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3.
Melanoma Res ; 25(2): 169-72, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25535872

ABSTRACT

Levels of the actin bundling protein fascin correlate with invasion and metastasis and reveal prognostic value in many epithelial carcinomas. However, we know very little about the potential role of fascin in melanoma. The purpose of this study is to compare fascin expression in primary melanomas and melanoma metastasis. Fascin expression was examined through the immunohistochemistry of paraffin embedded tissue microarrays including 560 cores of primary tumour and metastasis. Fascin expression was significantly elevated in 48 metastases compared with 254 primary tumours (P=0.034). In 187 patients with primary melanomas, fascin was not correlated with survival (P=0.067), whereas low fascin was significantly correlated with the presence of ulceration (P=0.005). Our results indicate that fascin status does not correlate with progression in melanoma. Upregulated fascin expression was detected in melanoma metastases, but was not correlated to patient outcome.


Subject(s)
Biomarkers, Tumor/analysis , Carrier Proteins/analysis , Melanoma/chemistry , Melanoma/secondary , Microfilament Proteins/analysis , Skin Neoplasms/chemistry , Skin Neoplasms/pathology , Disease Progression , Female , Humans , Immunohistochemistry , Kaplan-Meier Estimate , Male , Melanoma/mortality , Melanoma/surgery , Prognosis , Skin Neoplasms/mortality , Skin Neoplasms/surgery , Time Factors , Tissue Array Analysis , Up-Regulation
4.
BMC Genomics ; 14: 469, 2013 Jul 11.
Article in English | MEDLINE | ID: mdl-23845084

ABSTRACT

BACKGROUND: Biopsies taken from individual tumours exhibit extensive differences in their cellular composition due to the inherent heterogeneity of cancers and vagaries of sample collection. As a result genes expressed in specific cell types, or associated with certain biological processes are detected at widely variable levels across samples in transcriptomic analyses. This heterogeneity also means that the level of expression of genes expressed specifically in a given cell type or process, will vary in line with the number of those cells within samples or activity of the pathway, and will therefore be correlated in their expression. RESULTS: Using a novel 3D network-based approach we have analysed six large human cancer microarray datasets derived from more than 1,000 individuals. Based upon this analysis, and without needing to isolate the individual cells, we have defined a broad spectrum of cell-type and pathway-specific gene signatures present in cancer expression data which were also found to be largely conserved in a number of independent datasets. CONCLUSIONS: The conserved signature of the tumour-associated macrophage is shown to be largely-independent of tumour cell type. All stromal cell signatures have some degree of correlation with each other, since they must all be inversely correlated with the tumour component. However, viewed in the context of established tumours, the interactions between stromal components appear to be multifactorial given the level of one component e.g. vasculature, does not correlate tightly with another, such as the macrophage.


Subject(s)
Databases, Genetic , Gene Expression Profiling , Genes, Neoplasm/genetics , Neoplasms/genetics , Neoplasms/pathology , Tumor Microenvironment/genetics , Computer Graphics , Conserved Sequence/genetics , Humans , Phenotype , Transcription, Genetic/genetics
5.
Histopathology ; 62(2): 343-50, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23020778

ABSTRACT

AIMS: Elevated expression of DNA repair and replication genes has been reported in thick, non-fixed primary melanomas that subsequently went on to metastasize, when compared to non-recurrent primary tumours. This increased expression could contribute to the extreme resistance shown by melanoma to DNA-damaging chemotherapeutics. We have investigated the hypothesis that levels of key DNA repair and replication proteins are prognostic biomarkers in melanoma. METHODS AND RESULTS: We used a tissue microarray containing samples from all stages of melanomagenesis to investigate the hypothesis that levels of key DNA repair and replication proteins are prognostic biomarkers in a larger, more representative and readily available set of fixed primary melanomas. High expression of topoisomerase IIα (TOP2A), that relieves torsional stress during DNA replication, and XRCC5 (Ku80), required for DNA double-strand break repair, were associated with significantly worse survival. CONCLUSIONS: Two (XRCC5 and TOP2A) of seven DNA repair and replication proteins studied were prognostic for melanoma.


Subject(s)
Antigens, Neoplasm/metabolism , DNA Helicases/metabolism , DNA Repair , DNA Topoisomerases, Type II/metabolism , DNA-Binding Proteins/metabolism , Melanoma/secondary , Skin Neoplasms/pathology , Biomarkers, Tumor/metabolism , Disease Progression , Female , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Humans , Kaplan-Meier Estimate , Ku Autoantigen , Lymph Nodes/pathology , Male , Melanoma/genetics , Melanoma/metabolism , Melanoma/mortality , Poly-ADP-Ribose Binding Proteins , Prognosis , Proportional Hazards Models , Skin Neoplasms/genetics , Skin Neoplasms/metabolism , Skin Neoplasms/mortality , Survival Rate , Tissue Array Analysis , United Kingdom/epidemiology
6.
Cancer Genet ; 205(11): 599-602, 2012 Nov.
Article in English | MEDLINE | ID: mdl-23064135

ABSTRACT

The 3q21q26 inversion is associated with both myelodysplastic syndrome (MDS) and acute myeloid leukemia (AML), often in association with monosomy 7. In this report, we present a young woman and her mother, both diagnosed with AML, exhibiting similar morphological and identical cytogenetic features. AML with abnormalities of chromosome 3q is often characterized by abnormal megakaryopoeisis and diabetes insipidus, and both were seen in these cases. To our knowledge, this is the first report of familial aggregation of AML displaying an inversion of chromosome 3q and monosomy 7. We discuss possible mechanisms for the development of familial AML with identical karyotypic abnormalities and the link between 3q aberrations and monosomy 7.


Subject(s)
Chromosome Disorders/genetics , Chromosome Inversion , Chromosomes, Human, Pair 3 , Leukemia, Myeloid, Acute/genetics , Myelodysplastic Syndromes/genetics , Abnormal Karyotype , Bone Marrow Cells/pathology , Chromosome Deletion , Chromosome Disorders/pathology , Chromosomes, Human, Pair 7/genetics , Fatal Outcome , Female , Histocytochemistry , Humans , Leukemia, Myeloid, Acute/pathology , Megakaryocytes , Middle Aged , Myelodysplastic Syndromes/pathology , Young Adult
7.
Eur J Cancer ; 48(6): 865-74, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22071132

ABSTRACT

AIMS: Galectin-3 plays an important role in adhesion, proliferation, differentiation, angiogenesis and metastasis in multiple tumours. To investigate the role of galectin-3 in melanoma pathogenesis we examined the expression of galectin-3 in melanocytic lesions and analysed the correlation between galectin-3 expression and clinicopathologic factors including patient survival and BRAF mutation status. METHODS: We evaluated the expression of galectin-3 in 53 cases of benign naevi, 31 cases of dysplastic naevi, 59 in-situ melanomas, 314 cases of primary melanoma and 69 metastatic melanomas using tissue microarray and immunohistochemistry. RESULTS: Marked differences in expression of galectin-3 were seen between different categories of melanocytic lesions (ANOVA p<0.0001). An increase in expression of galectin-3 between benign naevi and thin primary melanomas and a progressive decrease in expression between thin primary melanomas and thicker melanomas or metastatic melanomas was seen. Strong galectin-3 expression was associated with improved overall survival (p=0.002 and p=0.0002 for cytoplasmic and nuclear expression, respectively) and melanoma-specific survival (p=0.017 and p=0.003 for cytoplasmic and nuclear expression, respectively). A multifactorial Cox regression analysis suggested that galectin-3 expression was an independent prognostic marker for overall survival in melanoma (risk ratio 0.73, 95% CI 0.547-0.970, p=0.031 for cytoplasmic expression and risk ratio 0.76, 95% CI 0.587-0.985, p=0.036 for nuclear expression). No association between galectin-3 expression and BRAF mutation status was observed. CONCLUSION: This study suggests that galectin-3 is a marker of progression in melanocytic lesions and a novel prognostic marker in primary melanoma.


Subject(s)
Galectin 3/metabolism , Melanoma/metabolism , Melanoma/pathology , Neoplasm Proteins/metabolism , Skin Neoplasms/metabolism , Skin Neoplasms/pathology , Adult , Aged , Analysis of Variance , DNA Mutational Analysis , Disease Progression , Female , Humans , Immunohistochemistry , Male , Melanoma/genetics , Microarray Analysis , Middle Aged , Mutation , Prognosis , Proportional Hazards Models , Proto-Oncogene Proteins B-raf/genetics , Risk Factors , Scotland , Skin Neoplasms/genetics , Survival Analysis
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