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1.
Arch Biochem Biophys ; 751: 109848, 2024 01.
Article in English | MEDLINE | ID: mdl-38065249

ABSTRACT

Lysozyme complexes with amikacin and levofloxacin were studied by spectroscopy approaches as well as using a tritium probe. Tritium was used as a labeling agent to trace labeled compound concentration in a system of two immiscible liquids and in the atomic form to determine the possible position of the binding site. Co-adsorption of protein and drug at the liquid-liquid interface was analyzed by scintillation phase method that allowed us to directly determine the amount of protein and drug in the mixed adsorption layer. Also, tensiometric measuring of the interfacial tension was used for calculation of binding parameters accordingly to Fainerman model. The treatment of complexes with atomic tritium followed by trypsinolysis and analysis of tritium distribution in the lysozyme peptides reveals the binding sites, binding energies in which were analyzed using molecular docking. Formation of complexes with amikacin and levofloxacin preserves secondar structure of protein. However, the formation of complex with amikacin leads to the almost total loss of the enzymatic activity of lysozyme and the redshift of the maximum on the lysozyme fluorescence band. A slight decrease in the distribution coefficient of lysozyme in the presence of amikacin assumes that the complex has higher hydrophilicity in comparison to lysozyme without additives. The most favorable for binding were the positions of the active centers that included amino acids Asp52 and Glu35, as well as in the vicinity of peptide His15-Arg21, with the participation of amino acids Tyr20, Arg14. In the case of levofloxacin, the formation of lysozyme-ligand complex in aqueous solution is possible without changing the microenvironment of the active center of the protein. Binding of levofloxacin to the active center of the enzyme was the most favorable, but Asp52 and Glu35 that are responsible for the enzymatic activity of lysozyme, were not affected.


Subject(s)
Amikacin , Muramidase , Molecular Docking Simulation , Muramidase/chemistry , Tritium/chemistry , Levofloxacin , Spectrometry, Fluorescence , Peptides , Amino Acids
2.
Inorg Chem ; 57(23): 14895-14903, 2018 Dec 03.
Article in English | MEDLINE | ID: mdl-30411622

ABSTRACT

A mechanism was established for the formation of nanosized iron carbide particles encapsulated in carbon shells via the processes of ferrocene thermal conversions at high pressures. At a pressure of 8.0 GPa, products of ferrocene decomposition were studied as a function of temperature by X-ray diffraction, Raman and Mössbauer spectroscopy, scanning and transmission electron microscopy. It was shown that the mechanism of formation of the carbon-encapsulated iron carbide nanoparticles at high pressures and temperatures differs qualitatively from the known mechanism of their formation in the gas-phase processes of laser pyrolysis or photolysis of ferrocene. At high pressures and temperatures, the formation of iron carbide nanoparticles occurs not due to the primary growth of pure iron particles and the subsequent dissolution of carbon in iron. Nanoparticles are formed due to the direct fusion of iron-carbon clusters, which are formed at intermediate stages of ferrocene thermal destruction. Then, obtained amorphous iron carbides Fe1- xC x with a high carbon content start to crystallize. Two crystalline carbon-encapsulated forms of iron carbide (Fe7C3 and Fe3C) are the main products of crystallization of the amorphous Fe1- xC x depending on the temperature of the ferrocene treatment.

3.
Dalton Trans ; 47(32): 11239-11244, 2018 Aug 14.
Article in English | MEDLINE | ID: mdl-30058661

ABSTRACT

Precipitates formed by the neutralisation of Pu(iii), Pu(iv), Pu(v), and Pu(vi) solutions were characterised by HRTEM, SAXS, and XRD in the suspensions. PuO2 nanoparticles uniform in size (typical diameter around 2.5 nm) and phase composition were observed in all cases under equilibrium conditions. For Pu(vi), the precipitation reactions proceed via an intermediate product.

4.
ACS Appl Mater Interfaces ; 10(24): 20983-20994, 2018 Jun 20.
Article in English | MEDLINE | ID: mdl-29847909

ABSTRACT

3D frameworks of carbon nanotubes (CNTs) uniformly decorated by cobalt oxide or carbon-encapsulated cobalt nanoparticles were obtained by spark plasma sintering for the first time. The influence of the sintering temperature ( TS) and Co content on the morphology, structure, and electrical and magnetic properties of the obtained materials was investigated by Raman spectroscopy, electron microscopy, X-ray photoelectron spectroscopy, X-ray diffraction, and in situ magnetometry. It was shown that application of the SPS technique allowed simultaneous compaction of the material, formation of CNT framework, and Co oxide reduction. The appearance of the carbon shell around 4-10 nm Co particles was observed at TS > 600 °C. At higher TS, the Co particle size increased (up to 300 nm at 1400 °C), whereas the carbon shell ordered and thickened. The formation of large-size few-layers graphene sheets was observed at TS = 1400 °C. Electrical conductivity of the composites was found to be higher than that of sintered pristine CNTs and varied in the range of 500-12 500 Sm/m. Magnetic experiments demonstrated soft magnetization of the samples and the coercivity of 200-300 Oe. Thus, the obtained CNT-based material is simultaneously compact, formable, electroconductive, and ferromagnetic. Its properties can be tuned by variation of the sintering parameters. Synthesized cobalt-modified carbon 3D structures are promising for the application in magnetic separation, catalysis, fuel cells, and electromagnetic shielding.

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