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1.
Sci Adv ; 8(28): eabn1382, 2022 Jul 15.
Article in English | MEDLINE | ID: mdl-35857500

ABSTRACT

High-risk neuroblastoma, a pediatric tumor originating from the sympathetic nervous system, has a low mutation load but highly recurrent somatic DNA copy number variants. Previously, segmental gains and/or amplifications allowed identification of drivers for neuroblastoma development. Using this approach, combined with gene dosage impact on expression and survival, we identified ribonucleotide reductase subunit M2 (RRM2) as a candidate dependency factor further supported by growth inhibition upon in vitro knockdown and accelerated tumor formation in a neuroblastoma zebrafish model coexpressing human RRM2 with MYCN. Forced RRM2 induction alleviates excessive replicative stress induced by CHK1 inhibition, while high RRM2 expression in human neuroblastomas correlates with high CHK1 activity. MYCN-driven zebrafish tumors with RRM2 co-overexpression exhibit differentially expressed DNA repair genes in keeping with enhanced ATR-CHK1 signaling activity. In vitro, RRM2 inhibition enhances intrinsic replication stress checkpoint addiction. Last, combinatorial RRM2-CHK1 inhibition acts synergistic in high-risk neuroblastoma cell lines and patient-derived xenograft models, illustrating the therapeutic potential.

2.
J Pers Med ; 11(9)2021 Aug 30.
Article in English | MEDLINE | ID: mdl-34575646

ABSTRACT

Cancer immunotherapy has transformed the landscape of adult cancer treatment and holds a great promise to treat paediatric malignancies. However, in vitro test coculture systems to evaluate the efficacy of immunotherapies on representative paediatric tumour models are lacking. Here, we describe a detailed procedure for the establishment of an ex vivo test coculture system of paediatric tumour organoids and immune cells that enables assessment of different immunotherapy approaches in paediatric tumour organoids. We provide a step-by-step protocol for an efficient generation of patient-derived diffuse intrinsic pontine glioma (DIPG) and neuroblastoma organoids stably expressing eGFP-ffLuc transgenes using defined serum-free medium. In contrast to the chromium-release assay, the new platform allows for visualization, monitoring and robust quantification of tumour organoid cell cytotoxicity using a non-radioactive assay in real-time. To evaluate the utility of this system for drug testing in the paediatric immuno-oncology field, we tested our in vitro assay using a clinically used immunotherapy strategy for children with high-risk neuroblastoma, dinutuximab (anti-GD2 monoclonal antibody), on GD2 proficient and deficient patient-derived neuroblastoma organoids. We demonstrated the feasibility and sensitivity of our ex vivo coculture system using human immune cells and paediatric tumour organoids as ex vivo tumour models. Our study provides a novel platform for personalized testing of potential anticancer immunotherapies for aggressive paediatric cancers such as neuroblastoma and DIPG.

3.
Eur J Cancer ; 136: 52-68, 2020 09.
Article in English | MEDLINE | ID: mdl-32653773

ABSTRACT

Only one class of targeted agents (anti-GD2 antibodies) has been incorporated into front-line therapy for neuroblastoma since the 1980s. The Neuroblastoma New Drug Development Strategy (NDDS) initiative commenced in 2012 to accelerate the development of new drugs for neuroblastoma. Advances have occurred, with eight of nine high-priority targets being evaluated in paediatric trials including anaplastic lymphoma kinase inhibitors being investigated in front-line, but significant challenges remain. This article reports the conclusions of the second NDDS forum, which expanded across the Atlantic to further develop the initiative. Pre-clinical and clinical data for 40 genetic targets and mechanisms of action were prioritised and drugs were identified for early-phase trials. Strategies to develop drugs targeting TERT, telomere maintenance, ATRX, alternative lengthening of telomeres (ALT), BRIP1 and RRM2 as well as direct targeting of MYCN are high priority and should be championed for drug discovery. Promising pre-clinical data suggest that targeting of ALT by ATM or PARP inhibition may be potential strategies. Drugs targeting CDK2/9, CDK7, ATR and telomere maintenance should enter paediatric clinical development rapidly. Optimising the response to anti-GD2 by combinations with chemotherapy, targeted agents and other immunological targets are crucial. Delivering this strategy in the face of small patient cohorts, genomically defined subpopulations and a large number of permutations of combination trials, demands even greater international collaboration. In conclusion, the NDDS provides an internationally agreed, biologically driven selection of prioritised genetic targets and drugs. Improvements in the strategy for conducting trials in neuroblastoma will accelerate bringing these new drugs more rapidly to front-line therapy.


Subject(s)
Brain Neoplasms/drug therapy , Drug Development , Neuroblastoma/drug therapy , Antineoplastic Agents/isolation & purification , Antineoplastic Agents/therapeutic use , Brain Neoplasms/pathology , Child , Congresses as Topic , Drug Development/methods , Drug Development/organization & administration , Drug Development/trends , Drug Discovery/methods , Drug Discovery/organization & administration , Drug Discovery/trends , Europe , Humans , Medical Oncology/methods , Medical Oncology/organization & administration , Medical Oncology/trends , Molecular Targeted Therapy/methods , Molecular Targeted Therapy/trends , Neuroblastoma/pathology , Pediatrics/methods , Pediatrics/organization & administration , Pediatrics/trends , Protein Kinase Inhibitors/isolation & purification , Protein Kinase Inhibitors/therapeutic use , Therapies, Investigational/methods , Therapies, Investigational/trends
4.
Nat Commun ; 11(1): 1310, 2020 03 11.
Article in English | MEDLINE | ID: mdl-32161258

ABSTRACT

Kidney tumours are among the most common solid tumours in children, comprising distinct subtypes differing in many aspects, including cell-of-origin, genetics, and pathology. Pre-clinical cell models capturing the disease heterogeneity are currently lacking. Here, we describe the first paediatric cancer organoid biobank. It contains tumour and matching normal kidney organoids from over 50 children with different subtypes of kidney cancer, including Wilms tumours, malignant rhabdoid tumours, renal cell carcinomas, and congenital mesoblastic nephromas. Paediatric kidney tumour organoids retain key properties of native tumours, useful for revealing patient-specific drug sensitivities. Using single cell RNA-sequencing and high resolution 3D imaging, we further demonstrate that organoid cultures derived from Wilms tumours consist of multiple different cell types, including epithelial, stromal and blastemal-like cells. Our organoid biobank captures the heterogeneity of paediatric kidney tumours, providing a representative collection of well-characterised models for basic cancer research, drug-screening and personalised medicine.


Subject(s)
Biological Specimen Banks , Kidney Neoplasms/genetics , Kidney/pathology , Organoids/pathology , Adolescent , Carcinoma, Renal Cell/drug therapy , Carcinoma, Renal Cell/genetics , Carcinoma, Renal Cell/pathology , Cell Culture Techniques/methods , Child , Child, Preschool , DNA Methylation , Drug Screening Assays, Antitumor/methods , Female , Gene Expression Regulation, Neoplastic , Genetic Heterogeneity , Genotyping Techniques , Humans , Infant , Kidney Neoplasms/drug therapy , Kidney Neoplasms/pathology , Male , Nephroma, Mesoblastic/drug therapy , Nephroma, Mesoblastic/genetics , Nephroma, Mesoblastic/pathology , Netherlands , Precision Medicine/methods , RNA-Seq , Rhabdoid Tumor/drug therapy , Rhabdoid Tumor/genetics , Rhabdoid Tumor/pathology , Single-Cell Analysis , Transfection , Tumor Cells, Cultured , Whole Genome Sequencing , Wilms Tumor/drug therapy , Wilms Tumor/genetics , Wilms Tumor/pathology , Young Adult
5.
Oncogene ; 38(15): 2690-2705, 2019 04.
Article in English | MEDLINE | ID: mdl-30538293

ABSTRACT

ALK mutations occur in 10% of primary neuroblastomas and represent a major target for precision treatment. In combination with MYCN amplification, ALK mutations infer an ultra-high-risk phenotype resulting in very poor patient prognosis. To open up opportunities for future precision drugging, a deeper understanding of the molecular consequences of constitutive ALK signaling and its relationship to MYCN activity in this aggressive pediatric tumor entity will be essential. We show that mutant ALK downregulates the 'HMG-box transcription factor 1' (HBP1) through the PI3K-AKT-FOXO3a signaling axis. HBP1 inhibits both the transcriptional activating and repressing activity of MYCN, the latter being mediated through PRC2 activity. HBP1 itself is under negative control of MYCN through miR-17~92. Combined targeting of HBP1 by PI3K antagonists and MYCN signaling by BET- or HDAC-inhibitors blocks MYCN activity and significantly reduces tumor growth, suggesting a novel targeted therapy option for high-risk neuroblastoma.


Subject(s)
Anaplastic Lymphoma Kinase/genetics , High Mobility Group Proteins/genetics , N-Myc Proto-Oncogene Protein/genetics , Neuroblastoma/genetics , Repressor Proteins/genetics , Animals , Cell Line, Tumor , Cell Proliferation/genetics , Down-Regulation/genetics , Forkhead Box Protein O3/genetics , Gene Expression Regulation, Neoplastic/genetics , Humans , Mice , MicroRNAs/genetics , Mutation/genetics , Phosphatidylinositol 3-Kinases/genetics , Proto-Oncogene Proteins c-akt/genetics , Signal Transduction/genetics , Transcriptional Activation/genetics
6.
Nat Commun ; 9(1): 4866, 2018 11 19.
Article in English | MEDLINE | ID: mdl-30451831

ABSTRACT

Chromosome 17q gains are almost invariably present in high-risk neuroblastoma cases. Here, we perform an integrative epigenomics search for dosage-sensitive transcription factors on 17q marked by H3K27ac defined super-enhancers and identify TBX2 as top candidate gene. We show that TBX2 is a constituent of the recently established core regulatory circuitry in neuroblastoma with features of a cell identity transcription factor, driving proliferation through activation of p21-DREAM repressed FOXM1 target genes. Combined MYCN/TBX2 knockdown enforces cell growth arrest suggesting that TBX2 enhances MYCN sustained activation of FOXM1 targets. Targeting transcriptional addiction by combined CDK7 and BET bromodomain inhibition shows synergistic effects on cell viability with strong repressive effects on CRC gene expression and p53 pathway response as well as several genes implicated in transcriptional regulation. In conclusion, we provide insight into the role of the TBX2 CRC gene in transcriptional dependency of neuroblastoma cells warranting clinical trials using BET and CDK7 inhibitors.


Subject(s)
Brain Neoplasms/genetics , Forkhead Box Protein M1/genetics , Gene Expression Regulation, Neoplastic , Kv Channel-Interacting Proteins/genetics , N-Myc Proto-Oncogene Protein/genetics , Neuroblastoma/genetics , Repressor Proteins/genetics , T-Box Domain Proteins/genetics , Antineoplastic Agents/pharmacology , Azepines/pharmacology , Brain Neoplasms/drug therapy , Brain Neoplasms/metabolism , Brain Neoplasms/pathology , Cell Line, Tumor , Cell Survival/drug effects , Cyclin-Dependent Kinases/genetics , Cyclin-Dependent Kinases/metabolism , DNA Copy Number Variations , Epigenesis, Genetic , Forkhead Box Protein M1/metabolism , HEK293 Cells , Histones/genetics , Histones/metabolism , Humans , Kv Channel-Interacting Proteins/metabolism , N-Myc Proto-Oncogene Protein/metabolism , Neuroblastoma/drug therapy , Neuroblastoma/metabolism , Neuroblastoma/pathology , Organoids/drug effects , Organoids/metabolism , Organoids/pathology , Panobinostat/pharmacology , Phenylenediamines/pharmacology , Pyrimidines/pharmacology , Repressor Proteins/metabolism , Signal Transduction , T-Box Domain Proteins/metabolism , Triazoles/pharmacology , Tumor Suppressor Protein p53/genetics , Tumor Suppressor Protein p53/metabolism , Cyclin-Dependent Kinase-Activating Kinase
7.
Pharm Res ; 35(4): 85, 2018 Mar 07.
Article in English | MEDLINE | ID: mdl-29516187

ABSTRACT

PURPOSE: Sepantronium bromide (YM155) is a hydrophilic quaternary compound that cannot be administered orally due to its low oral bioavailability; it is furthermore rapidly eliminated via the kidneys. The current study aims at improving the pharmacokinetic profile of YM155 by its formulation in immunoliposomes that can achieve its enhanced delivery into tumor tissue and facilitate uptake in neuroblastoma cancer cells. METHODS: PEGylated YM155 loaded liposomes composed of DPPC, cholesterol and DSPE-PEG2000 were prepared via passive film-hydration and extrusion method. Targeted (i.e. immuno-)liposomes were prepared by surface functionalization with SATA modified monoclonal anti-disialoganglioside (GD2) antibodies. Liposomes were characterized based on their size, charge, antibody coupling and YM155 encapsulation efficiency, and stability. Flow cytometry analysis and confocal microscopy were performed on IMR32 and KCNR neuroblastoma cell lines. The efficacy of developed formulations were assessed by in-vitro toxicity assays. A pilot pharmacokinetic analysis was performed to assess plasma circulation and tumor accumulation profiles of the developed liposomal formulations. RESULTS: YM155 loaded immunoliposomes had a size of 170 nm and zeta potential of -10 mV, with an antibody coupling efficiency of 60% andYM155 encapsulation efficiency of14%. Targeted and control liposomal formulations were found to have similar YM155 release rates in a release medium containing 50% serum. An in-vitro toxicity study on KCNR cells showed less toxicity for immunoliposomes as compared to free YM155. In-vivo pharmacokinetic evaluation of YM155 liposomes showed prolonged blood circulation and significantly increased half-lives of liposomal YM155 in tumor tissue, as compared to a bolus injection of free YM155. CONCLUSIONS: YM155 loaded immunoliposomes were successfully formulated and characterized, and initial in-vivo results show their potential for improving the circulation time and tumor accumulation of YM155.


Subject(s)
Antineoplastic Agents/administration & dosage , Drug Compounding/methods , Imidazoles/administration & dosage , Naphthoquinones/administration & dosage , Neuroblastoma/drug therapy , Animals , Antibodies/immunology , Antineoplastic Agents/chemistry , Antineoplastic Agents/pharmacokinetics , Cell Line, Tumor , Drug Liberation , Drug Stability , Female , Gangliosides/immunology , Gangliosides/metabolism , Half-Life , Humans , Hydrophobic and Hydrophilic Interactions , Imidazoles/chemistry , Imidazoles/pharmacokinetics , Injections, Intravenous , Liposomes , Mice , Mice, Nude , Naphthoquinones/chemistry , Naphthoquinones/pharmacokinetics , Neuroblastoma/immunology , Neuroblastoma/pathology , Pilot Projects , Polyethylene Glycols/chemistry , Survivin/antagonists & inhibitors , Xenograft Model Antitumor Assays
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