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1.
J Appl Microbiol ; 97(3): 557-65, 2004.
Article in English | MEDLINE | ID: mdl-15281936

ABSTRACT

AIMS: To investigate the fate of Aeromonas hydrophila pathogenicity when cells switch, in nutrient-poor filtered sterilized seawater, between the culturable and nonculturable state. METHODS AND RESULTS: Aeromonas hydrophila ATCC 7966, rendered non culturable within 50-55 days of exposure to marine stress conditions, was tested for its ability to maintain haemolysin and to adhere to McCoy cells. Results showed that pathogenicity was lost concomitantly with culturability, whereas cell viability remained undamaged, as determined by the Kogure cell elongation test. However, this loss is only temporary because, following temperature shift from 5 to 23 degrees C, multiple biological activities of recovered Aer. hydrophila cells, which include their ability to lyse human erythrocytes and to attach and destroy McCoy cells were regained. During the temperature-induced resuscitation, constant total cell counts were observed. Moreover, no significant improvement in recovery yield was obtained on brain-heart infusion (BHI) agar plates amended with catalase. We suggest that in addition to the growth of the few undetected culturable cells, there is repair and growth of some mildly injured viable but nonculturable cells. CONCLUSIONS: The possibility that nonculturable cells of normally culturable Aer. hydrophila in natural marine environment may constitute a source of infectious diseases posing a public health problem was demonstrated. SIGNIFICANCE AND IMPACT OF THE STUDY: These experiments may mimic what happens when Aer. hydrophila cells are released in natural seawater with careful attention to the conditions in which surrounding waters gradually become warmer in late summer/early autumn.


Subject(s)
Aeromonas hydrophila/pathogenicity , Cold Temperature , Seawater/microbiology , Aeromonas hydrophila/physiology , Bacterial Adhesion/physiology , Colony Count, Microbial , Culture Media , Erythrocytes/microbiology , Hemolysin Proteins/analysis , Hemolysis , Hot Temperature , Humans
2.
Int J Syst Evol Microbiol ; 53(Pt 1): 173-178, 2003 Jan.
Article in English | MEDLINE | ID: mdl-12656169

ABSTRACT

Mesophilic, hydrogenotrophic, sulfate-reducing bacteria were isolated from a deep-sea hydrothermal chimney sample collected at 13 degrees N on the East-Pacific Rise at a depth of 2,600 m. Two strains (BL5 and H9) were found to be phylogenetically similar to Desulfovibrio profundus (similarity >99%), whereas two other strains (H1 and AM13T) were found to be phylogenetically distinct (similarity 96.4%) from Desulfovibrio zosterae, their closest relative. Strain AM13T was characterized further. It was a barophilic, Gram-negative, non-sporulating, motile, vibrio-shaped or sigmoid bacterium possessing desulfoviridin. It grew at temperatures ranging from 20 to 40 degrees C, with an optimum at 35 degrees C in the presence of 2.5% NaCl. The pH range for growth was 6.7-8.2 with an optimum around 7.8. Strain AM13T utilized H2/CO2, lactate, formate, ethanol, choline and glycerol as electron donors. Electron acceptors were sulfate, sulfite and thiosulfate, but not elemental sulfur or nitrate. The G + C content of DNA was 47 mol%. Strain AM13T (= DSM 14728T = CIP107303T) differed from D. zosterae not only phylogenetically, but also genomically (DNA-DNA reassociation value between the two bacteria was 23.8%) and phenotypically. This isolate is therefore proposed as the type strain of a novel species of the genus Desulfovibrio, Desulfovibrio hydrothermalis sp. nov.


Subject(s)
Desulfovibrio/classification , Desulfovibrio/isolation & purification , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Desulfovibrio/genetics , Desulfovibrio/metabolism , Hot Temperature , Hydrostatic Pressure , Molecular Sequence Data , Phylogeny , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Seawater/microbiology
3.
Proc Natl Acad Sci U S A ; 97(11): 5746-9, 2000 May 23.
Article in English | MEDLINE | ID: mdl-10811907

ABSTRACT

In this study, we show a correlation between synthesis of aberrant proteins and their oxidative modification. The level of aberrant proteins was elevated in Escherichia coli cultures by decreasing transcriptional or translational fidelity using specific mutations or drugs. Protein carbonylation, an oxidative modification, increased in parallel to the induction of the heat shock chaperone GroEL. As the protein turnover rates and level of intracellular oxidative stress remained unchanged, it appears that carbonylation results from the increased susceptibility of the misfolded proteins. These studies show that the cellular protein oxidation is not limited only by available reactive oxygen species, but by the levels of aberrant proteins. Thus, protein oxidation seen in aging cells may be the consequence also of reduced transcriptional/translational fidelity, and protein structures appear to have evolved to minimize oxidative damage. In addition, we discuss the possibility that carbonylation, being an unrepairable protein modification, may serve as a tagging system to shunt misfolded proteins between pathways of refolding by chaperones or the proteolytic apparatus.


Subject(s)
Bacterial Proteins/metabolism , Mutation , Protein Biosynthesis , Transcription, Genetic , Acylation , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Escherichia coli/metabolism , Models, Biological , Oxidation-Reduction , Protein Folding , Reactive Oxygen Species , Superoxides/metabolism
4.
J Biol Chem ; 274(37): 26027-32, 1999 Sep 10.
Article in English | MEDLINE | ID: mdl-10473549

ABSTRACT

Analysis of protein carbonylation demonstrates that the stasis-induced catalases and cytoplasmic superoxide dismutases (SOD) have a role in preventing accelerated protein oxidation during growth arrest of Escherichia coli cells. A larger number of proteins are carbonylated in cells lacking cytoplasmic SOD compared with cells lacking catalases, OxyR, or RpoS which, in turn, exhibit a larger number of oxidized proteins than the wild-type parent. Proteins exclusively oxidized during stasis in mutants lacking cytoplasmic SOD include GroEL, EF-G, and the acidic isoform of H-NS indicating that these mutants experience problems in peptide elongation and maintaining protein and DNA architecture. These mutants also survive stasis poorly. Likewise, but to a much lesser extent, mutations in oxyR, an oxidative stress regulator, shorten the life-span of stationary phase cells. The low plating efficiency of cells lacking OxyR is the result of their inability to grow on standard culture plates unless plating is performed anaerobically or with high concentration of catalase. In contrast, cells lacking cytoplasmic SOD appear to die prior to plating. Our data points to the importance of oxidative stress defense in stasis survival, and we also demonstrate that the life-span of growth-arrested wild-type E. coli cells can be significantly extended by omitting oxygen.


Subject(s)
Escherichia coli/metabolism , Oxidative Stress , Catalase/metabolism , Cell Division , Escherichia coli/cytology , Escherichia coli/enzymology , Escherichia coli/genetics , Mutation , Oxygen/metabolism , Superoxide Dismutase/metabolism
5.
Arch Biochem Biophys ; 367(2): 311-6, 1999 Jul 15.
Article in English | MEDLINE | ID: mdl-10395749

ABSTRACT

Hypochlorous acid (HOCl) is probably the most widely used disinfectant worldwide and has an important role in inflammatory reaction and in human resistance to infection. However, the nature and mechanisms of its bactericidal activity are still poorly understood. Bacteria challenged aerobically with HOCl concentrations ranging from 9.5 to 76 microM exhibit higher ability to form colonies anaerobically than aerobically. Conversely, aerobic plating greatly increased lethality after an anaerobic HOCl challenge, although anaerobic survival did not depend on whether HOCl exposure was aerobic or anaerobic. Even a short transient exposure to air after anaerobic HOCl challenge reduced anaerobic survival, indicative of immediate deleterious effects of oxygen. Exposure to HOCl can cause lethal DNA damage as judged by the fact that recA sensitivity to HOCl was oxygen dependent. Antioxidant defenses such as reduced glutathione and glucose-6-phosphate dehydrogenase were depleted or inactivated at 10 microM HOCl, while other activities, such as superoxide dismutase, dropped only above 57 microM HOCl. Cumulative deficiencies in superoxide dismutase and glucose-6-phosphate dehydrogenase rendered strains hypersensitive to HOCl. This indicates that part of HOCl toxicity on Escherichia coli is mediated by reactive oxygen species during recovery.


Subject(s)
Escherichia coli/drug effects , Hypochlorous Acid/pharmacology , Reactive Oxygen Species , DNA Damage , DNA Repair , Dose-Response Relationship, Drug , Escherichia coli/genetics , Glucosephosphate Dehydrogenase/metabolism , Glutathione/metabolism , Humans , Mutation , Oxidative Stress , Oxygen/metabolism , Peroxidase/metabolism , Superoxide Dismutase/metabolism
6.
Genes Dev ; 12(21): 3431-41, 1998 Nov 01.
Article in English | MEDLINE | ID: mdl-9808629

ABSTRACT

Aging, or senescence, is the progressive deterioration of every bodily function over time. A fundamental question that applies to all life forms, including growth-arrested bacteria, is why growing older by necessity causes organisms to grow more fragile. In this work, we demonstrate that the levels of oxidized proteins is correlated to the age of a stationary-phase Escherichia coli culture; both disulfide bridge formation of a cytoplasmic leader-less alkaline phosphatase and protein carbonyl levels increase during stasis. The stasis-induced increase in protein oxidation is enhanced in cells lacking the global regulators OxyR and sigmas. Some proteins were found to be specifically susceptible to stasis-induced oxidation; notably several TCA cycle enzymes, glutamine synthetase, glutamate synthase, pyruvate kinase, DnaK, and H-NS. Evidence that oxidation of target proteins during stasis serves as the signal for stationary-phase, developmental, induction of the heat shock regulon is presented by demonstrating that this induction is mitigated by overproducing the superoxide dismutase SodA. In addition, cells lacking cytoplasmic superoxide dismutase activity exhibit superinduction of heat shock proteins. The possibility that oxidative sensitivity of TCA cycle enzymes serves as a feedback mechanism down-regulating toxic respiration is discussed.


Subject(s)
Bacterial Proteins/physiology , Cytoplasm/physiology , DNA-Binding Proteins , Escherichia coli Proteins , Escherichia coli/growth & development , Escherichia coli/physiology , Gene Expression Regulation/physiology , Heat-Shock Proteins/physiology , Regulon/physiology , Alkaline Phosphatase/metabolism , Bacterial Proteins/metabolism , Cytoplasm/metabolism , Disulfides , Gene Expression Regulation/genetics , HSP70 Heat-Shock Proteins/metabolism , Heat-Shock Proteins/genetics , Mutation/genetics , Oxidation-Reduction , Repressor Proteins/metabolism , Sigma Factor/metabolism , Superoxide Dismutase/physiology , Transcription Factors/metabolism
7.
Anal Chem ; 70(20): 4433-40, 1998 Oct 15.
Article in English | MEDLINE | ID: mdl-9796426

ABSTRACT

A protocol including 2D SDS-PAGE, electroblotting proteins onto nitrocellulose membranes, and CNBr cleavage, followed by MALDI-MS analysis of intact proteins and peptide fragments and a database search, has been optimized and applied to the rapid identification of the Escherichia coli response to hypochlorous acid. The methodology has proved to be efficient from the point of view of sensitivity (picomole range) and selectivity. In particular, MALDI analysis of proteins and CNBr fragments by directly dissolving the membrane in an acetone solution of matrix, without previous elution, is reliable and reproducible. The accuracy of the MW determination is somewhat reduced compared to that of methods involving elution and purification of proteins and digests; nevertheless, the utilization of large MW windows combined with the pI entry in database searches had allowed, for most of the spots, the selection of only one protein candidate. Finally, 19 proteins exhibiting a response to hypochlorous acid stress have been confirmed or identified on the basis of this protocol.


Subject(s)
Bacterial Proteins/analysis , Cyanogen Bromide , Escherichia coli/chemistry , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Electrophoresis, Polyacrylamide Gel/methods , Escherichia coli/drug effects , Hypochlorous Acid/pharmacology , Indicators and Reagents , Molecular Weight , Rosaniline Dyes
8.
Appl Environ Microbiol ; 63(11): 4204-9, 1997 Nov.
Article in English | MEDLINE | ID: mdl-9361405

ABSTRACT

An Escherichia coli population harvested in exponential phase at about 10(8) cells/ml was treated in phosphate buffer with HOCl at concentrations ranging from 0.4 to 1 mg/liter (7.7 to 19 microM). The HOCl stress resulted in the appearance of three cell subpopulations: a majority of dead (nonrespiring) cells, a few culturable cells (10(2) to 10(4)), and about 10(7) viable but nonculturable cells. In the absence of any added exogenous nutrient, a culturable population could be recovered after 1 day of incubation in phosphate buffer, and such a population would reach a cell density close to 10% of the initial density of the stressed population, whatever the initial number of survivors. When a small number of untreated cells were mixed with the stressed population, growth of the untreated cells was observed, demonstrating that damaged cells provided nutrients. Similarly, a filtrate and a disrupted-cell filtrate of the stressed population supported growth of untreated cells with the same efficiency. The number of CFU (untreated or stressed) at plateau phase depended on the initial density of the stressed cells. Taken together, these results suggest that recovery in phosphate buffer of an HOCl-stressed population is in large part due to growth of a few culturable cells at the expense of damaged cells. However, comparison of the growth rates of the stressed culturable population and of untreated bacteria growing in filtrate showed significantly faster growth of the stressed cells, a fact not fully compatible with the hypothesis that recovery is only the simple growth of survivors. We suggest, therefore, that in addition to growth of the few culturable stressed cells, there is repair and growth of some mildly injured viable but nonculturable cells.


Subject(s)
Escherichia coli/growth & development , Hypochlorous Acid/pharmacology , Buffers , Escherichia coli/drug effects , Phosphates/pharmacology
9.
Appl Environ Microbiol ; 62(11): 4003-8, 1996 Nov.
Article in English | MEDLINE | ID: mdl-8899987

ABSTRACT

A series of plasmids, containing fusions of different stress promoters to lux reporter genes, was used in an attempt to monitor the defense circuits activated upon exposure of Escherichia coli to sublethal doses of free chlorine. A significant level of activation was exhibited by promoters of three heat shock genes (grpE, dnaK, and lon), in an rpoH-dependent manner. The promoter of micF, a gene under the control of the soxRS regulon, was also strongly induced, but not in a soxR mutant. This induction was not affected by sodA and sodB mutations, implying that it did not involve oxygen radical activity. Free-chlorine activation of both heat shock and soxRS regulons required an exposure of less then I s in duration. The oxyR or the SOS regulons were apparently not induced by free chlorine (as judged by lack of activation of katG and recA, respectively), and neither was the universal stress (uspA) protein.


Subject(s)
Bacterial Proteins/genetics , Escherichia coli Proteins , Escherichia coli/drug effects , Escherichia coli/genetics , Heat-Shock Proteins/genetics , Hypochlorous Acid/pharmacology , Trans-Activators , Transcription Factors/genetics , Escherichia coli/metabolism , Gene Expression Regulation, Bacterial/drug effects , Genes, Bacterial/drug effects , Mutation , Promoter Regions, Genetic , Regulon , Sigma Factor/genetics , Superoxides/metabolism
10.
J Bacteriol ; 178(21): 6145-50, 1996 Nov.
Article in English | MEDLINE | ID: mdl-8892812

ABSTRACT

We have investigated the mechanisms of killing of Escherichia coli by HOCl by identifying protective functions. HOCl challenges were performed on cultures arrested in stationary phase and in exponential phase. Resistance to HOCl in both cases was largely mediated by genes involved in resistance to hydrogen peroxide (H2O2). In stationary phase, a mutation in rpoS, which controls the expression of starvation genes including those which protect against oxidative stress, renders the cells hypersensitive to killing by HOCl. RpoS-regulated genes responsible for this sensitivity were dps, which encodes a DNA-binding protein, and, to a lesser extent, katE and katG, encoding catalases; all three are involved in resistance to H2O2. In exponential phase, induction of the oxyR regulon, an adaptive response to H2O2, protected against HOCl exposure, and the oxyR2 constitutive mutant is more resistant than the wild-type strain. The genes involved in this oxyR-dependent resistance have not yet been identified, but they differ from those primarily involved in resistance to H2O2, including katG, ahp, and dps. Pretreatment with HOCl conferred resistance to H2O2 in an OxyR-independent manner, suggesting a specific adaptive response to HOCl. fur mutants, which have an intracellular iron overload, were more sensitive to HOCl, supporting the generation of hydroxyl radicals upon HOCl exposure via a Fenton-type reaction. Mutations in recombinational repair genes (recA or recB) increased sensitivity to HOCl, indicative of DNA strand breaks. Sensitivity was visible in the wild type only at concentrations above 0.6 mg/liter, but it was observed at much lower concentrations in dps recA mutants.


Subject(s)
DNA Damage , Escherichia coli/drug effects , Hydrogen Peroxide/pharmacology , Hypochlorous Acid/pharmacology , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Catalase/metabolism , DNA Repair , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Drug Resistance, Microbial/genetics , Escherichia coli/genetics , Escherichia coli/metabolism , Escherichia coli Proteins , Iron/metabolism , Recombination, Genetic , Regulon , Repressor Proteins/genetics , Repressor Proteins/metabolism , Sigma Factor/genetics , Sigma Factor/metabolism , Transcription Factors/genetics , Transcription Factors/metabolism
11.
Phys Rev Lett ; 74(12): 2311-2314, 1995 Mar 20.
Article in English | MEDLINE | ID: mdl-10057896
12.
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