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1.
Chemphyschem ; : e202400328, 2024 May 28.
Article in English | MEDLINE | ID: mdl-38804589

ABSTRACT

The valence band electronic structure of isolated silver iodide nanoparticles (AgI NP) was investigated by vacuum-ultraviolet aerosol photoelectron spectroscopy using the velocity map imaging technique (VUV VMI-PES). The VUV VMI-PES results were obtained for polydisperse aerosol produced by aggregation of hydrocolloid of silver iodide particles 8-15 nm in size. The ionization energy of the AgI particles was found to be 6.0±0.1 eV with respect to the vacuum level. The DFT calculations showed that the main contribution to the density of AgI electronic states in the valence region originates from I 5p orbitals. The dependence of the asymmetry parameter on the electron energy showed that the value of the characteristic energy loss of excited photoelectrons was 2.7 eV, which coincided with the band gap of the nanomaterial.

2.
NAR Genom Bioinform ; 6(1): lqae027, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38486885

ABSTRACT

Structural knowledge of protein assemblies in their physiological environment is paramount to understand cellular functions at the molecular level. Protein interactions from Imaging Complexes after Translocation (PICT) is a live-cell imaging technique for the structural characterization of macromolecular assemblies in living cells. PICT relies on the measurement of the separation between labelled molecules using fluorescence microscopy and cell engineering. Unfortunately, the required computational tools to extract molecular distances involve a variety of sophisticated software programs that challenge reproducibility and limit their implementation to highly specialized researchers. Here we introduce PyF2F, a Python-based software that provides a workflow for measuring molecular distances from PICT data, with minimal user programming expertise. We used a published dataset to validate PyF2F's performance.

3.
Colloids Surf B Biointerfaces ; 227: 113340, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37201446

ABSTRACT

Gold nanoparticles were functionalized by amino acid tryptophan and vitamin riboflavin - a resonance energy transfer (RET) pair of biomolecules. The presence of the gold nanoparticles resulted in 65% increase in RET efficiency. Because of enhanced RET efficiency, the photobleaching dynamics of the fluorescent molecules at the surface of the nanoparticles is different from that of molecules in solution. The observed effect was used for detection of the functionalized nanoparticles within biological material rich with autofluorescent species. Synchrotron radiation deep-ultraviolet fluorescence microscopy is used to study the photobleaching dynamics of the fluorescence centers within human hepatocellular carcinoma Huh7.5.1 cells incubated with the nanoparticles. The fluorescent centers were classified according to their photobleaching dynamics, which enabled the discrimination of the cell areas where the accumulation of the nanoparticles takes place, even though the particles were smaller than the spatial resolution of the images.


Subject(s)
Metal Nanoparticles , Humans , Metal Nanoparticles/chemistry , Tryptophan/chemistry , Gold/chemistry , Riboflavin , Fluorescence Resonance Energy Transfer/methods , Fluorescent Dyes/chemistry
4.
J Phys Chem Lett ; 9(13): 3604-3611, 2018 Jul 05.
Article in English | MEDLINE | ID: mdl-29902010

ABSTRACT

We report an investigation of lead halide perovskite CH3NH3PbBr3 nanocrystals and associated ligand molecules by combining several different state-of-the-art experimental techniques, including synchrotron radiation-based XPS and VUV PES of free-standing nanocrystals isolated in vacuum. By using this novel approach for perovskite materials, we could directly obtain complete band alignment to vacuum of both CH3NH3PbBr3 nanocrystals and the ligands widely used in their preparation. We discuss the possible influence of the ligand molecules to apparent perovskite properties, and we compare the electronic properties of nanocrystals to those of bulk material. The experimental results were supported by DFT calculations.

5.
Colloids Surf B Biointerfaces ; 155: 341-348, 2017 Jul 01.
Article in English | MEDLINE | ID: mdl-28454063

ABSTRACT

The interaction of the tryptophan functionalized Ag nanoparticles and live Candida albicans cells was studied by synchrotron excitation deep-ultraviolet (DUV) fluorescence imaging at the DISCO beamline of Synchrotron SOLEIL. DUV imaging showed that incubation of the fungus with functionalized nanoparticles results in significant increase in the fluorescence signal. The analysis of the images revealed that the interaction of the nanoparticles with (pseudo)hyphae polymorphs of the diploid fungus was less pronounced than in the case of yeast cells or budding spores. The changes in the intensity of the fluorescence signals of the cells after incubation were followed in [327-353nm] and [370-410nm] spectral ranges that correspond to the fluorescence of tryptophan in non-polar and polar environment, respectively. As a consequence of the environmental sensitivity of the silver-tryptophan fluorescent nanoprobe, we were able to determine the possible accumulation sites of the nanoparticles. The analysis of the intensity decay kinetics showed that the photobleaching effects were more pronounced in the case of the functionalized nanoparticle treated cells. The results of time-integrated emission in the mentioned spectral ranges suggested that the nanoparticles penetrate the cells, but that the majority of the nanoparticles attach to the cells' surfaces.


Subject(s)
Antifungal Agents/pharmacology , Candida albicans/drug effects , Hyphae/drug effects , Metal Nanoparticles/chemistry , Silver/pharmacology , Spores, Fungal/drug effects , Antifungal Agents/chemistry , Antifungal Agents/metabolism , Candida albicans/growth & development , Candida albicans/metabolism , Candida albicans/ultrastructure , Hyphae/growth & development , Hyphae/metabolism , Hyphae/ultrastructure , Kinetics , Optical Imaging/methods , Silver/chemistry , Silver/metabolism , Spores, Fungal/growth & development , Spores, Fungal/metabolism , Spores, Fungal/ultrastructure , Synchrotrons , Tryptophan/chemistry , Ultraviolet Rays
6.
Colloids Surf B Biointerfaces ; 135: 742-750, 2015 Nov 01.
Article in English | MEDLINE | ID: mdl-26340364

ABSTRACT

Biocompatible fluorescent nanostructures were prepared by a functionalization of gold nanoparticles with the amino acid tryptophan. The gold-tryptophan bioconjugates were investigated by TEM and HRTEM and various spectroscopy methods (XPS, FTIR, UV-vis and photoluminescence). It was found that the gold nanoparticles, initially 8 nm in diameter, aggregate in the presence of the amino acid. From the XPS and FTIR spectroscopy results, it was concluded that the tryptophan gold interactions mainly take place via indole and carboxyl groups. Although the indole group is involved in the interaction with the gold surfaces, the tryptophan-gold hybrids showed strong fluorescence due to the presence of multilayers of tryptophan. Deep ultra violet (DUV) imaging performed at the SOLEIL synchrotron showed that it is possible to detect these hybrid nanostructures within Escherichia coli cells.


Subject(s)
Escherichia coli/chemistry , Gold/chemistry , Metal Nanoparticles , Spectrophotometry, Ultraviolet/methods , Tryptophan/chemistry , Microscopy, Electron, Transmission
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