.
Microbiology (Reading) ; 144 ( Pt 11): 3181-3193, 1998 Nov.
Article in English | MEDLINE | ID: mdl-9846754

ABSTRACT

The plasmodium of Physarum polycephalum has long been considered a model system for syncytically growing cells, but important details of the DNA replication apparatus, such as the DNA polymerase epsilon and other replication factors, have not been detected. In this study, a new variation of photoaffinity labelling and immunoblotting was used to detect DNA polymerases and other factors in nuclear extracts of P. polycaphalum. Proteins were specifically cross-linked with photoreactive arylazido-dCMP residues incorporated during extension of template-primer DNA. The DNA synthesized in situ was 32P-labelled. After nucleolytic removal of protruding DNA, the proteins were separated by SDS-gel electrophoresis, electroblotted on membranes and subjected to autoradiography. The alpha, delta, epsilon and beta-like DNA polymerases were labelled, as were histones and replication-factor-like proteins. Cytoplasmic extracts were devoid of these species. Abundant proliferating-cell nuclear antigen and replication protein A large subunit were labelled and found to be of unusual mass. A number of subunits of purified DNA polymerase holoenzymes were labelled. In contrast, only the DNA-polymerizing subunits could be labelled in nuclear extracts. Higher-order complexes in the nuclear extract may make subunits inaccessible to photo-cross-linking. Complex formation is promoted by beta-poly(L-malate), a plasmodium-specific putative storage and carrier molecule that supports DNA replication in the synchronized nuclei. Percoll, a polyvinylpyrrolidone-coated colloidal silica, partially disrupted these complexes. A 200 kDa fragment of DNA polymerase epsilon and a 135 kDa beta-like DNA polymerase did not participate in the complexes, suggesting functions unlike those of the other polymerases. DNA polymerase molecules were intact during proliferation of plasmodia, but were nicked before their clearance from the nuclei at growth arrest.


Subject(s)
DNA Replication , DNA, Fungal/biosynthesis , DNA-Directed DNA Polymerase/metabolism , Physarum polycephalum/metabolism , Animals , Cell Nucleus/enzymology , Cell Nucleus/metabolism , DNA Polymerase II/isolation & purification , DNA Polymerase II/metabolism , DNA-Directed DNA Polymerase/isolation & purification , Malates/pharmacology , Photoaffinity Labels , Physarum polycephalum/enzymology , Physarum polycephalum/growth & development , Polymers/pharmacology , Povidone/pharmacology , Silicon Dioxide/pharmacology
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