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1.
Front Pediatr ; 12: 1386310, 2024.
Article in English | MEDLINE | ID: mdl-38895192

ABSTRACT

Background: Staphylococcus aureus infections are a significant cause of morbidity and mortality in pediatric populations worldwide. The Staphylo Research Network conducted an extensive study on pediatric patients across Colombia from 2018 to 2021. The aim of this study was to describe the epidemiological and microbiological characteristics of S. aureus in this patient group. Methods: We analyzed S. aureus isolates from WHONET-reporting centers. An "event" was a positive culture isolation in a previously negative individual after 2 weeks. We studied center characteristics, age distribution, infection type, and antibiotic susceptibilities, comparing methicillin sensitive (MSSA) and resistant S. aureus (MRSA) isolates. Results: Isolates from 20 centers across 7 Colombian cities were included. Most centers (80%) served both adults and children, with 55% offering oncology services and 85% having a PICU. We registered 8,157 S. aureus culture isolations from 5,384 events (3,345 MSSA and 1,961 MRSA) in 4,821 patients, with a median age of 5 years. Blood (26.2%) and skin/soft tissue (18.6%) were the most common infection sources. Most isolates per event remained susceptible to oxacillin (63.2%), clindamycin (94.3%), and TMP-SMX (98.3%). MRSA prevalence varied by city (<0.001), with slightly higher rates observed in exclusively pediatric hospitals. In contrast, the MRSA rate was somewhat lower in centers with Antimicrobial Stewardship Program (ASP). MRSA was predominantly isolated from osteoarticular infections and multiple foci, while MSSA was more frequently associated with recurrent infections compared to MRSA. Conclusions: This is the largest study of pediatric S. aureus infections in Colombia. We found MSSA predominance, but resistance have important regional variations. S. aureus remains susceptible to other commonly used antibiotics such as TMP-SMX and clindamycin. Ongoing monitoring of S. aureus infections is vital for understanding their behavior in children. Prospective studies within the Staphylored LATAM are underway for a more comprehensive clinical and genetic characterization.

2.
BMC Oral Health ; 23(1): 772, 2023 10 20.
Article in English | MEDLINE | ID: mdl-37858108

ABSTRACT

BACKGROUND: The relationship between oral health and specific health conditions, such as cardiovascular disease or cognitive impairment, has been extensively studied. However, the effect of oral health status on self-rated health has not been assessed. This could be relevant in older people considering that poor self-rated health status and oral diseases are highly prevalent in this population. The aim of this study was to determine the association between different parameters of oral health and self-rated health status (SRHS) in Colombian community-dwelling older adults. METHODS: This is a secondary analysis of the SABE-Colombia study performed in 2015. The dependent variable was defined as the SRHS status assessed by the question "Compared with other people, your age: Do you consider your health status to be better, equal, or worse?" We considered four independent variables: total edentulism considering the high prevalence in older people, the GOHAI score to assess self-rated oral health, and the use of fixed and removable dental prostheses as potential modifiers of oral health. An adjusted ordinal logistic regression was performed by each independent variable. RESULTS: After the exclusion of missing data, 17,945 persons were included in the final analysis. A total of 10.6% reported worse SRHS, 37.6% reported equal SRHS, and 51.6% reported better SRHS. The worse SRHS group was older and had a higher proportion of dependence, cognitive impairment, and depressive symptoms. The frequency of total edentulism and the lower mean score of GOHAI were significant in the worse SHRS group. An ordinal logistic regression for each independent variable was performed, finding that edentulism increases the probability of worse SHRS, while the GOHAI and use of removable or fixed dental prostheses increase the probability of better SRHS. CONCLUSION: We found an association between total edentulism, GOHAI Index, the use of dental prostheses (both removable and fixed), and self-rated health status, showing the relevance of oral health status to self-rated health status independent of comorbidities and geriatric syndromes. This result supports the inclusion of oral health evaluation in comprehensive geriatric assessment.


Subject(s)
Independent Living , Oral Health , Humans , Aged , Colombia/epidemiology , Health Status , Geriatric Assessment , Quality of Life
3.
Agora USB ; 22(1): 426-443, ene.-jun. 2022.
Article in Spanish | LILACS-Express | LILACS | ID: biblio-1420006

ABSTRACT

Resumen Este artículo propone a la sociología de la experiencia como instrumento teórico-conceptual para comprender el proceso de edificación de identidad profesional. Este enfoque sociológico permite analizar cualquier profesión contemporánea y ofrece otra perspectiva a quienes desean asumirlo como tema de estudio. La identidad profesional hoy obedece así, a un proceso complejo, no lineal, diferenciado y atravesado por la subjetividad, al fundamentarse en las biografías personales para consolidarse.


Abstract This article proposes the sociology of experience as a theoretical and conceptual instrument to understand the process of building professional identity. This sociological approach makes it possible to analyze any contemporary profession, and it offers another perspective to those who wish to take it on as a subject of study. Professional identity today thus obeys a complex, non-linear, differentiated, and subjective process, as it is based on personal biographies in order to consolidate itself.

4.
J Liposome Res ; 31(2): 169-176, 2021 Jun.
Article in English | MEDLINE | ID: mdl-32228210

ABSTRACT

Leishmaniasis is a parasitic disease treatable and curable, however, the chemotherapeutic agents for their treatment are limited. In South American countries, pentavalent antimonials are still the first line of treatment for cutaneous leishmaniasis with an efficacy of about 75%, but the toxicity of the drug causes serious side effects and remains as the main obstacle for treatment. New knowledge aimed to improve drug delivery into the intracellular environment is essential, especially for drugs currently used in the clinic, to develop new anti-Leishmania formulations. In the present study, we analysed the scientific literature to highlight the progress achieved in the last decade regarding the use of nanotechnology for improving the current leishmaniasis treatments. Results allowed us to conclude that the encapsulated Glucantime liposomal formulation can be improved by means of nanoparticle functionalization processes, resulting in new drug delivery systems that can be potentially proposed as alternative therapies for leishmaniasis treatment.


Subject(s)
Antiprotozoal Agents , Leishmaniasis, Cutaneous , Leishmaniasis , Nanoparticles , Antiprotozoal Agents/therapeutic use , Drug Delivery Systems , Humans , Leishmaniasis/drug therapy , Leishmaniasis, Cutaneous/drug therapy , Liposomes/therapeutic use
5.
Am J Trop Med Hyg ; 104(1): 233-239, 2021 01.
Article in English | MEDLINE | ID: mdl-33146111

ABSTRACT

Leishmania RNA virus (LRV) is a double-stranded RNA virus belonging to the Totiviridae family detected as cytoplasmic inclusions in some strains of the human parasite Leishmania spp. Experimental evidence supports the hypothesis that human coinfection with Leishmania spp.-LRV triggers an exacerbated immune response in the host that can be responsible for the observed complicated outcomes in cutaneous leishmaniasis (CL), such as mucosal leishmaniasis (ML) and treatment failure of CL. However, the reported frequencies of LRV associated with complicated outcomes in patient's series are highly variable, diminishing the relevance on the virus presence in the pathogenesis of the disease. To assess whether or not the inconsistent information about the frequency of LRV associated with CL complicated outcomes could be related to the virus detection approach, the present study evaluated the LRV presence in clinical samples using a diagnostic algorithm according to the type of the sample. In 36 samples with diagnosis of complicated forms of CL (15 of ML and 21 of CL antimony treatment failure) and six samples with non-Leishmania spp. infection, the LRV presence was assessed by RT-PCR, RT-qPCR, and nested RT-PCR. Viral load was estimated in parasite clinical isolates. By combining the methods, LRV1 presence was confirmed in 45% (9/20) of isolates and 37.5% (6/16) of the incisional biopsies. Remarkably, in some cases (4/8), LRV1 was undetectable in the isolates but present in their respective biopsies, and less frequently, the opposite was observed (1/8), suggesting the possibility of loss of parasites harboring LRV1 during the in vitro growth.


Subject(s)
Leishmania/virology , Leishmaniasis, Cutaneous/parasitology , Leishmaniasis, Cutaneous/virology , Leishmaniavirus/genetics , RNA, Viral/isolation & purification , Humans , Leishmania/classification , Leishmaniavirus/isolation & purification , Polymerase Chain Reaction/methods , Viral Load
6.
Neurol Int ; 12(1): 8401, 2020 Jul 10.
Article in English | MEDLINE | ID: mdl-32774822

ABSTRACT

Parkinson's disease (PD) has the second highest prevalence among neurodege - nerative diseases. In Colombia, PD population dynamics are currently unknown. Health records offer a unique resource to study frequency and multi-morbidity of chronic diseases. The aim of this research is to estimate prevalence and staging using administrative data (AD) provided by Health Maintenance Organizations (HMOs). A cross-sectional study was conducted using 2015 AD from two Colombian HMOs (4.312.928 beneficiaries, 9.01% of the affiliated Colombian population). PD prevalence and severity was estimated by age and sex. Prevalence was adjusted to WHO demographics. Age-adjusted PD prevalence was 205.89 per 100.000 inhabitants. Prevalence increment of 62.13% was found between those aged ≥40 years and those aged ≥50 years. Similarly, each extra decade (50-80+) represented an increment of 83.65%, 80.95%, and 35.10%. Between 40 and 89 years, males exhibited a significantly higher PD prevalence compared to females. Advanced PD was more frequent as age increased from 3.77% in the group between 40 to 49 years to 25.86% in those older than 89 years. More common related comorbidities were arterial hypertension, diabetes, and psychiatric disorders; the first two increased their frequency with age, and the last one maintained its prevalence across all age groups. AD sets are useful to estimate the prevalence and staging of PD. Prevalence of PD in Colombia is higher in men and increases with age, as well as disease severity.

7.
Biomedica ; 40(1): 185-194, 2020 03 01.
Article in Spanish | MEDLINE | ID: mdl-32220173

ABSTRACT

Introduction: Breast cancer is a worldwide public health problem; between 5% and 10% of the cases present familial aggregation explained by genes of high risk such as BRCA1 and BRCA2. The founding origin of the deletion BRCA1 3450del4 in Colombia has been previously reported. Objective: To carry out in six families from Tolima and Huila departments a descriptive analysis of the presence of the BRCA1 3450del4 mutation associated with breast cancer and familial aggregation. Materials and methods: We conducted a descriptive and cross-sectional study of six index cases with breast cancer positive for BRCA1 3450del4 that fulfilled three of the criteria established by Jalkh, et al. The genealogical trees were made using the information of the interview data (GenoPro™, version 2016). The mutation was typified in healthy and affected relatives who agreed to participate. Results: Thirty of the 78 individuals selected by convenience in the six families presented the mutation BRCA1 3450del4 six of whom developed breast cancer, one, ovarian cancer, one ovarian and breast cancer, and one prostate cancer; 21 did not present any type of neoplasm at the time of the study. Of the 30 individuals carrying the pathogenic variant, six were men, 24 were women, and 13 of these were under 30. Conclusions: In this study of families with the deletion BRCA1 3450del4 in Tolima and Huila we confirmed its association with familial aggregation of breast cancer.


Introducción. El cáncer de mama es un problema mundial de salud pública; entre el 5 y el 10 % de los casos presentan agregación familiar, lo que se explicaría por la presencia de mutaciones en genes de alto riesgo como el BRCA1 y el BRCA2. El origen fundador de la deleción BRCA1 3450del4 en Colombia ya fue reportado. Objetivo. Hacer un análisis descriptivo de seis familias del del Tolima y del Huila con la deleción BRCA1 3450del4 de la asociación de la mutación germinal, con el cáncer de mama y la agregación familiar. Materiales y métodos. Se hizo un estudio descriptivo y transversal de seis casos índice con cáncer de mama positivos para BRCA1 3450del4, que cumplían tres de los criterios establecidos por Jalkh, et al. A partir de la información de las entrevistas, se realizaron los árboles genealógicos (GenoPro™, versión 2016). Se tipificó la mutación en familiares sanos y afectados que aceptaron participar. Resultados. De los 78 individuos seleccionados por conveniencia en las seis familias, 30 presentaron la mutación BRCA1 3450del4; de ellos, seis tenían cáncer de mama, uno, cáncer de ovario, uno, cáncer de mama y ovario, y otro, cáncer de próstata; 21 no presentaban neoplasias. De los 30 individuos portadores de la variante patogénica, seis eran hombres y 24 mujeres, 13 de ellas menores de 30 años. Conclusiones. En este estudio se confirmó la asociación de la deleción BRCA1 3450del4 con el cáncer de mama de agregación familiar.


Subject(s)
BRCA1 Protein/genetics , Breast Neoplasms/genetics , Genes, BRCA1 , Sequence Deletion , Adult , Breast Neoplasms/epidemiology , Cities , Colombia/epidemiology , Cross-Sectional Studies , DNA, Neoplasm/genetics , Family Health , Female , Germ-Line Mutation , Humans , Male , Ovarian Neoplasms/genetics , Pedigree , Prostatic Neoplasms/genetics , Young Adult
8.
Biomédica (Bogotá) ; 40(1): 185-194, ene.-mar. 2020. tab, graf
Article in Spanish | LILACS | ID: biblio-1089114

ABSTRACT

Introducción. El cáncer de mama es un problema mundial de salud pública; entre el 5 y el 10 % de los casos presentan agregación familiar, lo que se explicaría por la presencia de mutaciones en genes de alto riesgo como el BRCA1 y el BRCA2. El origen fundador de la deleción BRCA1 3450del4 en Colombia ya fue reportado. Objetivo. Hacer un análisis descriptivo de seis familias del del Tolima y del Huila con la deleción BRCA1 3450del4 de la asociación de la mutación germinal, con el cáncer de mama y la agregación familiar. Materiales y métodos. Se hizo un estudio descriptivo y transversal de seis casos índice con cáncer de mama positivos para BRCA1 3450del4, que cumplían tres de los criterios establecidos por Jalkh, et al. A partir de la información de las entrevistas, se realizaron los árboles genealógicos (GenoPro™, versión 2016). Se tipificó la mutación en familiares sanos y afectados que aceptaron participar. Resultados. De los 78 individuos seleccionados por conveniencia en las seis familias, 30 presentaron la mutación BRCA1 3450del4; de ellos, seis tenían cáncer de mama, uno, cáncer de ovario, uno, cáncer de mama y ovario, y otro, cáncer de próstata; 21 no presentaban neoplasias. De los 30 individuos portadores de la variante patogénica, seis eran hombres y 24 mujeres, 13 de ellas menores de 30 años. Conclusiones. En este estudio se confirmó la asociación de la deleción BRCA1 3450del4 con el cáncer de mama de agregación familiar.


Introduction: Breast cancer is a worldwide public health problem; between 5% and 10% of the cases present familial aggregation explained by genes of high risk such as BRCA1and BRCA2. The founding origin of the deletion BRCA1 3450del4 in Colombia has been previously reported. Objective: To carry out in six families from Tolima and Huila departments a descriptive analysis of the presence of the BRCA1 3450del4 mutation associated with breast cancer and familial aggregation. Materials and methods: We conducted a descriptive and cross-sectional study of six index cases with breast cancer positive for BRCA1 3450del4 that fulfilled three of the criteria established by Jalkh, et al. The genealogical trees were made using the information of the interview data (GenoPro™, version 2016). The mutation was typified in healthy and affected relatives who agreed to participate. Results: Thirty of the 78 individuals selected by convenience in the six families presented the mutation BRCA1 3450del4 six of whom developed breast cancer, one, ovarian cancer, one ovarian and breast cancer, and one prostate cancer; 21 did not present any type of neoplasm at the time of the study. Of the 30 individuals carrying the pathogenic variant, six were men, 24 were women, and 13 of these were under 30. Conclusions: In this study of families with the deletion BRCA1 3450del4 in Tolima and Huila we confirmed its association with familial aggregation of breast cancer.


Subject(s)
Breast Neoplasms/genetics , Chromosome Deletion , Genes, BRCA1 , Mutation
9.
Expert Rev Pharmacoecon Outcomes Res ; 20(6): 587-593, 2020 Dec.
Article in English | MEDLINE | ID: mdl-31627711

ABSTRACT

Objective: To estimate all-claims-all-conditions expenditures paid for by health plans for patients suffering from Parkinson´s disease (PD). Methods: Using administrative claims data from two health maintenance organizations for 2014 and 2015 in Colombia, we identified 2,917 patients with PD by applying an algorithm that uses International Statistical Classification of Diseases and Related Health Problems and Anatomical Therapeutic Chemical Classification System codes. Descriptive statistics were applied to compute unadjusted all-cause median costs. A generalized linear model was used to estimate adjusted and attributable direct costs of advanced PD. Results: Approximately 30% of the all-cause direct costs were associated with technologies not included in universal health coverage benefit packages. In 2015, the annual median interquartile range per patient all-cause direct costs to insurers was USD1,576 (605-3,617). About 16% of patients had advanced PD. Regression analysis estimated that additional costs attributable to advanced PD was USD3,416 (p = 0.000). Multimorbidity was highly prevalent, and 96% of PD patients had at least one other chronic condition. Conclusions: In the context of high judicialization, patients suffering from PD must increasingly use the judicial system to access treatment. To promote more equitable and efficient access benefit packages, developing countries must consider more thoroughly the needs of these patients.


Subject(s)
Health Care Costs/statistics & numerical data , Health Maintenance Organizations/economics , Parkinson Disease/economics , Adult , Aged , Aged, 80 and over , Colombia , Female , Health Expenditures/statistics & numerical data , Health Maintenance Organizations/statistics & numerical data , Humans , Insurance, Health/economics , Insurance, Health/standards , Male , Middle Aged , Parkinson Disease/therapy
10.
Rev. colomb. anestesiol ; 47(4): 261-263, Oct-Dec. 2019. tab
Article in English | LILACS, COLNAL | ID: biblio-1042740

ABSTRACT

Upon carefully reading Gómez-Duarte's1 editorial on the need to restrict the use of dipyrone due to its adverse and potentially lethal effects, we thought that some of the expressed ideas must be reviewed in detail in the light of current controversies and methodological limitations of the available evidence, for the purpose of making better decisions regarding its clinical use. The editorial does not cover dipyrone's analgesic effectiveness. The lack of studies directly comparing dipyrone to other analgesic drugs limits the assessment of its effectiveness. However, the number needed to treat (NNT) to reduce pain by 50% has been used as an indirect measurement, which allows to objectively approach to the comparative differences among different analgesic drugs. Cochrane's meta-analysis estimated that low dipyrone doses (500 mg) are associated with a NNT of 2.4 (95% confidence interval [CI] 1.9-3.2), with an effect magnitude comparable to that of drugs such as diclofenac 50mg, ibuprofen 400mg, and naproxen 550mg, and higher than that of celecoxib 200 mg, oxycodone 15 mg, and paracetamol 1000 mg (Table 1). It is difficult to draw a definitive conclusion with respect to the effectiveness of these drugs, due to the quality of the basic studies, the heterogeneity of the population and the surgical model. Notwithstanding the foregoing, the best available evidence suggests that dipyrone is an effective drug to treat acute2 and chronic3 pain


Al leer detenidamente el editorial de Gómez-Duarte1 sobre la necesidad de restringir el uso de la dipirona por sus efectos adversos y potencialmente letales, pensamos que algunas de las ideas expresadas deben ser revisadas en detalle a la luz de las controversias actuales y las limitaciones metodológicas de la evidencia disponible, con el fin de tomar mejores decisiones sobre su uso clínico. El editorial no aborda la eficacia analgésica de la dipirona. La falta de estudios que comparen directamente la dipirona con otros fármacos analgésicos limita la evaluación de su eficacia. Sin embargo, se ha utilizado como medida indirecta el número necesario a tratar (NNT) para reducir el dolor en un 50%, lo que permite aproximarse objetivamente a las diferencias comparativas entre distintos fármacos analgésicos. El metaanálisis de Cochrane estimó que las dosis bajas de dipirona (500 mg) se asocian a un NNT de 2,4 (intervalo de confianza [IC] del 95%: 1,9-3,2), con una magnitud de efecto comparable a la de fármacos como diclofenaco 50 mg, ibuprofeno 400 mg y naproxeno 550 mg, y superior a la de celecoxib 200 mg, oxicodona 15 mg y paracetamol 1000 mg (Tabla 1). Es difícil sacar una conclusión definitiva respecto a la eficacia de estos fármacos, debido a la calidad de los estudios básicos, la heterogeneidad de la población y el modelo quirúrgico. No obstante lo anterior, la mejor evidencia disponible sugiere que la dipirona es un fármaco eficaz para tratar el dolor agudo2 y crónico3


Subject(s)
Humans , Effectiveness , Dipyrone , Pharmaceutical Preparations , Confidence Intervals , Diclofenac , Analgesics , Acetaminophen
11.
Cost Eff Resour Alloc ; 16: 32, 2018.
Article in English | MEDLINE | ID: mdl-30263015

ABSTRACT

BACKGROUND: Hypertension represents a high burden of disease in different healthcare systems. Recent guideline published in 2017 by the American Heart Association and the American College of Cardiology has generated a debate between clinicians and policymakers due to the lowering of diagnosis threshold and the subsequent increase of the prevalence and healthcare costs. No empirical research exists addressing the question about the pressure on healthcare costs generated by new standards. This study aims to quantify the impact on the hypertension diagnosis and treatment costs for healthcare system using the new hypertension guideline. METHODS: We conducted a budget impact analysis from a Colombian healthcare payer's perspective with a 3-year time horizon (2018-2020), in which we estimated the difference in total medical care costs between previous hypertension cut-off points (140/90 mmHg) and new guideline cut-off points (130/80 mmHg). RESULTS: Our results show that the impact of the adoption of the new hypertension guideline would represent a decrease close to 22% in total annual high blood pressure costs in Colombia. This reduction is mainly driven by a lower number of cardiovascular complications. It is worth noting that these results should be taken with caution due to local available data. CONCLUSIONS: A high-middle income country such as Colombia should carry out an exhaustive revision of the recommendations of the new hypertension guideline, due to its high probability of saving medical treatment costs for the healthcare system.

12.
Acta Trop ; 177: 44-50, 2018 Jan.
Article in English | MEDLINE | ID: mdl-28982577

ABSTRACT

Leishmaniasis is a vector-borne disease caused by infection by parasites from the genus Leishmania. Clinical manifestations can be visceral or cutaneous, the latter mainly being chronic ulcers. This work was aimed at evaluating Calliphoridae Lucilia sericata- and Sarconesiopsis magellanica-derived larval excretions and secretions' (ES) in vitro anti-leishmanial activity against Leishmania panamensis. Different larval-ES concentrations from both blowfly species were tested against either L. panamensis promastigotes or intracellular amastigotes using U937-macrophages as host cells. The Alamar Blue method was used for assessing parasite half maximal inhibitory concentration (IC50) and macrophage cytotoxicity (LC50). The effect of larval-ES on L. panamensis intracellular parasite forms was evaluated by calculating the percentage of infected macrophages, parasite load and toxicity. L. sericata-derived larval-ES L. panamensis macrophage LC50 was 72.57µg/mL (65.35-80.58µg/mL) and promastigote IC50 was 41.44µg/mL (38.57-44.52µg/mL), compared to 34.93µg/mL (31.65-38.55µg/mL) LC50 and 23.42µg/mL (22.48-24.39µg/mL) IC50 for S. magellanica. Microscope evaluation of intracellular parasite forms showed that treatment with 10µg/mL L. sericata ES and 5µg/mL S. magellanica ES led to a decrease in the percentage of infected macrophages and the amount of intracellular amastigotes. This study produced in vitro evidence of the antileishmanial activity of larval ES from both blowfly species on different parasitic stages and showed that the parasite was more susceptible to the ES than it's host cells. The antileishmanial effect on L. panamensis was more evident from S. magellanica ES.


Subject(s)
Diptera , Insect Proteins/pharmacology , Leishmania/drug effects , Animals , Larva , Macrophages/parasitology , Parasite Load
13.
Biomédica (Bogotá) ; 37(4): 538-547, oct.-dic. 2017. tab, graf
Article in Spanish | LILACS | ID: biblio-888498

ABSTRACT

Resumen Introducción. La leishmaniasis cutánea es una enfermedad causada por parásitos del género Leishmania que tiene gran incidencia en Colombia. El diagnóstico y la identificación de la especie infecciosa son factores críticos en el momento de escoger e iniciar el tratamiento. Actualmente, los métodos de diagnóstico y tipificación requieren procedimientos complejos, por lo que es necesario validar nuevos marcadores moleculares y métodos que simplifiquen el proceso. Objetivo. Desarrollar una herramienta basada en la reacción en cadena de la polimerasa (PCR) con curvas de fusión (High Resolution Melting; PCR-HRM) para el diagnóstico y tipificación de las tres especies de Leishmania de importancia epidemiológica en casos de leishmaniasis cutánea en Colombia. Materiales y métodos. Los genomas de Leishmania panamensis, L. braziliensis y L. guyanensis se compararon mediante métodos bioinformáticos. Las regiones específicas de especie identificadas se validaron mediante PCR. Para los marcadores seleccionados se diseñó una PCR-HRM y se estimaron algunos parámetros de validez y seguridad usando aislamientos de pacientes colombianos caracterizados previamente mediante PCR y análisis de polimorfismos en la longitud de los fragmentos de restricción (Restriction Fragment Length Polymorphism - RFLP; PCR-RFLP) del gen hsp70. Resultados. El análisis genómico comparativo mostró 24 regiones específicas de especie. Sin embargo, la validación mediante PCR solo identificó un marcador específico para cada especie de Leishmania. Los otros marcadores mostraron amplificación cruzada. El límite de detección para los tres marcadores seleccionados fue de un parásito, mientras que la sensibilidad, la especificidad, el valor predictivo positivo y el negativo fueron de 91,4, 100, 100 y 75 %, respectivamente. Conclusiones. Las tres regiones seleccionadas pueden emplearse como marcadores moleculares en el diagnóstico y tipificación de las especies causantes de la leishmaniasis cutánea en Colombia.


Abstract Introduction: Cutaneous leishmaniasis, caused by parasites of the genus Leishmania, is a disease with high incidence in Colombia. The diagnosis and identification of the infectious species are critical factors when selecting and initiating treatment. Currently, the methods for diagnosing and typing cutaneous leishmaniasis require complicated procedures and there is a need for the validation of new molecular markers and methods to simplify the process. Objective: To develop a tool based in PCR melting curves (PCR-HRM) for the diagnosis and typing of the three Leishmania species of epidemiological importance for cutaneous leishmaniasis in Colombia. Materials and methods: The genomes of Leishmania panamensis, L. braziliensis and L. guyanensis were compared with bioinformatic methods. The species-specific regions were then validated using PCR. For the selected markers, a PCR-HRM was designed, and validity and security parameters were estimated using isolates from Colombian patients previously characterized by PCR-RFLP of the hsp70 gene. Results: The comparative genomic analysis yielded 24 species-specific regions. However, the PCR validation identified only one marker that was specific to each Leishmania species. The other markers showed cross amplification. The detection limit for the three selected markers was one parasite. The sensitivity, specificity, predictive positive and negative values were 91.4%, 100%, 100% and 75%, respectively. Conclusions: The three selected regions can be used as molecular markers in the diagnosis and typing of the causative species of cutaneous leishmaniasis in Colombia.


Subject(s)
Humans , Leishmania braziliensis/classification , Leishmania braziliensis/genetics , Polymerase Chain Reaction , Leishmaniasis, Cutaneous/diagnosis , Leishmania guyanensis/classification , Colombia
14.
Travel Med Infect Dis ; 18: 57-66, 2017.
Article in English | MEDLINE | ID: mdl-28487212

ABSTRACT

OBJECTIVE: Geographical information systems (GIS) have been demonstrated earlier to be of great use to inform public health action against vector-borne infectious diseases. METHODS: Using surveillance data on the ongoing ZIKV outbreak from Pereira, Colombia (2015-2016), we estimated incidence rates (cases/100,000 population), and developed maps correlating with the ecoepidemiology of the area. RESULTS: Up to October 8, 2016, 439 cases of ZIKV were reported in Pereira (93 cases/100,000 pop.), with highest rates in the South-West area. At the corregiments (sub-municipalities) of Pereira, Caimalito presented the highest rate. An urban area, Cuba, has 169 cases/100,000 pop., with a low economical level and the highest Aedic index (9.1%). Entomological indexes were associated with ZIKV incidence at simple and multiple non-linear regressions (r2 > 0.25; p < 0.05). CONCLUSIONS: Combining entomological, environmental, human population density, travel patterns and case data of vector-borne infections, such as ZIKV, leads to a valuable tool that can be used to pinpoint hotspots also for infections such as dengue, chikungunya and malaria. Such a tool is key to planning mosquito control and the prevention of mosquito-borne diseases in local populations. Such data also enable microepidemiology and the prediction of risk for travelers who visit specific areas in a destination country.


Subject(s)
Disease Outbreaks , Rural Population/statistics & numerical data , Travel , Urban Population/statistics & numerical data , Zika Virus Infection , Animals , Colombia/epidemiology , Culicidae/virology , Disease Outbreaks/prevention & control , Disease Outbreaks/statistics & numerical data , Geographic Information Systems , Humans , Incidence , Larva/virology , Public Health , Travel Medicine , Zika Virus Infection/epidemiology , Zika Virus Infection/prevention & control , Zika Virus Infection/transmission
15.
Biomedica ; 37(4): 538-547, 2017 Dec 01.
Article in English | MEDLINE | ID: mdl-29518886

ABSTRACT

Introducción. La leishmaniasis cutánea es una enfermedad causada por parásitos del género Leishmania que tiene gran incidencia en Colombia. El diagnóstico y la identificación de la especie infecciosa son factores críticos en el momento de escoger e iniciar el tratamiento. Actualmente, los métodos de diagnóstico y tipificación requieren procedimientos complejos, por lo que es necesario validar nuevos marcadores moleculares y métodos que simplifiquen el proceso.Objetivo. Desarrollar una herramienta basada en la reacción en cadena de la polimerasa (PCR) con curvas de fusión (High Resolution Melting; PCR-HRM) para el diagnóstico y tipificación de las tres especies de Leishmania de importancia epidemiológica en casos de leishmaniasis cutánea en Colombia.Materiales y métodos. Los genomas de Leishmania panamensis, L. braziliensis y L. guyanensis se compararon mediante métodos bioinformáticos. Las regiones específicas de especie identificadas se validaron mediante PCR. Para los marcadores seleccionados se diseñó una PCR-HRM y se estimaron algunos parámetros de validez y seguridad usando aislamientos de pacientes colombianos caracterizados previamente mediante PCR y análisis de polimorfismos en la longitud de los fragmentos de restricción (Restriction Fragment Length Polymorphism - RFLP; PCR-RFLP) del gen hsp70.Resultados. El análisis genómico comparativo mostró 24 regiones específicas de especie. Sin embargo, la validación mediante PCR solo identificó un marcador específico para cada especie de Leishmania. Los otros marcadores mostraron amplificación cruzada. El límite de detección para los tres marcadores seleccionados fue de un parásito, mientras que la sensibilidad, la especificidad, el valor predictivo positivo y el negativo fueron de 91,4, 100, 100 y 75 %, respectivamente.Conclusiones. Las tres regiones seleccionadas pueden emplearse como marcadores moleculares en el diagnóstico y tipificación de las especies causantes de la leishmaniasis cutánea en Colombia.


Subject(s)
Leishmania braziliensis/classification , Leishmania braziliensis/genetics , Leishmania guyanensis/classification , Leishmaniasis, Cutaneous/diagnosis , Polymerase Chain Reaction , Colombia , Humans
16.
PLoS Negl Trop Dis ; 10(5): e0004739, 2016 05.
Article in English | MEDLINE | ID: mdl-27243811

ABSTRACT

BACKGROUND: American cutaneous leishmaniasis (ACL) is a complicated disease producing about 67.000 new cases per year. The severity of the disease depends on the parasite species; however in the vast majority of cases species confirmation is not feasible. WHO suggestion for ACL produced by Leishmania braziliensis, as first line treatment, are pentavalent antimonial derivatives (Glucantime or Sodium Stibogluconate) under systemic administration. According to different authors, pentavalent antimonial derivatives as treatment for ACL show a healing rate of about 75% and reasons for treatment failure are not well known. METHODS: In order to characterise the clinical and parasitological features of patients with ACL that did not respond to Glucantime, a cross-sectional observational study was carried out in a cohort of 43 patients recruited in three of the Colombian Army National reference centers for complicated ACL. Clinical and paraclinical examination, and epidemiological and geographic information were recorded for each patient. Parasitological, histopathological and PCR infection confirmation were performed. Glucantime IC50 and in vitro infectivity for the isolated parasites were estimated. RESULTS: Predominant infecting Leishmania species corresponds to L. braziliensis (95.4%) and 35% of the parasites isolated showed a significant decrease in in vitro Glucanatime susceptibility associated with previous administration of the medicament. Lesion size and in vitro infectivity of the parasite are negatively correlated with decline in Glucantime susceptibility (Spearman: r = (-)0,548 and r = (-)0,726; respectively). CONCLUSION: A negative correlation between lesion size and parasite resistance is documented. L. braziliensis was found as the main parasite species associated to lesion of patients that underwent treatment failure or relapse. The indication of a second round of treatment in therapeutic failure of ACL, produced by L. braziliensis, with pentavalent antimonial derivatives is discussable.


Subject(s)
Antiprotozoal Agents/therapeutic use , Leishmania braziliensis/drug effects , Leishmaniasis, Cutaneous/drug therapy , Meglumine/therapeutic use , Organometallic Compounds/therapeutic use , Adult , Antiprotozoal Agents/pharmacology , Cohort Studies , Cross-Sectional Studies , Humans , Inhibitory Concentration 50 , Leishmania braziliensis/physiology , Male , Meglumine/pharmacology , Meglumine Antimoniate , Organometallic Compounds/pharmacology , Recurrence , Treatment Failure , U937 Cells , Young Adult
17.
J Clin Endocrinol Metab ; 10(3): 1098-1103, 2016 03 01.
Article in English | MEDLINE | ID: mdl-26691890

ABSTRACT

CONTEXT: A recent study reported the non-synonymous G534E (rs7080536, allele A) variant in the HABP2 gene as causal in familial non-medullary thyroid cancer (NMTC). OBJECTIVE: The objective of this study was to evaluate the causality of HABP2 G534E in the TCUKIN study, a multi-center population based study of NMTC cases from the British Isles. DESIGN AND SETTING: A case-control analysis of rs7080536 genotypes was performed using 2,105 TCUKIN cases and 5,172 UK controls. PARTICIPANTS: Cases comprised 2,105 NMTC cases. Patients sub-groups with papillary (N=1,056), follicular (N=691) and Hurthle cell (N=86) TC cases were studied separately. Controls comprised 5,172 individuals from the 1958 Birth Cohort (58C) and the National Blood Donor Service (NBS) study. The controls had previously been genotyped using genome-wide SNP arrays by the Wellcome Trust Case Control Consortium study. OUTCOME: Measures: Association between HABP2 G534E (rs7080536A) and NMTC risk was evaluated using logistic regression. RESULTS: The frequency of HABP2 G534E was 4.2% in cases and 4.6% in controls. We did not detect an association between this variant and NMTC risk (OR=0.896, 95% CI: 0.746-1.071, P=0.233). We also failed to detect an association between HABP2 G534E and cases with papillary (1056 cases, G534E frequency= 3.5%, OR=0.74, P=0.017), follicular (691 cases, G534E frequency= 4.7%, OR=1.00, P=1.000) or Hurthle cell (86 cases, G534E frequency= 6.3%, OR=1.40, P=0.279) histology. CONCLUSIONS: We found that HABP2 G534E is a low-to-moderate frequency variant in the British Isles and failed to detect an association with NMTC risk, independent of histological type. Hence, our study does not implicate HABP2 G534E or a correlated polymorphism in familial NMTC and additional data are required before using this variant in NMTC risk assessment.

19.
Investig. andin ; 17(30): 1238-1248, abr. 2015.
Article in Spanish | LILACS | ID: lil-754767

ABSTRACT

Objetivo: determinar el efecto de un programa de ejercicio seguido de un periodo de reposo post-intervención en marcadores de riesgo cardiovascular de un grupo de escolares de un Colegio de Cali-Colombia. Materiales y métodos: estudio experimental en el que se incluyeron 26 escolares con edades entre 10 y 13 años. Estos se sometieron a un período (4 meses) de intervención con ejercicio seguido de un periodo de reposo. Cambios en: glucosa y perfil lipídico; variables antropométricas; y parámetros de capacidad física, fueron evaluados. Resultados: los niños mostraron mayores valores de porcentaje (%) grasa corporal, cHDL, VO2max, carga y lactato al finalizar la intervención con ejercicio, e incremento significante en el valor de glicemia, IMC y % grasa corporal respecto al final del periodo de reposo post-intervención. En las niñas solo se observó incremento en la mediana de la carga luego de intervención con ejercicio. En el periodo de reposo post-intervención el IMC, porcentaje de grasa corporal y glicemia fueron más altos, y el valor de carga menor en comparación con el final de la intervención con ejercicio. Conclusiones: los niños presentaron mejor respuesta al ejercicio en variables relacionadas con riesgo cardiovascular, y este hallazgo podría estar influenciado por actividad física espontanea en los varones. En la mayoría de variables se observaron cambios negativos tras el periodo de reposo post-intervención. Para el conocimiento de los autores, este ensayo representa una primera exploración del efecto de un periodo sedentario tras un programa de ejercicio en el perfil cardiovascular de un grupo de escolares.


Objective: to determine the effect of an exercise program followed by a rest period post-intervention on cardiovascular risk markers in a group of children of Cali-Colombia school. Materials: experimental study which included 26 children aged 10-13 years old. These were subjected to a exercise intervention period (4 months) followed by a rest period. Changes in: glucose and lipid profile, anthropometric variables, and parameters of physical capacity, were evaluated. Results:boys showed higher values of body fat percentage, cHDL, VO2max, load and lactate at the end of the exercise intervention, and significant increase in the value of blood glucose, BMI and body fat percentage at the end of the post-intervention rest period. In girls only was observed an increase in load median after exercise intervention. In the post-intervention rest period BMI, body fat percentage and blood glucose were higher and the load value was lower compared to the end of the exercise intervention. Conclusions: boys had a better response to exercise in variables related to cardiovascular risk, and this finding could be influenced by spontaneous physical activity in men. In most of the variables, negative changes were observed after the post-intervention rest period. To the author’s knowledge, this paper represents a first exploration of the effect of a sedentary period after an exercise program on the cardiovascular profile of a schoolchildren group.


Objetivo: determinar o efeito de um programa de exercícios seguidos por um período de pós-intervenção nos marcadores de risco cardiovascular em um grupo de resto escolares de Cali Colombia.Materiais: estudo experimental em que 26 alunos foram incluídos com idades entre 10 e 13 anos. Estes foram submetidos a um período (4 meses ), seguido intervenção de exercício com um período de descanso. Mudanças: glicose e do perfil lipídico; variáveis antropométricas ; e foram avaliados parâmetros de capacidade física Resultado: as crianças apresentaram maior percentagem (%) de gordura corporal, o cHDL, VO2max, de carga e de lactato no final da intervenção de exercício, e aumento significativo na quantidade de glicose, imce % de gordura corporal em comparação com o fim de período de descanso pós-intervenção. Em raparigas foi observado aumento apenas no meio de carga, após a intervenção do exercício. No período de descanso pós-intervenção imc, percentual de gordura e de glicose no sangue foram maiores e menor valor de carga em relação ao final da intervenção de exercícios.Conclusões: as crianças apresentaram melhor resposta ao exercício em variáveis relacionadas ao risco cardiovascular, e este achado poderia ser influenciada pela atividade física espontânea em homens. Na maioria das variáveis foram observadas variações negativas depois do período de descanso pós-intervenção. Para o conhecimento dos autores , este estudo representa a primeira análise do efeito de um período sedentário após um programa de exercício no perfil cardiovascular de um grupo de crianças em idade escolar


Subject(s)
Humans , Child , Cardiovascular Diseases , Exercise Tolerance , Risk Factors
20.
PLoS Genet ; 11(3): e1004925, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25781923

ABSTRACT

Children affected by Specific Language Impairment (SLI) fail to acquire age appropriate language skills despite adequate intelligence and opportunity. SLI is highly heritable, but the understanding of underlying genetic mechanisms has proved challenging. In this study, we use molecular genetic techniques to investigate an admixed isolated founder population from the Robinson Crusoe Island (Chile), who are affected by a high incidence of SLI, increasing the power to discover contributory genetic factors. We utilize exome sequencing in selected individuals from this population to identify eight coding variants that are of putative significance. We then apply association analyses across the wider population to highlight a single rare coding variant (rs144169475, Minor Allele Frequency of 4.1% in admixed South American populations) in the NFXL1 gene that confers a nonsynonymous change (N150K) and is significantly associated with language impairment in the Robinson Crusoe population (p = 2.04 × 10-4, 8 variants tested). Subsequent sequencing of NFXL1 in 117 UK SLI cases identified four individuals with heterozygous variants predicted to be of functional consequence. We conclude that coding variants within NFXL1 confer an increased risk of SLI within a complex genetic model.


Subject(s)
Apraxias/genetics , Carrier Proteins/genetics , Exome/genetics , Genetic Association Studies , Membrane Proteins/genetics , Apraxias/pathology , Child , Child, Preschool , Female , Genetic Predisposition to Disease , Genetics, Population , High-Throughput Nucleotide Sequencing , Humans , Male
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