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1.
Nat Commun ; 12(1): 5620, 2021 Sep 23.
Article in English | MEDLINE | ID: mdl-34556650

ABSTRACT

Due to their high coherence, lasers are ubiquitous tools in science. We show that by engineering the coupling between the gain medium and the laser cavity as well as the laser cavity and the output port, it is possible to eliminate most of the noise due to photons entering as well as leaving the laser cavity. Hence, it is possible to reduce the laser linewidth by a factor equal to the number of photons in the laser cavity below the standard quantum limit. We design and theoretically analyze a superconducting circuit that uses Josephson junctions, capacitors and inductors to implement a microwave laser, including the low-noise couplers that allow the design to surpass the standard quantum limit. Our proposal relies on the elements of superconducting quantum information, and thus is an example of how quantum engineering techniques can inspire us to re-imagine the limits of conventional quantum systems.

2.
Plant Cell Rep ; 37(8): 1113-1125, 2018 Aug.
Article in English | MEDLINE | ID: mdl-29796947

ABSTRACT

KEY MESSAGE: Regulatory sequences from the citrus constitutive genes cyclophilin (CsCYP), glyceraldehyde-3-phosphate dehydrogenase C2 (CsGAPC2), and elongation factor 1-alpha (CsEF1) were isolated, fused to the uidA gene, and qualitatively and quantitatively evaluated in transgenic sweet orange plants. The 5' upstream region of a gene (the promoter) is the most important component for the initiation and regulation of gene transcription of both native genes and transgenes in plants. The isolation and characterization of gene regulatory sequences are essential to the development of intragenic or cisgenic genetic manipulation strategies, which imply the use of genetic material from the same species or from closely related species. We describe herein the isolation and evaluation of the promoter sequence from three constitutively expressed citrus genes: cyclophilin (CsCYP), glyceraldehyde-3-phosphate dehydrogenase C2 (CsGAPC2), and elongation factor 1-alpha (CsEF1). The functionality of the promoters was confirmed by a histochemical GUS assay in leaves, stems, and roots of stably transformed citrus plants expressing the promoter-uidA construct. Lower uidA mRNA levels were detected when the transgene was under the control of citrus promoters as compared to the expression under the control of the CaMV35S promoter. The association of the uidA gene with the citrus-derived promoters resulted in mRNA levels of up to 60-41.8% of the value obtained with the construct containing CaMV35S driving the uidA gene. Moreover, a lower inter-individual variability in transgene expression was observed amongst the different transgenic lines, where gene constructs containing citrus-derived promoters were used. In silico analysis of the citrus-derived promoter sequences revealed that their activity may be controlled by several putative cis-regulatory elements. These citrus promoters will expand the availability of regulatory sequences for driving gene expression in citrus gene-modification programs.


Subject(s)
Citrus sinensis/metabolism , Plants, Genetically Modified/metabolism , Citrus sinensis/genetics , Cyclophilins/genetics , Cyclophilins/metabolism , Gene Expression Regulation, Plant/genetics , Gene Expression Regulation, Plant/physiology , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified/genetics , Promoter Regions, Genetic/genetics , Promoter Regions, Genetic/physiology , RNA, Messenger/genetics
3.
Opt Express ; 26(3): 2857-2872, 2018 Feb 05.
Article in English | MEDLINE | ID: mdl-29401820

ABSTRACT

We propose using a topological plasmonic crystal structure composed of an array of nearly parallel nanowires with unequal spacing for manipulating light. In the paraxial approximation, the Helmholtz equation that describes the propagation of light along the nanowires maps onto the Schrödinger equation of the Su-Schrieffer-Heeger (SSH) model. Using a full three-dimensional finite difference time domain solution of the Maxwell equations, we verify the existence of topological defect modes, with sub-wavelength localization, bound to domain walls of the plasmonic crystal. We show that by manipulating domain walls we can construct spatial mode filters that couple bulk modes to topological defect modes, and topological beam-splitters that couple two topological defect modes. Finally, we show that the structures are tolerant to fabrication errors with an inverse length-scale smaller than the topological band gap.

4.
Tree Physiol ; 32(1): 83-93, 2012 Jan.
Article in English | MEDLINE | ID: mdl-22228816

ABSTRACT

'Mexican' lime (Citrus aurantifolia Swingle) was transformed with constructs that contained chimeric promoter-gus gene fusions of phloem-specific rolC promoter of Agrobacterium rhizogenes, Arabidopsis thaliana sucrose-H(+) symporter (AtSUC2) gene promoter of Arabidopsis thaliana, rice tungro bacilliform virus (RTBV) promoter and sucrose synthase l (RSs1) gene promoter of Oryza sativa (rice). Histochemical ß-glucuronidase (GUS) analysis revealed vascular-specific expression of the GUS protein in citrus. The RTBV promoter was the most efficient promoter in this study while the RSs1 promoter could drive low levels of gus gene expression in citrus. These results were further validated by reverse transcription real-time polymerase chain reaction and northern blotting. Southern blot analysis confirmed stable transgene integration, which ranged from a single insertion to four copies per genome. The use of phloem-specific promoters in citrus will allow targeted transgene expression of antibacterial constructs designed to battle huanglongbing disease (HLB or citrus greening disease), associated with a phloem-limited Gram-negative bacterium.


Subject(s)
Citrus/genetics , Phloem/genetics , Promoter Regions, Genetic , Biological Assay , Blotting, Northern , Blotting, Southern , Citrus/physiology , Cloning, Molecular , DNA, Bacterial/genetics , Fluorometry , Gene Expression Regulation, Plant , Genetic Vectors/genetics , Glucuronidase/metabolism , Mexico , Organ Specificity/genetics , Phloem/enzymology , Plant Leaves/enzymology , Plant Roots/enzymology , Plant Stems/enzymology , Plants, Genetically Modified , Regeneration/genetics , Reverse Transcriptase Polymerase Chain Reaction , Transformation, Genetic
5.
Nat Nanotechnol ; 7(2): 109-13, 2011 Dec 18.
Article in English | MEDLINE | ID: mdl-22179565

ABSTRACT

Magnetic sensors capable of detecting nanoscale volumes of spins allow for non-invasive, element-specific probing. The error in such measurements is usually reduced by increasing the measurement time, and noise averaging the signal. However, achieving the best precision requires restricting the maximum possible field strength to much less than the spectral linewidth of the sensor. Quantum entanglement and squeezing can then be used to improve precision (although they are difficult to implement in solid-state environments). When the field strength is comparable to or greater than the spectral linewidth, an undesirable trade-off between field strength and signal precision occurs. Here, we implement novel phase estimation algorithms on a single electronic spin associated with the nitrogen-vacancy defect centre in diamond to achieve an ∼8.5-fold improvement in the ratio of the maximum field strength to precision, for field magnitudes that are large (∼0.3 mT) compared to the spectral linewidth of the sensor (∼4.5 µT). The field uncertainty in our approach scales as 1/T(0.88), compared to 1/T(0.5) in the standard measurement approach, where T is the measurement time. Quantum phase estimation algorithms have also recently been implemented using a single nuclear spin in a nitrogen-vacancy centre. Besides their direct impact on applications in magnetic sensing and imaging at the nanoscale, these results may prove useful in improving a variety of high-precision spectroscopy techniques.


Subject(s)
Diamond/chemistry , Magnetometry/methods , Nanostructures/chemistry , Algorithms , Carbon/chemistry , Electromagnetic Fields , Electron Spin Resonance Spectroscopy , Magnetometry/instrumentation , Nitrogen/chemistry , Quantum Dots
6.
Nature ; 466(7307): 730-4, 2010 Aug 05.
Article in English | MEDLINE | ID: mdl-20686569

ABSTRACT

Quantum entanglement is among the most fascinating aspects of quantum theory. Entangled optical photons are now widely used for fundamental tests of quantum mechanics and applications such as quantum cryptography. Several recent experiments demonstrated entanglement of optical photons with trapped ions, atoms and atomic ensembles, which are then used to connect remote long-term memory nodes in distributed quantum networks. Here we realize quantum entanglement between the polarization of a single optical photon and a solid-state qubit associated with the single electronic spin of a nitrogen vacancy centre in diamond. Our experimental entanglement verification uses the quantum eraser technique, and demonstrates that a high degree of control over interactions between a solid-state qubit and the quantum light field can be achieved. The reported entanglement source can be used in studies of fundamental quantum phenomena and provides a key building block for the solid-state realization of quantum optical networks.

7.
Plant Cell Rep ; 29(11): 1251-60, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20711728

ABSTRACT

A method for the genetic transformation of several citrus cultivars is described, including cultivars observed to be recalcitrant to conventional epicotyl-mediated transformation. Embryogenic cell suspension cultures, established from unfertilized ovules were used as target tissues for Agrobacterium-mediated transformation. Several modifications were made to the culture environment to investigate factors required for efficient transfer of the T-DNA and the subsequent regeneration of transgenic citrus plants. It was determined that co-cultivation of citrus cells and Agrobacterium in EME medium supplemented with maltose (EME-M) and 100 µM acetosyringone for 5 days at 25°C was optimum for transformation of each of the citrus cultivars. Efficient selection was obtained and escapes were prevented when the antibiotic hygromycin B was used as a selection antibiotic following transformation with an Agrobacterium strain containing hptII in the T-DNA region. Transgenic embryo regeneration and development was enhanced in medium that contained a liquid overlay consisting of a 1:2 mixture of 0.6 M BH3 and 0.15 M EME-M media. PCR and Southern blot analyses confirmed the presence of the T-DNA and the stable integration into the genome of regenerated plants, while RT-PCR demonstrated variable amounts of RNA being transcribed in different transgenic lines. This protocol can create an avenue for insertion of useful traits into any polyembryonic citrus cultivar that can be established as embryogenic cell suspension cultures, including popular specialty mandarins and seedless cultivars.


Subject(s)
Citrus/growth & development , Plant Somatic Embryogenesis Techniques/methods , Rhizobium/genetics , Transformation, Genetic , Citrus/genetics , Culture Media , DNA, Bacterial/genetics , Genetic Vectors , Hygromycin B/pharmacology , Plants, Genetically Modified/genetics , Plants, Genetically Modified/growth & development , Regeneration
8.
J Environ Biol ; 29(1): 43-5, 2008 Jan.
Article in English | MEDLINE | ID: mdl-18831329

ABSTRACT

Larvicidal effect of neem (Azadirachta indica) and karanja (Pongamia glabra) oil cakes (individuals and combination) was studied against mosquito species. Both the oil cakes showed larvicidal activity against the mosquito species tested. The combination of neem and karanja oil cakes in equal proportion proved to have better effect than the individual treatments. The combination of the two oil cakes recorded an LC95 of 0.93, 0.54 and 0.77% against the mosquitoes, Culex quinquefasciatus, Aedes aegypti and Anopheles stephensi respectively The increase in efficacy of the combination treatment over individuals in all the mosquito larvae tested was found to range about 4 to 10 fold in terms of LC50 and 2 to 6 fold in terms of LC95.


Subject(s)
Azadirachta/chemistry , Culicidae/drug effects , Culicidae/growth & development , Insecticides/pharmacology , Mosquito Control/methods , Oils, Volatile/pharmacology , Pongamia/chemistry , Aedes , Animals , Anopheles , Culex , Larva/drug effects , Larva/growth & development , Species Specificity , Time Factors
9.
Nature ; 455(7213): 644-7, 2008 Oct 02.
Article in English | MEDLINE | ID: mdl-18833275

ABSTRACT

Detection of weak magnetic fields with nanoscale spatial resolution is an outstanding problem in the biological and physical sciences. For example, at a distance of 10 nm, the spin of a single electron produces a magnetic field of about 1 muT, and the corresponding field from a single proton is a few nanoteslas. A sensor able to detect such magnetic fields with nanometre spatial resolution would enable powerful applications, ranging from the detection of magnetic resonance signals from individual electron or nuclear spins in complex biological molecules to readout of classical or quantum bits of information encoded in an electron or nuclear spin memory. Here we experimentally demonstrate an approach to such nanoscale magnetic sensing, using coherent manipulation of an individual electronic spin qubit associated with a nitrogen-vacancy impurity in diamond at room temperature. Using an ultra-pure diamond sample, we achieve detection of 3 nT magnetic fields at kilohertz frequencies after 100 s of averaging. In addition, we demonstrate a sensitivity of 0.5 muT Hz(-1/2) for a diamond nanocrystal with a diameter of 30 nm.

10.
Phys Rev Lett ; 100(7): 073001, 2008 Feb 22.
Article in English | MEDLINE | ID: mdl-18352544

ABSTRACT

We investigate the coherence properties of individual nuclear spin quantum bits in diamond [Dutt, Science 316, 1312 (2007)10.1126/science.1139831] when a proximal electronic spin associated with a nitrogen-vacancy (N-V) center is being interrogated by optical radiation. The resulting nuclear spin dynamics are governed by time-dependent hyperfine interaction associated with rapid electronic transitions, which can be described by a spin-fluctuator model. We show that due to a process analogous to motional averaging in nuclear magnetic resonance, the nuclear spin coherence can be preserved after a large number of optical excitation cycles. Our theoretical analysis is in good agreement with experimental results. It indicates a novel approach that could potentially isolate the nuclear spin system completely from the electronic environment.

11.
Plant Cell Rep ; 27(5): 865-72, 2008 May.
Article in English | MEDLINE | ID: mdl-18256837

ABSTRACT

A method to produce transgenic plants of Vitis rotundifolia was developed. Embryogenic cultures were initiated from leaves of in vitro grown shoot cultures and used as target tissues for Agrobacterium-mediated genetic transformation. A green fluorescent protein/neomycin phosphotransferase II (gfp/nptII) fusion gene that allowed for simultaneous selection of transgenic cells based on GFP fluorescence and kanamycin resistance was used to optimize parameters influencing genetic transformation. It was determined that both proembryonal masses (PEM) and mid-cotyledonary stage somatic embryos (SE) were suitable target tissues for co-cultivation with Agrobacterium as evidenced by transient GFP expression. Kanamycin at 100 mg l(-1) in the culture medium was effective in suppression of non-transformed tissue and permitting the growth and development of transgenic cells, compared to 50 or 75 mg l(-1), which permitted the proliferation of more non-transformed cells. Transgenic plants of "Alachua" and "Carlos" were recovered after secondary somatic embryogenesis from primary SE explants co-cultivated with Agrobacterium. The presence and stable integration of transgenes in transgenic plants was confirmed by PCR and Southern blot hybridization. Transgenic plants exhibited uniform GFP expression in cells of all plant tissues and organs including leaves, stems, roots, inflorescences and the embryo and endosperm of developing berries.


Subject(s)
Plants, Genetically Modified/genetics , Regeneration/genetics , Rhizobium/genetics , Vitis/genetics , Blotting, Southern , Cells, Cultured , Kanamycin/pharmacology , Kanamycin Kinase/genetics , Kanamycin Kinase/metabolism , Plants, Genetically Modified/drug effects , Plants, Genetically Modified/physiology , Polymerase Chain Reaction , Regeneration/drug effects , Regeneration/physiology , Transformation, Genetic , Vitis/cytology , Vitis/embryology
12.
Plant Cell Rep ; 26(12): 2101-10, 2007 Dec.
Article in English | MEDLINE | ID: mdl-17701039

ABSTRACT

Shoot apical meristem explants of Vitis vinifera "Thompson Seedless" were used for Agrobacterium-mediated genetic transformation. It was determined that the meristems had to be subjected to a dark growth phase then wounded to obtain transgenic plants. Morphological and histological studies illustrated the role of wounding to expose apical meristem cells for transformation. A bifunctional egfp/nptII fusion gene was used to select kanamycin resistant plants that expressed green fluorescent protein (GFP). Kanamycin at a concentration of 16 mg L(-1) in selection medium resulted in recovery of non-chimeric transgenic plants that uniformly expressed GFP, whereas 8 mg L(-1) kanamycin allowed non-transgenic and/or chimeric plants to develop. Polymerase chain reaction (PCR) and Southern blot analyses confirmed the presence of transgenes and their stable integration into the genome of regenerated plants. Up to 1% of shoot tips produced stable transgenic cultures within 6 weeks of treatment, resulting in a total of 18 independent lines.


Subject(s)
Meristem/genetics , Plant Shoots/genetics , Plants, Genetically Modified/genetics , Vitis/genetics , Blotting, Southern , Drug Resistance/genetics , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Kanamycin/pharmacology , Meristem/drug effects , Meristem/ultrastructure , Microscopy, Electron, Scanning , Plant Shoots/drug effects , Plant Shoots/ultrastructure , Plants, Genetically Modified/drug effects , Plants, Genetically Modified/ultrastructure , Polymerase Chain Reaction , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Rhizobium/genetics , Tissue Culture Techniques , Transformation, Genetic , Transgenes/genetics , Vitis/drug effects , Vitis/ultrastructure
13.
Science ; 316(5829): 1312-6, 2007 Jun 01.
Article in English | MEDLINE | ID: mdl-17540898

ABSTRACT

The key challenge in experimental quantum information science is to identify isolated quantum mechanical systems with long coherence times that can be manipulated and coupled together in a scalable fashion. We describe the coherent manipulation of an individual electron spin and nearby individual nuclear spins to create a controllable quantum register. Using optical and microwave radiation to control an electron spin associated with the nitrogen vacancy (NV) color center in diamond, we demonstrated robust initialization of electron and nuclear spin quantum bits (qubits) and transfer of arbitrary quantum states between them at room temperature. Moreover, nuclear spin qubits could be well isolated from the electron spin, even during optical polarization and measurement of the electronic state. Finally, coherent interactions between individual nuclear spin qubits were observed and their excellent coherence properties were demonstrated. These registers can be used as a basis for scalable, optically coupled quantum information systems.

14.
Indian J Public Health ; 50(1): 19-23, 2006.
Article in English | MEDLINE | ID: mdl-17193754

ABSTRACT

A cross-sectional health examination survey was carried out among a random sample of 406 people of 30 years and above from a rural community to investigate the prevalence of coronary heart disease risk factors. Prevalence of smoking and tobacco use was 16%, alcohol intake 9.4 %, daily Salt intake (> or = 5 gram) 34.2%, daily saturated fat intake ( > or =10 % of daily energy intake) 47.0 % and physical inactivity 18.5 %. BMI was > or =25 Kg /m(2) in 18 percent and it was > or =30 Kg / m(2) in 3.2 percent population. Truncal obesity (WHR: men> 0.9; women > 0.8) was found 18.5 percent more in case of males (20.7). Abdominal obesity(men > or =102; women > or = 88)was found 15.7 percent more in case of males (20.6).18.5 percent population was found suffering from systolic hypertension> or =140 mm Hg )and 15 percent from diastolic hypertension(> or =90 mm Hg). Awareness of CHD risk factors was present in 30.0 percent population. Differences in prevalence of riskfactor in male and female were found statistically significant in case of smoking, alcohol consumption and abdominal obesity. The present study shows that prevalence of CHD risk factors increases significantly in men and women having BMI equal or more than 25 Kg /m(2) so this cutoff, should be used to determine obesity in Indian population.


Subject(s)
Coronary Disease/etiology , Obesity/complications , Risk Factors , Rural Health , Smoking/adverse effects , Sodium, Dietary/adverse effects , Adult , Cross-Sectional Studies , Female , Humans , India/epidemiology , Male , Middle Aged , Obesity/epidemiology , Prevalence , Smoking/epidemiology , Sodium, Dietary/administration & dosage
15.
Science ; 314(5797): 281-5, 2006 Oct 13.
Article in English | MEDLINE | ID: mdl-16973839

ABSTRACT

Understanding and controlling the complex environment of solid-state quantum bits is a central challenge in spintronics and quantum information science. Coherent manipulation of an individual electron spin associated with a nitrogen-vacancy center in diamond was used to gain insight into its local environment. We show that this environment is effectively separated into a set of individual proximal 13C nuclear spins, which are coupled coherently to the electron spin, and the remainder of the 13C nuclear spins, which cause the loss of coherence. The proximal nuclear spins can be addressed and coupled individually because of quantum back-action from the electron, which modifies their energy levels and magnetic moments, effectively distinguishing them from the rest of the nuclei. These results open the door to coherent manipulation of individual isolated nuclear spins in a solid-state environment even at room temperature.

16.
Phys Rev Lett ; 94(22): 227403, 2005 Jun 10.
Article in English | MEDLINE | ID: mdl-16090438

ABSTRACT

We report on the coherent optical excitation of electron spin polarization in the ground state of charged GaAs quantum dots via an intermediate charged exciton (trion) state. Coherent optical fields are used for the creation and detection of the Raman spin coherence between the spin ground states of the charged quantum dot. The measured spin decoherence time, which is likely limited by the nature of the spin ensemble, approaches 10 ns at zero field. We also show that the Raman spin coherence in the quantum beats is caused not only by the usual stimulated Raman interaction but also by simultaneous spontaneous radiative decay of either excited trion state to a coherent combination of the two spin states.

17.
J Clin Pathol ; 56(8): 596-8, 2003 Aug.
Article in English | MEDLINE | ID: mdl-12890809

ABSTRACT

AIMS: To investigate the concentrations of bilirubin, bilirubin conjugates, phospholipid, and cholesterol in the gall bladder bile obtained at surgery from patients with and without cholesterol gallstones. METHODS: Gall bladder bile was collected during surgery, by puncture, from 20 patients with gallstones undergoing routine cholecystectomy and from eight patients with normal liver blood tests. Concentrations of bilirubin, bilirubin conjugates, phospholipid, and cholesterol were measured using standard procedures. RESULTS: The proportion of total bilirubin that was unconjugated was significantly higher in the bile from patients with stones than in bile from control patients, whether or not the bile from either group was saturated with cholesterol or not. Indeed, the mean concentration of cholesterol was significantly higher in control bile samples. CONCLUSION: The presence of stones was more closely related to the proportion of unconjugated bilirubin than to the degree of saturation of bile with cholesterol. Bilirubin and its metabolites probably play an important part in the formation of cholesterol gallstones.


Subject(s)
Bile/chemistry , Bilirubin/analysis , Cholelithiasis/metabolism , Adult , Aged , Bile/metabolism , Bile Acids and Salts/analysis , Bilirubin/metabolism , Case-Control Studies , Cholecystectomy , Cholelithiasis/surgery , Cholesterol/analysis , Female , Humans , Male , Middle Aged , Phospholipids/analysis
18.
Phys Rev Lett ; 88(22): 223601, 2002 Jun 03.
Article in English | MEDLINE | ID: mdl-12059418

ABSTRACT

The homodyne-detected transient four-wave-mixing response of InAs/GaAs self-assembled quantum dots shows temporal oscillations of the optically induced Raman coherence arising from two entangled polarization eigenstates of the exciton. The phase sensitive nature of the homodyne detection enables us to follow the time evolution of the nonradiative quantum coherence between the polarization states, providing a measurement of the fine-structure splitting in the dots, which is much less than the inhomogeneous broadening, and the corresponding decoherence rate of the entangled state.

19.
Int J Antimicrob Agents ; 18(3): 245-52, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11673037

ABSTRACT

Liposomes and PLG microparticles were investigated as sustained release antitubercular drug carriers for isoniazid (INH) and rifampicin (RIF). In vitro release of drugs from liposomes showed a sustained release of INH and RIF up to 4 weeks. PLG microparticles exhibited a sustained release of INH and RIF up to 6 and 49 days, respectively. In vivo drug disposition studies from liposomes indicated a sustained release of INH in plasma and various tissues up to 24 h and 5 days, respectively, while release of rifampicin was obtained for 24 and 72 h in plasma and various tissues. In vivo drug disposition studies from PEG-PLG microparticles indicated a sustained release of INH up to 9 and 27 days in plasma and various tissues, while rifampicin was detected in plasma and lungs up to 12 h and 27 days. Hepatotoxicity studies revealed no toxicity induced using biochemical tests. PLG microparticles exhibited a more sustained release of antitubercular drugs than a liposomal carrier system.


Subject(s)
Antibiotics, Antitubercular/pharmacokinetics , Antitubercular Agents/pharmacokinetics , Alkaline Phosphatase/blood , Animals , Antibiotics, Antitubercular/blood , Antitubercular Agents/blood , Antitubercular Agents/toxicity , Aspartate Aminotransferases/blood , Bilirubin/blood , Delayed-Action Preparations , Drug Carriers , Female , Isoniazid/metabolism , Lactic Acid , Liposomes , Liver/drug effects , Liver/enzymology , Male , Mice , Particle Size , Polyethylene Glycols , Polyglycolic Acid , Polylactic Acid-Polyglycolic Acid Copolymer , Polymers , Rifampin/metabolism , Tissue Distribution
20.
Electrophoresis ; 22(9): 1627-32, 2001 May.
Article in English | MEDLINE | ID: mdl-11425218

ABSTRACT

A new variable for measuring the relative intensities of silver stained protein spots on two-dimensional gels is described. The scaled volume (SV) more accurately measures the intensity of protein spots and accounts for differences frequently encountered when trying to compare two gels than other variables such as relative volume ratio, optical density, or relative optical density. The SV scales the signal of interest by the noise (gel background) with secondary signals removed (spots not of interest, e.g., technical artifacts). The SV of spot intensities offers a better dynamic response to protein amount for the model proteins studied here. Depending on the quantity of protein loaded onto gels, we have observed a coefficient of variation range of 0.2 to 1.3. We also observe that the SV silver stain response follows a characteristic exponential profile for different proteins.


Subject(s)
Proteins/analysis , Animals , Electrophoresis, Gel, Two-Dimensional/methods , Humans , Image Processing, Computer-Assisted , Silver Staining
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