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1.
Blood ; 138(15): 1345-1358, 2021 10 14.
Article in English | MEDLINE | ID: mdl-34010414

ABSTRACT

The blood system serves as a key model for cell differentiation and cancer. It is orchestrated by precise spatiotemporal expression of crucial transcription factors. One of the key master regulators in the hematopoietic systems is PU.1. Reduced levels of PU.1 are characteristic for human acute myeloid leukemia (AML) and are known to induce AML in mouse models. Here, we show that transcriptional downregulation of PU.1 is an active process involving an alternative promoter in intron 3 that is induced by RUNX transcription factors driving noncoding antisense transcription. Core-binding factor (CBF) fusions RUNX1-ETO and CBFß-MYH11 in t(8;21) and inv(16) AML, respectively, activate the PU.1 antisense promoter that results in a shift from sense toward antisense transcription and myeloid differentiation blockade. In patients with CBF-AML, we found that an elevated antisense/sense transcript and promoter accessibility ratio represents a hallmark compared with normal karyotype AML or healthy CD34+ cells. Competitive interaction of an enhancer with the proximal or the antisense promoter forms a binary on/off switch for either myeloid or T-cell development. Leukemic CBF fusions thus use a physiological mechanism used by T cells to decrease sense transcription. Our study is the first example of a sense/antisense promoter competition as a crucial functional switch for gene expression perturbation by oncogenes. Hence, this disease mechanism reveals a previously unknown Achilles heel for future precise therapeutic targeting of oncogene-induced chromatin remodeling.


Subject(s)
Core Binding Factor Alpha 2 Subunit/genetics , Core Binding Factor beta Subunit/genetics , Gene Expression Regulation, Leukemic , Leukemia, Myeloid, Acute/genetics , Proto-Oncogene Proteins/genetics , Trans-Activators/genetics , Antisense Elements (Genetics)/genetics , Cell Line, Tumor , Gene Fusion , Humans , Oncogene Proteins, Fusion/genetics , Promoter Regions, Genetic , RUNX1 Translocation Partner 1 Protein/genetics , Tumor Cells, Cultured
2.
J Neurosci ; 16(16): 5014-25, 1996 Aug 15.
Article in English | MEDLINE | ID: mdl-8756432

ABSTRACT

A novel strain of mutant mouse has been generated with a deletion of the gene encoding the NR2C subunit of the NMDA receptor, which is primarily expressed in cerebellar granule cells. Patch-clamp recordings from granule cells in thin cerebellar slices were used to assess the consequences of the gene deletion. In granule cells of wild-type animals, a wide range of single-channel conductances were observed (19-60 pS). The disruption of the NR2C gene results in the disappearance of low-conductance NMDA receptor channels ( < 37 pS) normally expressed in granule cells during developmental maturation. The NMDA receptor-mediated synaptic current is markedly potentiated in amplitude, but abbreviated in duration (with no net difference in total charge), and the non-NMDA component of the synaptic current was reduced. We conclude that the NR2C subunit contributes to functional heteromeric NMDA receptor-subunit assemblies at the mossy fiber synapse and extrasynaptic sites during maturation, and the conductance level exhibited by a given receptor macromolecule may reflect the stochiometry of subunit composition.


Subject(s)
Gene Targeting , Genes , Ion Channels/physiology , Receptors, N-Methyl-D-Aspartate/genetics , Receptors, N-Methyl-D-Aspartate/metabolism , Synaptic Transmission , Animals , Cerebellum/cytology , Cerebellum/metabolism , Electric Conductivity , Ion Channel Gating , Mice , Mice, Inbred C57BL , Mice, Knockout , Nerve Fibers/physiology , Rats , Rats, Sprague-Dawley , Synapses/physiology
3.
Neuron ; 15(4): 867-73, 1995 Oct.
Article in English | MEDLINE | ID: mdl-7576635

ABSTRACT

We have generated mice deficient in HO-2, the major cerebral isoform of heme oxygenase, in order to assess the potential role of carbon monoxide as a retrograde messenger in hippocampal LTP. Cerebral HO catalytic activity was markedly reduced in the HO-2 mutant mice, yet no differences were found between wild types and mutants in gross neuroanatomical structure, in basal hippocampal synaptic transmission, or in the amount of potentiation produced by various LTP induction protocols. Furthermore, zinc protoporphyrin IX, an inhibitor of HO, had nearly identical inhibitory effects on LTP in wild-type and HO-2 mutant hippocampal slices. Our data indicate that carbon monoxide produced endogenously by HO is unlikely to be a neuromodulator required for LTP in the hippocampus.


Subject(s)
Heme Oxygenase (Decyclizing)/genetics , Heme Oxygenase (Decyclizing)/physiology , Hippocampus/physiology , Long-Term Potentiation/physiology , Mutagenesis , Animals , Behavior, Animal , Carbon Monoxide/metabolism , Enzyme Inhibitors/pharmacology , Female , Gene Targeting , Heme Oxygenase (Decyclizing)/deficiency , Homozygote , Male , Mice , Mice, Inbred C57BL , Mice, Mutant Strains , Protoporphyrins/pharmacology , Rats , Synaptic Transmission/physiology
4.
Gene ; 135(1-2): 229-38, 1993 Dec 15.
Article in English | MEDLINE | ID: mdl-8276262

ABSTRACT

The main stream of biology today is the analysis of the molecular mechanisms of major biological phenomena through studies of the genes governing these processes and their protein products. An example is the problem of tumor metastasis which is extremely important both theoretically and practically. Here we describe the data obtained on the detection, cloning, structure and transcription control of the mts1 gene, that encodes metastasin 1, a protein which seems to play an important role in the control of metastasis in mouse tumors. In particular, the experiments on tumor cell transfection with constructions containing either a sense or antisense mts1 sequence under a strong promoter/enhancer element show the direct dependence of the metastatic phenotype on the expression of the mts1 gene at least in some systems. Gene mts1 encodes a protein belonging to the family of Ca(2+)-binding proteins and may be involved in the control of cell motility in different types of cells, such as macrophages and T-lymphocytes. The relationship between mts1 and other genes up- and down-regulated in metastatic cells is discussed.


Subject(s)
Calcium-Binding Proteins/genetics , Gene Expression Regulation, Neoplastic , Neoplasm Metastasis/genetics , Neoplasm Proteins/genetics , S100 Proteins , Amino Acid Sequence , Animals , Base Sequence , DNA, Neoplasm , Humans , Molecular Sequence Data , S100 Calcium-Binding Protein A4
6.
Gene ; 87(2): 219-23, 1990 Mar 15.
Article in English | MEDLINE | ID: mdl-2332170

ABSTRACT

Different oncogenes are implicated in the genesis of tumors. However, little is known so far about the genes which are activated at the latest stages of tumor progression. While studying two genetically related mouse lines, highly metastatic CSML-100 and nearly nonmetastatic CSML-0, we have cloned the cDNA of the gene, mts1, which is specifically expressed in different metastatic cells. The gene contains an open reading frame of 101 amino acids and shows homology with a family of Ca2(+)-binding proteins. Here, we present data on the structure of a 17-kb genomic clone of mts1 with surrounding sequences. The gene contains two introns and three exons. The mts1 upstream region has been cloned in a plasmid containing the cat gene. The results of transient expression of the mts1-cat plasmid in NIH3T3 cells indicate the presence of a transcription regulator of mts1.


Subject(s)
Gene Expression Regulation, Neoplastic , Neoplasm Metastasis/genetics , Transcription, Genetic , Amino Acid Sequence , Animals , Base Sequence , Blotting, Northern , Cloning, Molecular , DNA/genetics , Genes , Mice , Molecular Sequence Data , Promoter Regions, Genetic , Restriction Mapping , Tumor Cells, Cultured
7.
Genetika ; 25(7): 1150-9, 1989 Jul.
Article in Russian | MEDLINE | ID: mdl-2806900

ABSTRACT

A genomic copy of the mts271 gene which is specifically expressed in metastatic cells has been cloned and characterized. The gene consists of two exons and one intron and has an open-reading frame for the protein of 101 amino acids. The protein contains two helix-loop-helix calcium-binding domains, which is a common feature for the members of the large family of intracellular calcium-binding proteins (Ca B Ps). The primary structures of the mts271 gene products and other Ca B Ps were compared. High level of homology was found for S100 and calcium-binding protein of intestinal epithelium of rats. On the whole, the mts271 protein is a new calcium-binding protein which is specifically expressed in metastatic cells.


Subject(s)
Calcium-Binding Proteins/genetics , Neoplasm Metastasis/genetics , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , Electrophoresis, Polyacrylamide Gel , Exons , Introns , Mammary Neoplasms, Experimental/genetics , Mammary Neoplasms, Experimental/pathology , Mice , Molecular Sequence Data , Nucleic Acid Conformation , Nucleic Acid Hybridization , Phenotype , Plasmids , Rats , S100 Proteins/genetics , Sequence Homology, Nucleic Acid , Transcription, Genetic , Tumor Cells, Cultured
8.
Genetika ; 25(6): 993-1000, 1989 Jun.
Article in Russian | MEDLINE | ID: mdl-2478418

ABSTRACT

Transcription of the mts271 gene was studied in 27 mouse cell tumor lines. Transcripts of the gene have been found in 6 out of 7 different metastatic lines. No transcription of the gene has been observed in non-metastatic tumor lines. In normal tissues, specific gene DNA was only found in hemopoietic cells--in bone marrow, spleen, thymus and lymphocytes. Transcription of the gene mts271 is not dependent on the level of DNA methylation.


Subject(s)
DNA, Neoplasm/genetics , DNA/genetics , Transcription, Genetic , Animals , Cells, Cultured , Clone Cells , DNA/isolation & purification , DNA, Neoplasm/isolation & purification , Gene Expression , Methylation , Mice , Neoplasm Metastasis , Nucleic Acid Hybridization , RNA/genetics , RNA/isolation & purification , RNA, Neoplasm/genetics , RNA, Neoplasm/isolation & purification , Tumor Cells, Cultured
9.
Genetika ; 25(5): 932-6, 1989 May.
Article in Russian | MEDLINE | ID: mdl-2744442

ABSTRACT

Gene cloning was used with a view to examine differences in gene expression in metastatic (CSML-100) and non-metastatic (CSML-0) cell lines. Differential screening of the cDNA libraries obtained was performed. Mts271 gene which is specifically expressed in metastatic cells was isolated.


Subject(s)
Cloning, Molecular , DNA, Neoplasm/isolation & purification , DNA/isolation & purification , Neoplasms, Experimental/genetics , Transcription, Genetic , Animals , Blotting, Southern , DNA/genetics , DNA, Neoplasm/genetics , Mice , Mice, Inbred A , Neoplasm Metastasis , Neoplasm Transplantation , Neoplasms, Experimental/pathology , Tumor Cells, Cultured
10.
Genetika ; 23(10): 1807-22, 1987 Oct.
Article in Russian | MEDLINE | ID: mdl-3121438

ABSTRACT

The nucleotide sequences of 8 genomic and 2 mRNA copies of the suffix were studied. It was found that this short repeat (265 bp) forms the last exon (73 bp) in different developmentally regulated Drosophila genes. The functioning genes contain short insertions carrying polyadenylation signals and polyadenylation sites at the same position of the suffix. It was shown that the suffix sequence is directly involved in the formation of the last splicing site and 3'-end maturation of mRNA.


Subject(s)
Genes , RNA, Messenger/genetics , Repetitive Sequences, Nucleic Acid , Animals , Base Sequence , Cloning, Molecular/methods , DNA/genetics , Drosophila melanogaster , Exons , Molecular Sequence Data , RNA Splicing , Transcription, Genetic
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