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1.
Sci Total Environ ; 872: 162142, 2023 May 10.
Article in English | MEDLINE | ID: mdl-36764542

ABSTRACT

The development of benthic cyanobacteria currently raises concern worldwide because of their potential to produce toxins. As a result, understanding which measures of biotic and abiotic parameters influence the development of cyanobacterial assemblages is of great importance to guide management actions. In this study, we investigate the relative contributions of abiotic and biotic parameters that may drive the development of cyanobacterial assemblages in river biofilms. First, a 2D hydrodynamic model allowed us to retrace changes in depths and velocities according to discharge at a 4 m2 resolution. From this model, we set up three hydraulic zones in each of the 4 reaches investigated along a 50-km-long river stretch. We further used univariate, multivariate and variance partitioning analyses to assess the contribution of past and present hydraulics, present physical and chemical parameters and algae to the temporal variability of cyanobacterial assemblage composition. The cyanobacterial assemblages were generally dominated by Phormidium sp., Lyngbya sp., Planktolyngbya sp. and Oscillatoria sp., four genera known to contain potentially toxic species. The highest biovolumes of cyanobacteria were present in low velocity zones in early summer and shifted to high velocity zones in late summer, highlighting the major influence of hydraulic parameters on benthic cyanobacteria settlement and development in rivers. Considering the identified genera, biofilms present a potentially high risk of toxin production. Relations between cyanobacterial development, toxin production and environmental parameters need to be further assessed to better estimate this risk.


Subject(s)
Cyanobacteria , Rivers , Rivers/chemistry , Cyanobacteria Toxins , Biofilms
2.
Sci Total Environ ; 773: 145061, 2021 Jun 15.
Article in English | MEDLINE | ID: mdl-33940713

ABSTRACT

Few studies have addressed how the diversity of basal resources change with stream regulation and the potential consequences on river biota. We sampled invertebrates above and below a series of dams, over two years, at both downwelling and upwelling zones. In each zone, we recorded the daily temperature and flow variations, estimated the algal development, measured the available resources, and analysed carbon and nitrogen stable isotope compositions of the invertebrate community. The number of hydrological pulses were typically higher below the dams than above the dams especially during high-flow periods whereas the groundwater outlets had minor effects on invertebrate assemblages. Invertebrate abundance, richness and diversity tended to decrease below the dams. Co-inertia analysis showed that flow and temperature variations, and eutrophication explained most of the variance in the invertebrate assemblages, which comprised a higher number of resilient taxa below than above the dams. The proportions of pesticide-sensitive invertebrates were lower below the dams and ovoviviparous and more generalist taxa were prominent. We did not observe the expected CPOM decrease and FPOM increase downstream. Accordingly, the proportions of each functional feeding group were remarkably similar above and below the dams despite the long distance between the sectors (>100 kms). The diversity of basal resources used within assemblages progressively increased downstream above dams. In contrast, the diversity of resources used by organisms below the dams decreased from upstream to downstream suggesting a significant influence of flow regulation on aquatic food webs. Finally, the shorter trophic chains for the invertebrate assemblages below the dams suggests that the effects of stream regulation and eutrophication induced a simplification of food webs. To our knowledge, this study is the first to connect taxonomic and functional trait changes in response to multiple stressors with the associated modifications in isotopic niches within aquatic invertebrate assemblages. CONTEXT: Understanding how stream regulation and associated anthropogenic pressures act on aquatic assemblages and trophic niches is necessary to guide management actions. GOAL: We aimed to investigate the functional responses (traits and trophic niches) of aquatic invertebrate assemblages to stream regulation and eutrophication. METHODS: We used univariate and multivariate analyses to compare the invertebrate assemblages above and below the dams and to assess the contributions of hydrology (including groundwater supplies to the river), temperature and eutrophication to the variability in the composition of invertebrate assemblages. We also considered the relative utilization of a selected set of traits describing invertebrate resilience, resistance and specialization to address the potential functional effects of stream regulation on invertebrate assemblages. Finally, carbon and nitrogen isotope analyses allowed us to characterize the length and width of invertebrate assemblage food webs as related to the availability and diversity of basal resources. RESULTS: Invertebrate abundance and richness generally decreased below the dams, with the highest impacts on insect taxa. Co-inertia analysis showed that stream regulation and eutrophication were main drivers of the aquatic invertebrate assemblages. The analysis separated the sites above and below the dams according to flow and temperature variation, whereas eutrophication appeared as a secondary stressor that separated the sites within each sector. Furthermore, the series of dams resulted in (i) a higher proportion of resilient (e.g., multivoltine) and resistant (ovoviviparous) taxa and a majority of generalists in assemblages below dams, (ii) an impact on the classical dynamics of CPOM (decrease) and FPOM (increase) sources from upstream to downstream, and (iii) a reduction in the diversity of resource use and in the trophic chain length of invertebrate assemblages below dams. The cooler and less oxygenated upwelling zones had lower invertebrate abundance; however, contrary to our expectation, the variation in the groundwater supply did not affect the composition of epigean invertebrate assemblages. CONCLUSION: This study provides insights about the impacts of flow regime alteration and eutrophication on food webs that may have been caused by regulation of permanent streams. To our knowledge, this is the first to connect taxonomic and functional trait changes in response to multiple stressors with the associated modifications in energy fluxes in aquatic invertebrate assemblages. This study suggests that bed stability, which is associated with a reduction in channel mobility below the dams and with moderate eutrophication, may provide the shelter and resources that can locally favour invertebrate assemblage dynamics and lessen the effects of flow regulation. In addition, the study suggests that the biological trait-based approach and isotope analysis are complementary approaches for addressing ecosystem functioning. The relative utilization of traits indicates the functional potential of aquatic invertebrate assemblages to face multiple stressors whereas isotope analysis is an expression of the actual effect of the stressors on the trophic structure of aquatic invertebrate assemblages.


Subject(s)
Ecosystem , Invertebrates , Animals , Food Chain , Hydrology , Rivers
3.
Sci Total Environ ; 766: 144044, 2021 Apr 20.
Article in English | MEDLINE | ID: mdl-33421783

ABSTRACT

Seasonal hydrological variation and chemical pollution represent two main drivers of freshwater biodiversity change in Mediterranean rivers. We investigated to what extent low flow conditions can modify the effects of chemical pollution on macroinvertebrate communities. To that purpose, we selected twelve sampling sites in the upper Tagus river basin (central Spain) having different sources of chemical pollution and levels of seasonal hydrological variation. The sites were classified as natural (high flow variation, low chemical impact), agricultural (high flow variation, high agricultural chemical inputs) and urban (limited flow variation, high urban chemical inputs). In these sites, we measured daily water discharge, nutrients, and contaminant concentrations, and we sampled benthic macroinvertebrates, in spring, summer and autumn. Significant differences related to toxic pressure and nutrient concentrations were observed between the three groups of sites. Seasonal patterns were found for some water quality parameters (e.g. nitrites, ammonia, suspended solids, metal toxicity), particularly in agricultural sites. Taxonomic and functional richness were slightly lower in the polluted sites (agricultural and urban), particularly during low flow periods (summer and early autumn). Functional diversity was significantly lower in sites with seasonal flow variation (agricultural sites) as compared to the more constant ones (urban sites). The frequency of traits such as large size, asexual reproduction, aquatic passive dispersion and the production of cocoons increased in response to pollution during low flow periods. This study shows that the impacts of anthropogenic chemical pollution on taxonomic and functional characteristics of macroinvertebrate communities seem to be larger during low flow periods. Therefore, further studies and monitoring campaigns assessing the effects of chemical pollution within these periods are recommended.


Subject(s)
Invertebrates , Rivers , Animals , Environmental Monitoring , Spain , Water Quality
4.
Sci Total Environ ; 742: 140543, 2020 Nov 10.
Article in English | MEDLINE | ID: mdl-32721725

ABSTRACT

Rivers suffer from more severe decreases in species diversity compared to other aquatic and terrestrial ecosystems due to a variety of pressures related to human activities. Species provide different roles in the functioning of the ecosystem, and their loss may reduce the capacity of the ecosystems to respond to multiple stressors. The effects on diversity will differ based on the type, combination and severity of stressors, as well as on the characteristics of the community composition and tolerance. Multiple trait-based approaches (MTBAs) can help to unravel the effects of multiple stressors on communities, providing a mechanistic interpretation, and, thus, complementing traditional biodiversity assessments using community structure. We studied the relationships between diversity indexes and trait composition of macroinvertebrate and diatom communities, as well as environmental variables that described the hydrological and geomorphological alterations and toxic pollution (pesticides and pharmaceuticals) of three different European river basins: the Adige, the Sava, and the Evrotas. These river basins can be considered representative cases of different situations in European freshwater systems. Hydrological variables were the main drivers determining the community structure and function in the rivers, for both diatoms and macroinvertebrates. For diatom communities, pharmaceutical active compound (PhAC) toxic units were also identified as a very important driver of diversity changes, explaining up to 57% of the variance in taxonomic richness. For macroinvertebrates, river geomorphology was an important driver of structural changes, particularly affecting Plecoptera richness. In addition, PhAC and pesticide toxic units were also identified as stressors for macroinvertebrate communities. MTBA provided a detailed picture of the effects of the stressors on the communities and confirmed the importance of hydrological variables in shaping the functional attributes of the communities.


Subject(s)
Diatoms , Rivers , Animals , Biodiversity , Ecosystem , Environmental Monitoring , Invertebrates
6.
Sci Data ; 7(1): 6, 2020 01 08.
Article in English | MEDLINE | ID: mdl-31913312

ABSTRACT

The use of functional information in the form of species traits plays an important role in explaining biodiversity patterns and responses to environmental changes. Although relationships between species composition, their traits, and the environment have been extensively studied on a case-by-case basis, results are variable, and it remains unclear how generalizable these relationships are across ecosystems, taxa and spatial scales. To address this gap, we collated 80 datasets from trait-based studies into a global database for metaCommunity Ecology: Species, Traits, Environment and Space; "CESTES". Each dataset includes four matrices: species community abundances or presences/absences across multiple sites, species trait information, environmental variables and spatial coordinates of the sampling sites. The CESTES database is a live database: it will be maintained and expanded in the future as new datasets become available. By its harmonized structure, and the diversity of ecosystem types, taxonomic groups, and spatial scales it covers, the CESTES database provides an important opportunity for synthetic trait-based research in community ecology.


Subject(s)
Biota , Animals , Biodiversity , Ecology , Plants
7.
Environ Pollut ; 252(Pt A): 483-492, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31158676

ABSTRACT

Urban wastewater effluents bring large amounts of nutrients, organic matter and organic microcontaminants into freshwater ecosystems. The effects of this complex mixture of pollutants on freshwater invertebrates have been studied mainly in temperate rivers and streams with high dilution capacities. In contrast, Mediterranean streams and rivers have lower dilution capacities especially during the seasonal drought, and are therefore exposed to high concentrations of pollutants. Here, we assess the effects of urban wastewater pollution on invertebrate communities from Mediterranean streams under different hydrological conditions. Specifically, we assessed the invertebrates taxonomic composition and functional biological traits in 12 streams, differing in stream and substrate size (sand or cobbles), under low (2 surveys) and baseflow (1 survey) conditions. In each stream, we selected reaches both upstream and downstream of the wastewater discharge point. Our results indicate that urban wastewater pollution favours the most tolerant invertebrate taxa and homogenises functional trait composition over time. Changes in functional traits were more evident during the seasonal drought, when the low flow conditions at the upstream and downstream sites were more severe and, pollutant concentrations downstream were at their highest. However, the effects of urban wastewater pollution were not uniform in the downstream sites; as local invertebrate communities differed in according to the river substrate and stream size (i.e., width and discharge). Overall, urban pollution caused by wastewater enhanced both, taxonomic and functional differences between the invertebrate communities. Such an absence of homogenisation among wastewater pollution impacted sites was probably related to the relevant role of stream substrate-size as well flow conditions in the rivers receiving the impact. These are attributes that need to be considered when setting the pollutant discharge limits in rivers and streams receiving effluents.


Subject(s)
Environmental Monitoring , Invertebrates/drug effects , Rivers/chemistry , Wastewater/chemistry , Water Pollution/analysis , Animals , Ecosystem , Geologic Sediments/chemistry , Invertebrates/classification
8.
Conserv Biol ; 32(6): 1380-1391, 2018 12.
Article in English | MEDLINE | ID: mdl-30113727

ABSTRACT

Assessing how much management of agricultural landscapes, in addition to protected areas, can offset biodiversity erosion in the tropics is a central issue for conservation that still requires cross-taxonomic and landscape-scale studies. We measured the effects of Amazonia deforestation and subsequent land-use intensification in 6 agricultural areas (landscape scale), where we sampled plants and 4 animal groups (birds, earthworms, fruit flies, and moths). We assessed land-use intensification with a synthetic index based on landscape metrics (total area and relative percentages of land uses, edge density, mean patch density and diversity, and fractal structures at 5 dates from 1990 to 2007). Species richness decreased consistently as agricultural intensification increased despite slight differences in the responses of sampled groups. Globally, in moderately deforested landscapes species richness was relatively stable, and there was a clear threshold in biodiversity loss midway along the intensification gradient, mainly linked to a drop in forest cover and quality. Our results suggest anthropogenic landscapes with high-quality forest covering >40 % of the surface area may prevent biodiversity loss in Amazonia.


Subject(s)
Biodiversity , Conservation of Natural Resources , Agriculture , Animals , Brazil , Forests
9.
Sci Total Environ ; 613-614: 1353-1366, 2018 Feb 01.
Article in English | MEDLINE | ID: mdl-28973847

ABSTRACT

Ecological criteria are needed for a comprehensive evaluation of groundwater ecosystem health by including biological components with the physical and chemical properties that are already required by European directives. Two methodological approaches to assess the ecological status of groundwater ecosystems were combined in two alluvial plains (the Ariège and Hers Rivers, southwestern France) varying in agriculture intensity (from grassland to crop rotation including maize and sunflower, and to maize monoculture). In the first approach, the composition of invertebrate assemblages (only obligate-groundwater crustaceans, i.e. stygobionts) sampled in 28 wells differing in their land use contexts was analysed. Abundance, species richness, and assemblage composition significantly changed with agricultural land use or urbanization around the wells. In the second approach, we tested an in situ exposure of sentinel organisms to quantify their response to the environmental pressures. The epigean and native amphipod species Gammarus cf. orinos was used as the sentinel species. Amphipods (30 individuals in each of 10 wells) were exposed for one week to the in situ conditions at two seasons with contrasted concentrations of pollutants. The Ecophysiological Index (EPI) synthetizing the survival rates and energetic storage decreased in wells with low oxygen and high nitrate concentrations, but only during the highest contamination period. Atrazine-related compounds negatively impacted sentinel health whatever the season. The combination of these two approaches may have major applications for orientating groundwater ecosystem management.

10.
PeerJ ; 5: e3364, 2017.
Article in English | MEDLINE | ID: mdl-28560109

ABSTRACT

The ecological niche concept has regained interest under environmental change (e.g., climate change, eutrophication, and habitat destruction), especially to study the impacts on niche shift and conservatism. Here, we propose the within outlying mean indexes (WitOMI), which refine the outlying mean index (OMI) analysis by using its properties in combination with the K-select analysis species marginality decomposition. The purpose is to decompose the ecological niche into subniches associated with the experimental design, i.e., taking into account temporal and/or spatial subsets. WitOMI emphasize the habitat conditions that contribute (1) to the definition of species' niches using all available conditions and, at the same time, (2) to the delineation of species' subniches according to given subsets of dates or sites. The latter aspect allows addressing niche dynamics by highlighting the influence of atypical habitat conditions on species at a given time and/or space. Then, (3) the biological constraint exerted on the species subniche becomes observable within Euclidean space as the difference between the existing fundamental subniche and the realized subniche. We illustrate the decomposition of published OMI analyses, using spatial and temporal examples. The species assemblage's subniches are comparable to the same environmental gradient, producing a more accurate and precise description of the assemblage niche distribution under environmental change. The WitOMI calculations are available in the open-access R package "subniche."

11.
Environ Monit Assess ; 189(7): 326, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28600682

ABSTRACT

In freshwater ecosystems, Chironomidae are currently considered indicators of poor water quality because the family is often abundant in degraded sites. However, it incorporates taxa with a large ecological and physiological diversity and different sensitivity to impairment. Yet, the usual identification of Chironomidae at coarse taxonomic levels (family or subfamily) masks genus and species sensitivities. In this study, we investigate the potential of taxonomic and functional (traits) composition of Chironomidae to detect anthropogenic disturbance. In this context, we tested some a priori hypotheses regarding the ability of Chironomidae taxonomic and trait compositions to discriminate Mediterranean streams affected by multiple stressors from least-disturbed streams. Both taxonomic and Eltonian trait composition discriminated sites according to their disturbance level. Disturbance resulted in the predicted increase of Chironomidae with higher number of stages with hibernation/diapause and of taxa with resistance forms and unpredicted increase of the proportion of taxa with longer life cycles and few generations per year. Life history strategies (LHS), corresponding to multivoltine Chironomidae that do not invest in hemoglobin and lack strong spring synchronization, were well adapted to all our Mediterranean sites with highly changeable environmental conditions. Medium-size animals favored in disturbed sites where the Mediterranean hydrological regime is altered, but the reduced number of larger-size/carnivore Chironomids suggests a limitation to secondary production. Results indicate that Chironomidae genus and respective traits could be a useful tool in the structural and functional assessment of Mediterranean streams. The ubiquitous nature of Chironomidae should be also especially relevant in the assessment of water bodies naturally poor in other groups such as the Ephemeroptera, Plecoptera, and Trichoptera, such as the lowland rivers with sandy substrates, lakes, or reservoirs.


Subject(s)
Chironomidae/physiology , Environmental Monitoring/methods , Animals , Ecosystem , Life History Traits , Phenotype , Rivers/chemistry , Seasons , Water Quality
12.
Sci Total Environ ; 599-600: 1912-1921, 2017 Dec 01.
Article in English | MEDLINE | ID: mdl-28545218

ABSTRACT

CONTEXT: Understanding natural temporal changes in Mediterranean rivers with contrasting flow regimes in relation to those of temperate rivers may prove helpful in predicting effects of climate change on aquatic biodiversity. GOAL: We aimed to compare temporal variability in taxonomic and trait compositions of nearly natural rivers in two climatic regions with varying flow regimes to address the effects of future climate changes on aquatic biodiversity in reference conditions. METHODS: We analysed taxonomic and biological trait compositions using the Foucard multivariate method to compare within-site temporal variability levels and the evolution of within-date spatial variability patterns. In addition, we assessed the effects of temporal variability levels on taxonomic and functional diversity and on community specialization. RESULTS: Our results reveal (i) highly fluctuating environments of the Mediterranean region, particularly in intermittent rivers, which lead to higher levels of temporal variability in both taxonomic and trait compositions of benthic invertebrate assemblages, with marked synchrony in Mediterranean streams linked to contrasting flow characteristics; (ii) higher degrees of taxonomic richness associated with higher levels of functional diversity in Mediterranean rivers relative to temperate rivers, (iii) higher temporal stability for functional diversity and trait compositions of benthic invertebrate assemblages than for taxonomic richness and compositions; and (iv) a recovery of all diversity metrics following drying events in intermittent sites. CONCLUSION: This study offers insight into a rarely addressed question concerning the temporal variability of trait compositions in benthic invertebrate assemblages among rivers differing in terms of flow regimes. It suggests that temperate rivers will experience higher levels of temporal variability in terms of taxonomic and trait compositions under future climatic change scenarios, even in sites that will remain perennial, resulting in higher levels of taxonomic and functional diversity. This lack of temporal stability in least-disturbed situations should be taken into account when developing bioassessment tools based on reference conditions.


Subject(s)
Biodiversity , Climate Change , Environmental Monitoring , Invertebrates/classification , Rivers , Animals , Mediterranean Region , Time Factors
13.
Environ Res ; 156: 485-493, 2017 07.
Article in English | MEDLINE | ID: mdl-28415043

ABSTRACT

We used the trait composition of macroinvertebrate communities to identify the effects of pesticides and multiple stressors associated with urban land use at different sites of four rivers in Spain. Several physical and chemical stressors (high metal pollution, nutrients, elevated temperature and flow alterations) affected the urban sites. The occurrence of multiple stressors influenced aquatic assemblages at 50% of the sites. We hypothesized that the trait composition of macroinvertebrate assemblages would reflect the strategies that the assemblages used to cope with the respective environmental stressors. We used RLQ and fourth corner analysis to address the relationship between stressors and the trait composition of benthic macroinvertebrates. We found a statistically significant relationship between the trait composition and the exposure of assemblages to environmental stressors. The first RLQ dimension, which explained most of the variability, clearly separated sites according to the stressors. Urban-related stressors selected taxa that were mainly plurivoltine and fed on deposits. In contrast, pesticide impacted sites selected taxa with high levels of egg protection (better egg survival), indicating a potentially higher risk for egg mortality. Moreover, the trait diversity of assemblages at urban sites was low compared to that observed in pesticide impacted sites, suggesting the homogenization of assemblages in urban areas.


Subject(s)
Biodiversity , Environmental Monitoring , Invertebrates/physiology , Rivers/chemistry , Water Pollutants, Chemical/toxicity , Animals , Invertebrates/drug effects , Spain
14.
Sci Total Environ ; 572: 196-206, 2016 Dec 01.
Article in English | MEDLINE | ID: mdl-27498381

ABSTRACT

CONTEXT: Multiple stressors constitute a serious threat to aquatic ecosystems, particularly in the Mediterranean region where water scarcity is likely to interact with other anthropogenic stressors. Biological traits potentially allow the unravelling of the effects of multiple stressors. However, thus far, trait-based approaches have failed to fully deliver on their promise and still lack strong predictive power when multiple stressors are present. GOAL: We aimed to quantify specific community tolerances against six anthropogenic stressors and investigate the responses of the underlying macroinvertebrate biological traits and their combinations. METHODS: We built and calibrated boosted regression tree models to predict community tolerances using multiple biological traits with a priori hypotheses regarding their individual responses to specific stressors. We analysed the combinations of traits underlying community tolerance and the effect of trait association on this tolerance. RESULTS: Our results validated the following three hypotheses: (i) the community tolerance models efficiently and robustly related trait combinations to stressor intensities and, to a lesser extent, to stressors related to the presence of dams and insecticides; (ii) the effects of traits on community tolerance not only depended on trait identity but also on the trait associations emerging at the community level from the co-occurrence of different traits in species; and (iii) the community tolerances and the underlying trait combinations were specific to the different stressors. CONCLUSION: This study takes a further step towards predictive tools in community ecology that consider combinations and associations of traits as the basis of stressor tolerance. Additionally, the community tolerance concept has potential application to help stream managers in the decision process regarding management options.


Subject(s)
Environmental Monitoring/methods , Invertebrates/physiology , Life History Traits , Rivers/chemistry , Water Pollutants, Chemical/adverse effects , Animals , Spain
15.
Sci Total Environ ; 503-504: 3-9, 2015 Jan 15.
Article in English | MEDLINE | ID: mdl-25005236

ABSTRACT

Water scarcity is a serious environmental problem in many European regions, and will likely increase in the near future as a consequence of increased abstraction and climate change. Water scarcity exacerbates the effects of multiple stressors, and thus results in decreased water quality. It impacts river ecosystems, threatens the services they provide, and it will force managers and policy-makers to change their current practices. The EU-FP7 project GLOBAQUA aims at identifying the prevalence, interaction and linkages between stressors, and to assess their effects on the chemical and ecological status of freshwater ecosystems in order to improve water management practice and policies. GLOBAQUA assembles a multidisciplinary team of 21 European plus 2 non-European scientific institutions, as well as water authorities and river basin managers. The project includes experts in hydrology, chemistry, biology, geomorphology, modelling, socio-economics, governance science, knowledge brokerage, and policy advocacy. GLOBAQUA studies six river basins (Ebro, Adige, Sava, Evrotas, Anglian and Souss Massa) affected by water scarcity, and aims to answer the following questions: how does water scarcity interact with other existing stressors in the study river basins? How will these interactions change according to the different scenarios of future global change? Which will be the foreseeable consequences for river ecosystems? How will these in turn affect the services the ecosystems provide? How should management and policies be adapted to minimise the ecological, economic and societal consequences? These questions will be approached by combining data-mining, field- and laboratory-based research, and modelling. Here, we outline the general structure of the project and the activities to be conducted within the fourteen work-packages of GLOBAQUA.


Subject(s)
Conservation of Natural Resources/methods , Ecosystem , Water Quality/standards , Water Supply , Climate Change , Models, Theoretical
16.
Ecology ; 95(1): 14-21, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24649641

ABSTRACT

Assessing trait responses to environmental gradients requires the simultaneous analysis of the information contained in three tables: L (species distribution across samples), R (environmental characteristics of samples), and Q (species traits). Among the available methods, the so-called fourth-corner and RLQ methods are two appealing alternatives that provide a direct way to test and estimate trait-nvironment relationships. Both methods are based on the analysis of the fourth-corner matrix, which crosses traits and environmental variables weighted by species abundances. However, they differ greatly in their outputs: RLQ is a multivariate technique that provides ordination scores to summarize the joint structure among the three tables, whereas the fourth-corner method mainly tests for individual trait-environment relationships (i.e., one trait and one environmental variable at a time). Here, we illustrate how the complementarity between these two methods can be exploited to promote new ecological knowledge and to improve the study of trait-environment relationships. After a short description of each method, we apply them to real ecological data to present their different outputs and provide hints about the gain resulting from their combined use.


Subject(s)
Adaptation, Physiological/physiology , Ecosystem , Models, Biological , Plants/classification , Altitude , Phytochemicals , Snow
17.
Environ Pollut ; 157(3): 1011-8, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19028003

ABSTRACT

In developed countries, changes in agriculture practices have greatly accelerated the degradation of the landscape and the functioning of adjacent aquatic ecosystems. Such alteration can in turn impair the services provided by aquatic ecosystems, namely the decomposition of organic matter, a key process in most small streams. To study this alteration, we recorded three measures of heterotrophic activity corresponding to microbial hydrolasic activity (FDA hydrolysis) and leaf litter breakdown rates with (k(c)) and without invertebrates (k(f)) along a gradient of contrasted agricultural pressures. Hydrolasic activity and k(f) reflect local/microhabitat conditions (i.e. nutrient concentrations and organic matter content of the sediment) but not land use while k(c) reflects land-use conditions. k(c), which is positively correlated with the biomass of Gammaridae, significantly decreased with increasing agricultural pressure, contrary to the taxonomic richness and biomass of Trichoptera and Plecoptera. Gammaridae may thus be considered a key species for organic matter recycling in agriculture-impacted streams.


Subject(s)
Agriculture , Heterotrophic Processes/physiology , Invertebrates/metabolism , Soil Microbiology , Water Pollutants, Chemical/analysis , Water/chemistry , Animals , Ecology/methods , Fagus , France , Humic Substances , Hydrolases/metabolism , Nitrates/analysis , Nitrites/analysis , Phosphorus/analysis , Quaternary Ammonium Compounds/analysis , Rivers
18.
Mol Ecol Resour ; 9(5): 1418-21, 2009 Sep.
Article in English | MEDLINE | ID: mdl-21564925

ABSTRACT

We characterized the first microsatellite markers for Gammarus fossarum. Eight loci gave satisfactory amplification patterns in two stream populations (Southern France) with number of alleles ranging from 2 to 10 and expected heterozygosity from 0.076 to 0.857. We performed cross-amplification in two closely related gammarid species, Gammarus pulex and Gammarus orinos. Among the eight tested microsatellite loci, four correctly amplified in G. pulex and three in G. orinos.

19.
Oecologia ; 156(1): 65-73, 2008 May.
Article in English | MEDLINE | ID: mdl-18270744

ABSTRACT

Is there a relationship between the abundance of organisms and particular biological attributes? To assess this old, yet still acutely debated key question of ecology, we have used large databases on 312 stream macroinvertebrate genera (from 27 orders) that describe (1) invertebrate abundance at 527 least human-impacted European stream sites, (2) 11 biological traits (size, life-history, food, among others) described in 61 biological trait categories (BTCs; e.g. small, intermediate or large size) and (3) 14 attributes indicating specialization (AISs; e.g. species richness, size and food diversity). We applied interactive procedures to obtain models (for BTCs, AISs and a mixture of both descriptions) explaining as much as possible of the abundance variability of the genera with the lowest number of significant and ecologically meaningful attributes and assessed the predictive power of these models (in crosswise validations) by comparing predicted and observed abundances. Mean European invertebrate abundance increased with BTC affinities favouring viability in stream systems (e.g. attachment to the stream bottom to resist the flow, aquatic passive dispersal with the flow, exploitation of abundant food sources) and decreased with BTC affinities disfavouring this viability (e.g. drag force increase associated with larger body size, flow exposure associated with aerial respiration). Abundance consistently decreased with specialization of the genera (e.g. low species richness, oddity of their overall BTC profile from an "average" European genus). The model including a mixture of a few BTCs and AISs had the greatest predictive power: it predicted 35% of the observed abundance (ln-transformed) variability of the genera; these predictions were marginally affected by taxonomy (using orders as categorical variables). We conclude that a better appreciation of the influence of the examined taxonomic diversity, number and type of biological attributes, environmental system and spatial scale could enable abundance predictions using different sets of biological attributes for different taxonomic groups and systems.


Subject(s)
Invertebrates , Rivers , Animals , Biodiversity , Body Size , Databases, Factual , Europe , Feeding Behavior , Forecasting , Invertebrates/anatomy & histology , Invertebrates/physiology , Population Density
20.
C R Biol ; 327(1): 29-36, 2004 Jan.
Article in English | MEDLINE | ID: mdl-15015753

ABSTRACT

Multitable techniques are rarely used for investigating patterns in ecological data surveys despite their ability to deal with the spatial and/or temporal stability of assemblages. Based on a covariance optimisation criterion, Multiple Co-inertia analysis (MCOA) enables the simultaneous ordination of several tables. Such analysis allows the representation of the stable vs. unstable part of the assemblage structure in comparison to a reference derived from each table. We used MCOA on multiple time series of invertebrate sampling to show that synchrony in the temporal variability of communities can establish between geographically distant locations despite the spatial and temporal plasticity of the faunistic responses to long-term changes in environmental conditions.


Subject(s)
Ecosystem , Animals , Ecology/statistics & numerical data , France , Fresh Water , Invertebrates , Time Factors
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