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1.
Zootaxa ; 5325(4): 451-482, 2023 Aug 10.
Article in English | MEDLINE | ID: mdl-38220898

ABSTRACT

The morphology of the larva, pupa, male, and female of Rhyacophila loeffleri Valladolid & Waringer, n. sp., from Austria, Czech Republic, France, and Italy is described. Data from molecular analysis are also provided, based on mitochondrial cytochrome c oxidase subunit I (mtCOI), including sequences from German and Swiss specimens, and compared with those of samples of the nominate species R. fasciata Hagen 1859, as well as with other species and subspecies in the Rhyacophila fasciata Species Complex: R. septentrionis McLachlan 1865, R. denticulata McLachlan 1879, R. sociata Navs 1916, R. kykladica Malicky & Sipahiler 1993, R. delici Kuini & Valladolid 2020, R. fasciata viteceki Valladolid & Kuini 2020 and R. macedonica Karaouzas, Valladolid & Ibrahimi 2022. Our study revealed morphological differences between R. fasciata and R. loeffleri, as well as genetic differences among the other taxa of the R. fasciata Complex, supporting the recognition of R. loeffleri as a new species. Also, Rhyacophila fasciata viteceki is recognized as a distinct species, R. viteceki (status promotus), based on results of the molecular analysis.


Subject(s)
Holometabola , Insecta , Male , Female , Animals , Europe , Larva/genetics
2.
Zootaxa ; 5125(2): 101-130, 2022 Apr 08.
Article in English | MEDLINE | ID: mdl-36101224

ABSTRACT

The morphology of all postembryonic stages (larva, pupa, male, and female) of Rhyacophila macedonica Karaouzas, Valladolid, Ibrahimi n. sp. from Greece, Republic of North Macedonia, Kosovo and Serbia was examined. Morphological data were supplemented by a molecular analysis of the mitochondrial cytochrome C oxidase subunit I (COI) and compared with samples of the nominate species Rhyacophila fasciata Hagen 1859, as well as with other species and subspecies in this group: Rhyacophila septentrionis McLachlan 1865, Rhyacophila denticulata McLachlan 1879, Rhyacophila sociata Navs 1916, Rhyacophila kykladica Malicky Sipahiler 1993, Rhyacophila fasciata delici Kucinic Valladolid 2020, and Rhyacophila fasciata viteceki Valladolid Kucinic 2020. Our results revealed morphological differences between the nominate species and R. macedonica, as well as genetic differences among the taxa in the Rhyacophila fasciata Group, so we propose R. macedonica as a new species of the Group. Based on the new molecular data, we also elevate R. f. delici to the status of a distinct species, R. delici (status promotus).


Subject(s)
Gastropoda , Holometabola , Animals , Female , Greece , Insecta , Kosovo , Male , Republic of North Macedonia , Serbia
3.
Zootaxa ; 4975(1): 157, 2021 May 24.
Article in English | MEDLINE | ID: mdl-34186568

ABSTRACT

The presence and distribution of Rhyacophila fasciata Hagen 1859 in Europe were revised, based on bibliographic study, collection specimens, and new material collected in different countries. The status of formerly synonymized species, Rhyacophila ferruginea (Scopoli 1763) and Rhyacophila septentrionis McLachlan 1865 was also assessed. The type of R. ferruginea is missing, the taxon is still unidentified, and thus we propose Rhyacophila ferruginea as a nomen dubium. Morphological features and genetic evidence revealed that R. septentrionis differs from R. fasciata, so we propose to change its status to status resurrectus. We therefore include new descriptions of the different stages (larva, pupa, male, and female) of R. fasciata and of R. septentrionis, together with a molecular analysis based on mitochondrial cytochrome oxidase I (mtCOI) and ecological notes. The species R. coppai Oláh 2020 NEW SYNONYM and R. soreda Coppa Oláh 2020 NEW SYNONYM are synonyms of R. sociata Navás 1916; the species R. kopasa Oláh Coppa 2020 NEW SYNONYM and R. rova Oláh Coppa 2020 NEW SYNONYM are synonyms of R. denticulata McLachlan 1879; the species R. matrensis Oláh Szczesny 2020 is probably a synonym of R. fasciata, so more study of this species is needed in order to confirm or deny that it is a valid species.


Subject(s)
Holometabola/classification , Animals , Europe , Female , Larva , Male , Pupa
4.
Mitochondrial DNA B Resour ; 5(3): 3810-3811, 2020 Nov 20.
Article in English | MEDLINE | ID: mdl-33367109

ABSTRACT

The complete mitochondrial (mt) genomes of five subspecies of the Eurasian (Common) magpie Pica pica were determined for the first time. Lengths of the circular genomes comprise 13 protein-coding genes, two rRNA genes (for 12S rRNA and 16S rRNA), 22 tRNA genes, and the non-coding control region (CR). Gene content and lengths of the genomes (16,936-16,945 bp) are similar to typical vertebrate mt genomes. The subspecies studied differs by several single substitutions and indels, especially in the CR. The phylogenetic tree based on complete mt genomes shows a deep divergence of the two groups of subspecies which supports the proposed division into two distinct species: P. pica and P. serica.

5.
Zootaxa ; 4885(1): zootaxa.4885.1.3, 2020 Nov 24.
Article in English | MEDLINE | ID: mdl-33311286

ABSTRACT

We present the description of two new subspecies of the Rhyacophila fasciata Group: Rhyacophila fasciata delici Kucinic Valladolid (ssp. nov.), broadly distributed in Croatia and present also in Bosnia and Herzegovina, and R. fasciata viteceki Valladolid Kucinic (ssp. nov.), found in Bosnia and Herzegovina. Our study of the morphology of adults, as well as our analysis of the barcode region of the mitochondrial cytochrome oxidase I (mtCOI) gene and geographical distribution confirm the differences of the two new subspecies with the nominal species R. f. fasciata, also found in both countries.


Subject(s)
Holometabola , Insecta , Animals , Bosnia and Herzegovina , Croatia
6.
Zootaxa ; 4657(3): zootaxa.4657.3.5, 2019 Aug 20.
Article in English | MEDLINE | ID: mdl-31716772

ABSTRACT

The morphology of the different stages (larva, pupa, male, and female) of Rhyacophila fasciata kykladica Malicky Sipahiler 1993 was examined as a basis for the description of the taxon. Morphological data were supplemented by molecular analysis of mitochondrial cytochrome C oxidase subunit I (mtCOI), which were compared with samples of the nominate subspecies Rhyacophila fasciata fasciata Hagen 1859, as well as with other new species in this group, Rhyacophila denticulata McLachlan 1879 and Rhyacophila sociata Navás 1916. Our results revealed genetic differences between all the taxa; therefore, a change of taxonomic status of R. fasciata kykladica to R. kykladica (stat. prom.) is proposed.


Subject(s)
Holometabola , Insecta , Animals , Ecology , Female , Greece , Larva , Male
7.
Zootaxa ; 4418(6): 526-544, 2018 May 11.
Article in English | MEDLINE | ID: mdl-30313562

ABSTRACT

In order to check the presence and distribution of Rhyacophila fasciata fasciata Hagen 1859 (species described from Austria) and R. fasciata denticulata McLachlan 1879 in the Iberian Peninsula, we studied the morphology of Spanish, French, and Austrian specimens, together with their mitochondrial cytochrome c oxidase (mtCOI). We observed that the individuals considered to date as R. fasciata denticulata are in fact two different species: R. denticulata, presently known from France and possibly in some rivers of the Basque Country (Spain), and R. sociata Navás 1916 distributed in Spain and France. These two species are also different from the reference species (R. fasciata) from Austria, so we propose a change in the taxonomic status of R. fasciata denticulata to R. denticulata (stat. prom.) and the restoration of R. sociata (stat. res.), with the designation of a neotype, due to the loss of the holotype.


Subject(s)
Animal Distribution , Insecta , Animals , Austria , Europe , France , Spain
8.
Zookeys ; (678): 31-63, 2017.
Article in English | MEDLINE | ID: mdl-28769695

ABSTRACT

This is the first published database of a Bathynellacea Chappuis, 1915 collection of slices and DNA extracts. It includes all data of bathynellaceans (Crustacea: Syncarida) collected in the last 48 years (1968 to 2016) on the Iberian Peninsula and Balearic Islands, studied since 1984. It also includes specimens studied across many countries of Europe (Portugal, Romania, France, Italy, Slovenia, Bulgaria, and England), as well as some specimens obtained from samples of North America (Montana, Washington, Alaska and Texas), South America (Brazil, Chile and Argentina), Asia (China, Thailand, Vietnam, Mongolia and India), Africa (Morocco and Chad) and Australia (New South Wales -NSW- and Queensland). The samples come from groundwater (caves, springs, wells and hyporrheic habitat associated with rivers) obtained from both, sampling campaigns and occasional sampling efforts. The data set includes 3399 records (2657 slices and 742 DNA extracts) corresponding to three families (Parabathynellidae Noodt, 1965, Leptobathynellidae Noodt, 1965 and Bathynellidae Grobben, 1905) of the order Bathynellacea; the existence of three families is accepted, but this is a controversial issue and here is not the appropriate context to address this problem; 52 genera and 92 species formally described, in addition to 30 taxa under study and, thus, still unpublished. This represents more than half of all the genera known worldwide (80) and almost one third of the species currently known in the world (329, which increases every year). This dataset contains especially relevant collection that includes holotypes and type series of 43 new species of Bathynellacea (33 from the Parabathynellidae and ten from the Bathynellidae) described by Ana I. Camacho (AIC hereinafter); eleven of these are the type species for new genera described from all around the world, ten belonging to the Parabathynellidae and one from the Bathynellidae. As previously mentioned, these new species come from all continents, although 26 of them are from the Iberian Peninsula. The most important feature of this collection is that it has been created and reviewed by a specialist of the group (AIC), and each specimen, regardless of its shape (either permanent slices or DNA extracts), includes taxonomic, geographical and authorship information. The specialist has been involved in all stages of the process, from field sampling to the digitization of the results we are now presenting, and has worked in close collaboration with the curators responsible for the different collections involved in this project.

9.
Zookeys ; (386): 1-20, 2014.
Article in English | MEDLINE | ID: mdl-24693212

ABSTRACT

This is the first published database of Bathynellacea. It includes all data of bathynellids (Crustacea, Bathynellacea) collected in the last 64 years (1949 to 2013) on the Iberian Peninsula and Balearic Island. The samples come from groundwater (caves, springs, wells and hyporrheic habitat associated rivers) from both sampling campaigns and occasional sampling conducted throughout the Iberian Peninsula and Balearic Islands. The dataset lists occurrence data of bathynellids distribution, sampling sites (with localities, county and geographic coordinates), taxonomic information (from family to species level) and sampling sources (collector and sampling dates) for all records. The descriptions of new species and species identifications have been carried out by an expert taxonomist (AIC) with 25 years experience in the bathynellids studies (see references). Many of the sampling sites are type localities of endemic species from Iberian Peninsula. The dataset includes 409 samples record corresponding to two families, 12 genera and 58 species, 42 of them formally described plus 16 taxa unpublished and 47 samples in study. All species known from the study area are included, which nearly sum up a quarter of species of Bathynellacea known in the world (250 species).

10.
Exp Appl Acarol ; 34(1-2): 59-65, 2004.
Article in English | MEDLINE | ID: mdl-15597600

ABSTRACT

This work compares frozen water, 70% alcohol, Koenike's and Angelier's fluid as preservation media for water mites in terms of their eventual facilitation of DNA extraction and amplification. The time the mites spent in the fixatives ranged between 1 week and 25 years. Two molecular markers were amplified: 16S ribosomal DNA and CoI mitochondrial DNA. DNA was extractable and could be sequenced from specimens fixed in all the above media, although this generally became more difficult as time progressed. In the light of the known characteristics of these media, the results suggest Angelier's fluid to be the most practical, especially on long expeditions.


Subject(s)
DNA, Mitochondrial/analysis , Fixatives/standards , Mites/chemistry , Preservation, Biological/methods , RNA, Ribosomal, 16S/analysis , Animals , Base Sequence , DNA, Mitochondrial/chemistry , DNA, Mitochondrial/genetics , Electron Transport Complex IV/chemistry , Electron Transport Complex IV/genetics , Mites/genetics , Molecular Sequence Data , Preservation, Biological/standards , RNA, Ribosomal, 16S/chemistry , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Spain
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