ABSTRACT
This comprehensive review presents a comparative analysis of early embryogenesis in Protostomia and Deuterostomia, the first of which exhibit a mosaic pattern of development, where cells are fated deterministically, while Deuterostomia display a regulatory pattern of development, where the fate of cells is indeterminate. Despite these fundamental differences, there are common transcriptional mechanisms that underline their evolutionary linkages, particularly in the field of functional genomics. By elucidating both conserved and unique regulatory strategies, this review provides essential insights into the comparative embryology and developmental dynamics of these groups. The objective of this review is to clarify the shared and distinctive characteristics of transcriptional regulatory mechanisms. This will contribute to the extensive areas of functional genomics, evolutionary biology and developmental biology, and possibly lay the foundation for future research and discussion on this seminal topic.
Subject(s)
Bivalvia , Gene Expression Regulation, Developmental , Animals , Sea Urchins , Biological Evolution , GenomicsABSTRACT
The paper presents an original approach to the synthesis of polycalciumorganyl silsesquioxanes through the reaction of polyorganyl silsesquioxanes [RSiO1.5]n (where R is an ethyl and phenyl radical) with sea urchin skeleton under the conditions of mechanochemical activation. The novelty and practical significance of the present study lies in the use of an available natural raw source as a source of calcium ions to initiate the reaction of calcium silicate formation and create a matrix for the formation of a porous inorganic composite framework. The thermal stability of the introduced silicates, i.e., the ability to maintain a porous structure at high temperatures, is key to the production of an ordered porous material. The reaction scheme was proposed to be based on the interaction of calcium carbonate with the siloxane bond. FTIR, XRD, GPC, and TGA were used to study the composition and structure of the obtained materials. The cross-sectional area of the polymer chain and the volumes of the coherent scattering regions of the polymers obtained were calculated from the XRD data. To prepare the composites, the sea urchin skeleton was further modified with polycalciumorganyl silsesquioxanes in a toluene solution. To remove the sea urchin skeleton, the obtained biomimetic composites were treated with hydrochloric acid. The results of the morphological and surface composition studies are reported. The method proposed in the paper could be of fundamental importance for the possibility of obtaining structured porous composite materials for a wide range of practical applications, including for the purpose of creating a composite that may be a promising carrier for targeted delivery of chemotherapy agents.
ABSTRACT
The purple sea urchin Strongylocentrotus purpuratus has been used for over 150 years as a model organism in developmental biology. Using this model species, scientists have been able to describe, in detail, the mechanisms of cell cycle control and cell adhesion, fertilization, calcium signaling, cell differentiation, and death. Massive parallel sequencing of the sea urchin genome enabled the deciphering of the main components of gene regulatory networks during the activation of embryonic signaling pathways. This knowledge helped to extrapolate aberrations in somatic cells that may lead to diseases, including cancer in humans. Furthermore, since many, if not all, developmental signaling pathways were shown to be controlled by non-coding RNAs (ncRNAs), the sea urchin organism represents an attractive experimental model. In this review, we discuss the main discoveries in the genetics, genomics, and transcriptomics of sea urchins during embryogenesis with the main focus on the role of ncRNAs. This information may be useful for comparative studies between different organisms, and may help identify new regulatory networks controlled by ncRNAs.
