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1.
Clin Microbiol Infect ; 20(6): O344-52, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24118431

ABSTRACT

Extended-spectrum ß-lactamase (ESBL) -producing Enterobacteriaceae have been notifiable according to the Swedish Communicable Disease Act since 2007. A major increase in the number of cases has been observed, with 2099 cases in 2007 and 7225 cases in 2012. The majority of the isolates are Escherichia coli. Additionally, Swedish data on the prevalence of ESBL-producing invasive isolates of E. coli are available through EARS-Net, and through biannual point prevalence studies, where molecular characterization of isolates from the entire country is carried out. This paper describes major trends in the Swedish epidemiology of ESBL-producing E. coli in the period 2007-2012. Isolates from the point prevalence studies were subjected to antimicrobial susceptibility testing, ESBL genotyping, pulsed-field gel electrophoresis, multi-locus sequence typing and phylogenetic grouping with PCR. The distribution of sequence types, resistance genes and susceptibility levels were all stable over the three study periods. The dominating resistance gene conferring ESBL was blaCTX -M-15 , found in 54-58% of the isolates. ST131 represented 34-38% of the isolates. Other major sequence types were ST38, ST69, ST405, ST617 and ST648, each representing 2-6% of the isolates. Phylogenetic group B2 was the most common, and was observed in 41-47% of the isolates. However, among ST131 isolates the B2 phylogenetic group represented 90-98% of the isolates. The most important epidemiological difference seen over time was that the median age of infected women decreased from 62 to 52 years (p <0.0001) and infected men from 67 to 64 years. A potential explanation might be the shift towards a higher proportion of community-acquired infections in individuals lacking comorbidities.


Subject(s)
Escherichia coli Infections/epidemiology , Escherichia coli Infections/microbiology , Escherichia coli/enzymology , beta-Lactamases/metabolism , Adult , Aged , Aged, 80 and over , Cluster Analysis , Electrophoresis, Gel, Pulsed-Field , Escherichia coli/isolation & purification , Female , Genotype , Genotyping Techniques , Humans , Male , Microbial Sensitivity Tests , Middle Aged , Molecular Epidemiology , Multilocus Sequence Typing , Phylogeny , Prevalence , Sweden/epidemiology , Young Adult , beta-Lactamases/genetics
2.
Eur J Clin Microbiol Infect Dis ; 32(9): 1205-10, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23549664

ABSTRACT

The phenotypic detection of plasmid-acquired AmpC (pAmpC) in Escherichia coli is challenging, and molecular methods are required for confirmation. In addition to cefoxitin resistance, multiresistance and high-level resistance to cephalosporins have both been suggested as criteria for targeting isolates with pAmpC, but data to support these proposed criteria are lacking. A Swedish collection of 378 isolates with either putative chromosomal hyperproduction of AmpC (cAmpC) or pAmpC were subjected to disk diffusion and minimum inhibitory concentration (MIC) determination with the Etest. The frequency of resistance to gentamicin, ciprofloxacin, and trimethoprim among cAmpC and pAmpC was compared to elucidate the issue of multidrug resistance. Lastly, methods for the phenotypic confirmation of pAmpC were compared. One in-house disk diffusion method, one method employing NeoSensitabs (Rosco), and one Etest method (bioMérieux) were compared. The analysis of histograms based on both disk diffusion and the Etest showed that resistance [according to the European Committee on Antimicrobial Susceptibility Testing (EUCAST)] to cefotaxime and/or ceftazidime occurred in almost all isolates. By coining resistance instead of non-susceptibility, the number of isolates required to subject to phenotypic testing/genotypic confirmation dropped by more than 40 %, without compromising the sensitivity substantially. Further, almost 70 % of isolates with pAmpC were non-multidrug resistant, clearly indicating that this is an inappropriate criterion for further investigation. The phenotypic tests all had more than 90 % sensitivity, and the best sensitivities were obtained with the in-house method and with the ceftazidime ± cloxacillin NeoSensitab. In conclusion, clinical resistance to cefotaxime and/or ceftazidime seems to be an appropriate criterion for pAmpC screening, and several phenotypic methods perform well for the phenotypic confirmation of AmpC production prior to genotypic confirmation.


Subject(s)
Bacterial Proteins/genetics , Escherichia coli/drug effects , Escherichia coli/genetics , Microbial Sensitivity Tests/methods , Plasmids/genetics , beta-Lactamases/genetics , Anti-Bacterial Agents/pharmacology , Ciprofloxacin/pharmacology , Escherichia coli/isolation & purification , Gentamicins/pharmacology , Humans , Plasmids/drug effects , Trimethoprim/pharmacology , beta-Lactam Resistance/genetics
3.
Clin Microbiol Infect ; 19(7): E309-11, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23581796

ABSTRACT

A selection of plasmid-mediated AmpC-producing Escherichia coli isolates carrying blaCMY-2 from Swedish broilers were characterized to establish their relatedness to and a possible overlap with human clinical E. coli isolates. The results showed diversity among the E. coli isolated from broilers, indicating that the spread in the population was not due to one strain. However, only one type of plasmid belonging to replicon type incK was identified. Furthermore, there were no indications of spread of blaCMY-2 E. coli isolates from broilers to human clinical settings, although Swedish broilers may be a source of blaCMY-2 and/or the plasmid carrying blaCMY-2 .


Subject(s)
Bacterial Proteins/genetics , Chickens/microbiology , Escherichia coli Infections/microbiology , Escherichia coli Infections/veterinary , Escherichia coli/classification , Escherichia coli/isolation & purification , Plasmids , beta-Lactamases/genetics , Animals , Escherichia coli/drug effects , Escherichia coli/genetics , Escherichia coli Infections/epidemiology , Genetic Variation , Genotype , Humans , Molecular Epidemiology , Multilocus Sequence Typing , Sweden/epidemiology
4.
Eur J Clin Microbiol Infect Dis ; 30(10): 1159-62, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21399889

ABSTRACT

The aim of this study was to investigate the prevalence of extended-spectrum beta-lactamase (ESBL)-producing bacteria in patients at various hospital wards and in a group of relatively healthy volunteers, in order to obtain greater knowledge on how common these bacterial strains are in hospital settings and in the general community. Participants (n = 427) were enrolled at a University Hospital and at Primary Health Care Units (PHCUs) in Sweden in 2008 and 2010. The participants provided rectal swabs, which were tested for the occurrence of ESBL-producing bacteria. Positive samples were analysed with polymerase chain reaction (PCR) methods for bacterial strain typing and ESBL phylogroups. In 2008, the prevalence was 2.1% (2/96) in PHCU subjects and 1.8% (2/113) in hospital patients. In 2010, the prevalence was 3.0% (3/100) in PHCU subjects and 6.8% (8/118) in hospital patients. The dominating phylogroups were CTX-M-1 and CTX-M-9. All ESBL-positive isolates were Escherichia coli. We found a higher prevalence of ESBL faecal carriage than expected, both in the hospital setting and in the PHCU group.


Subject(s)
Escherichia coli/enzymology , Feces/microbiology , beta-Lactamases/metabolism , Adult , Aged , Aged, 80 and over , Escherichia coli/classification , Escherichia coli/genetics , Escherichia coli/isolation & purification , Female , Genotype , Hospitals, University , Humans , Male , Middle Aged , Phylogeny , Polymerase Chain Reaction , Prevalence , Sweden , beta-Lactamases/genetics
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