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1.
Metallomics ; 15(1)2023 01 10.
Article in English | MEDLINE | ID: mdl-36702557

ABSTRACT

Iron regulatory proteins (IRPs) control the translation of animal cell mRNAs encoding proteins with diverse roles. This includes the iron storage protein ferritin and the tricarboxylic cycle (TCA) enzyme mitochondrial aconitase (ACO2) through iron-dependent binding of IRP to the iron responsive element (IRE) in the 5' untranslated region (UTR). To further elucidate the mechanisms allowing IRPs to control translation of 5' IRE-containing mRNA differentially, we focused on Aco2 mRNA, which is weakly controlled versus the ferritins. Rat liver contains two classes of Aco2 mRNAs, with and without an IRE, due to alterations in the transcription start site. Structural analysis showed that the Aco2 IRE adopts the canonical IRE structure but lacks the dynamic internal loop/bulge five base pairs 5' of the CAGUG(U/C) terminal loop in the ferritin IREs. Unlike ferritin mRNAs, the Aco2 IRE lacks an extensive base-paired flanking region. Using a full-length Aco2 mRNA expression construct, iron controlled ACO2 expression in an IRE-dependent and IRE-independent manner, the latter of which was eliminated with the ACO23C3S mutant that cannot bind the FeS cluster. Iron regulation of ACO23C3S encoded by the full-length mRNA was completely IRE-dependent. Replacement of the Aco23C3S 5' UTR with the Fth1 IRE with base-paired flanking sequences substantially improved iron responsiveness, as did fusing of the Fth1 base-paired flanking sequences to the native IRE in the Aco3C3S construct. Our studies further define the mechanisms underlying the IRP-dependent translational regulatory hierarchy and reveal that Aco2 mRNA species lacking the IRE contribute to the expression of this TCA cycle enzyme.


Subject(s)
Iron , RNA-Binding Proteins , Animals , Rats , Iron/metabolism , RNA-Binding Proteins/chemistry , Protein Biosynthesis , Ferritins/metabolism , Iron-Regulatory Proteins/genetics , Iron-Regulatory Proteins/metabolism , Aconitate Hydratase/genetics , Aconitate Hydratase/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Nucleic Acid Conformation
2.
J Nutr ; 152(4): 909-913, 2022 04 01.
Article in English | MEDLINE | ID: mdl-35022760
3.
Am J Physiol Renal Physiol ; 322(1): F89-F103, 2022 01 01.
Article in English | MEDLINE | ID: mdl-34843656

ABSTRACT

Chronic kidney disease involves disturbances in iron metabolism including anemia caused by insufficient erythropoietin (EPO) production. However, underlying mechanisms responsible for the dysregulation of cellular iron metabolism are incompletely defined. Using the unilateral ureteral obstruction (UUO) model in Irp1+/+ and Irp1-/- mice, we asked if iron regulatory proteins (IRPs), the central regulators of cellular iron metabolism and suppressors of EPO production, contribute to the etiology of anemia in kidney failure. We identified a significant reduction in IRP protein level and RNA binding activity that associates with a loss of the iron uptake protein transferrin receptor 1 (TfR1), increased expression of the iron storage protein subunits H- and L-ferritin, and a low but overall variable level of stainable iron in the obstructed kidney. This reduction in IRP RNA binding activity and ferritin RNA levels suggests the concomitant rise in ferritin expression and iron content in kidney failure is IRP dependent. In contrast, the reduction in the Epo mRNA level in the obstructed kidney was not rescued by genetic ablation of IRP1, suggesting disruption of normal hypoxia-inducible factor (HIF)-2α regulation. Furthermore, reduced expression of some HIF-α target genes in UUO occurred in the face of increased expression of HIF-α proteins and prolyl hydroxylases 2 and 1, the latter of which is not known to be HIF-α mediated. Our results suggest that the IRP system drives changes in cellular iron metabolism that are associated with kidney failure in UUO but that the impact of IRPs on EPO production is overridden by disrupted hypoxia signaling.NEW & NOTEWORTHY This study demonstrates that iron metabolism and hypoxia signaling are dysregulated in unilateral obstructive nephropathy. Expression of iron regulatory proteins (IRPs), central regulators of cellular iron metabolism, and the iron uptake (transferrin receptor 1) and storage (ferritins) proteins they target is strongly altered. This suggests a role of IRPs in previously observed changes in iron metabolism in progressive renal disease. Hypoxia signaling is disrupted and appeared to dominate the action of IRP1 in controlling erythropoietin expression.


Subject(s)
Anemia/etiology , Iron/metabolism , Kidney/metabolism , Renal Insufficiency/etiology , Ureteral Obstruction/complications , Anemia/metabolism , Anemia/pathology , Animals , Basic Helix-Loop-Helix Transcription Factors/genetics , Basic Helix-Loop-Helix Transcription Factors/metabolism , Cell Hypoxia , Disease Models, Animal , Erythropoietin/genetics , Erythropoietin/metabolism , Ferritins/genetics , Ferritins/metabolism , Fibrosis , Hypoxia-Inducible Factor 1, alpha Subunit/genetics , Hypoxia-Inducible Factor 1, alpha Subunit/metabolism , Hypoxia-Inducible Factor-Proline Dioxygenases/genetics , Hypoxia-Inducible Factor-Proline Dioxygenases/metabolism , Iron Regulatory Protein 1/genetics , Iron Regulatory Protein 1/metabolism , Kidney/pathology , Male , Mice, Inbred C57BL , Mice, Knockout , Procollagen-Proline Dioxygenase/genetics , Procollagen-Proline Dioxygenase/metabolism , Receptors, Transferrin/genetics , Receptors, Transferrin/metabolism , Renal Insufficiency/metabolism , Renal Insufficiency/pathology , Ureteral Obstruction/metabolism , Ureteral Obstruction/pathology
4.
J Nutr ; 152(4): 909-913, 2022 04.
Article in English | MEDLINE | ID: mdl-36967177
5.
iScience ; 24(4): 102360, 2021 Apr 23.
Article in English | MEDLINE | ID: mdl-33898949

ABSTRACT

Transferrin receptor-1 (TfR1) has essential iron transport and proposed signal transduction functions. Proper TfR1 regulation is a requirement for hematopoiesis, neurological development, and the homeostasis of tissues including the intestine and muscle, while dysregulation is associated with cancers and immunodeficiency. TfR1 mRNA degradation is highly regulated, but the identity of the degradation activity remains uncertain. Here, we show with gene knockouts and siRNA knockdowns that two Roquin paralogs are major mediators of iron-regulated changes to the steady-state TfR1 mRNA level within four different cell types (HAP1, HUVEC, L-M, and MEF). Roquin is demonstrated to destabilize the TfR1 mRNA, and its activity is fully dependent on three hairpin loops within the TfR1 mRNA 3'-UTR that are essential for iron-regulated instability. We further show in L-M cells that TfR1 mRNA degradation does not require ongoing translation, consistent with Roquin-mediated instability. We conclude that Roquin is a major effector of TfR1 mRNA abundance.

6.
Metallomics ; 12(12): 2186-2198, 2020 12 23.
Article in English | MEDLINE | ID: mdl-33325950

ABSTRACT

Iron regulatory proteins (IRPs) are iron-responsive RNA binding proteins that dictate changes in cellular iron metabolism in animal cells by controlling the fate of mRNAs containing iron responsive elements (IREs). IRPs have broader physiological roles as some targeted mRNAs encode proteins with functions beyond iron metabolism suggesting hierarchical regulation of IRP-targeted mRNAs. We observe that the translational regulation of IRP-targeted mRNAs encoding iron storage (L- and H-ferritins) and export (ferroportin) proteins have different set-points of iron responsiveness compared to that for the TCA cycle enzyme mitochondrial aconitase. The ferritins and ferroportin mRNA were largely translationally repressed in the liver of rats fed a normal diet whereas mitochondrial aconitase mRNA is primarily polysome bound. Consequently, acute iron overload increases polysome association of H- and L-ferritin and ferroportin mRNAs while mitochondrial aconitase mRNA showed little stimulation. Conversely, mitochondrial aconitase mRNA is most responsive in iron deficiency. These differences in regulation were associated with a faster off-rate of IRP1 for the IRE of mitochondrial aconitase in comparison to that of L-ferritin. Thus, hierarchical control of mRNA translation by IRPs involves selective control of cellular functions acting at different states of cellular iron status and that are critical for adaptations to iron deficiency or prevention of iron toxicity.


Subject(s)
Anemia, Iron-Deficiency/genetics , Iron Overload/genetics , Iron-Regulatory Proteins/genetics , RNA, Messenger/genetics , Animals , Cation Transport Proteins/genetics , Ferritins/genetics , Male , Mice , Protein Biosynthesis , Rats, Sprague-Dawley
7.
Nat Metab ; 1(7): 731-742, 2019 07.
Article in English | MEDLINE | ID: mdl-32259027

ABSTRACT

In response to signals associated with infection or tissue damage, macrophages undergo a series of dynamic phenotypic changes. Here we show that during the response to LPS and interferon-γ stimulation, metabolic reprogramming in macrophages is also highly dynamic. Specifically, the TCA cycle undergoes a two-stage remodeling: the early stage is characterized by a transient accumulation of intermediates including succinate and itaconate, while the late stage is marked by the subsidence of these metabolites. The metabolic transition into the late stage is largely driven by the inhibition of pyruvate dehydrogenase complex (PDHC) and oxoglutarate dehydrogenase complex (OGDC), which is controlled by the dynamic changes in lipoylation state of both PDHC and OGDC E2 subunits and phosphorylation of PDHC E1 subunit. This dynamic metabolic reprogramming results in a transient metabolic state that strongly favors HIF-1α stabilization during the early stage, which subsides by the late stage; consistently, HIF-1α levels follow this trend. This study elucidates a dynamic and mechanistic picture of metabolic reprogramming in LPS and interferon-γ stimulated macrophages, and provides insights into how changing metabolism can regulate the functional transitions in macrophages over a course of immune response.


Subject(s)
Interferon-gamma/pharmacology , Lipopolysaccharides/pharmacology , Macrophages/drug effects , Animals , Citric Acid Cycle , Cytokines/biosynthesis , Macrophages/metabolism , Mice , RAW 264.7 Cells
8.
J Biol Chem ; 292(38): 15976-15989, 2017 09 22.
Article in English | MEDLINE | ID: mdl-28768766

ABSTRACT

Iron-regulatory protein 1 (IRP1) belongs to a family of RNA-binding proteins that modulate metazoan iron metabolism. Multiple mechanisms are employed to control the action of IRP1 in dictating changes in the uptake and metabolic fate of iron. Inactivation of IRP1 RNA binding by iron primarily involves insertion of a [4Fe-4S] cluster by the cytosolic iron-sulfur cluster assembly (CIA) system, converting it into cytosolic aconitase (c-acon), but can also involve iron-mediated degradation of IRP1 by the E3 ligase FBXL5 that also targets IRP2. How CIA and FBXL5 collaborate to maintain cellular iron homeostasis through IRP1 and other pathways is poorly understood. Because impaired Fe-S cluster biogenesis associates with human disease, we determined the importance of FBXL5 for regulating IRP1 when CIA is impaired. Suppression of FBXL5 expression coupled with induction of an IRP1 mutant (IRP13C>3S) that cannot insert the Fe-S cluster, or along with knockdown of the CIA factors NUBP2 or FAM96A, reduced cell viability. Iron supplementation reversed this growth defect and was associated with FBXL5-dependent polyubiquitination of IRP1. Phosphorylation of IRP1 at Ser-138 increased when CIA was inhibited and was required for iron rescue. Impaired CIA activity, as noted by reduced c-acon activity, was associated with enhanced FBXL5 expression and a concomitant reduction in IRP1 and IRP2 protein level and RNA-binding activity. Conversely, expression of either IRP induced FBXL5 protein level, demonstrating a negative feedback loop limiting excessive accumulation of iron-response element RNA-binding activity, whose disruption reduces cell growth. We conclude that a regulatory circuit involving FBXL5 and CIA acts through both IRPs to control iron metabolism and promote optimal cell growth.


Subject(s)
F-Box Proteins/metabolism , Iron Regulatory Protein 1/metabolism , Iron/metabolism , Ubiquitin-Protein Ligase Complexes/metabolism , F-Box Proteins/genetics , Ferritins/metabolism , Gene Knockdown Techniques , HEK293 Cells , Humans , Iron Regulatory Protein 1/chemistry , Iron Regulatory Protein 2/metabolism , Phosphorylation , Proteasome Endopeptidase Complex/metabolism , Proteolysis , RNA/metabolism , Serine/metabolism , Sulfur/metabolism , Ubiquitin-Protein Ligase Complexes/deficiency , Ubiquitin-Protein Ligase Complexes/genetics , Ubiquitination
9.
ACS Chem Biol ; 11(1): 193-9, 2016 Jan 15.
Article in English | MEDLINE | ID: mdl-26535807

ABSTRACT

Collagen is the most abundant protein in animals. Its overproduction is associated with fibrosis and cancer metastasis. The stability of collagen relies on post-translational modifications, the most prevalent being the hydroxylation of collagen strands by collagen prolyl 4-hydroxylases (CP4Hs). Catalysis by CP4Hs enlists an iron cofactor to convert proline residues to 4-hydroxyproline residues, which are essential for the conformational stability of mature collagen. Ethyl 3,4-dihydroxybenzoate (EDHB) is commonly used as a "P4H" inhibitor in cells, but suffers from low potency, poor selectivity, and off-target effects that cause iron deficiency. Dicarboxylates of 2,2'-bipyridine are among the most potent known CP4H inhibitors but suffer from a high affinity for free iron. A screen of biheteroaryl compounds revealed that replacing one pyridyl group with a thiazole moiety retains potency and enhances selectivity. A diester of 2-(5-carboxythiazol-2-yl)pyridine-5-carboxylic acid is bioavailable to human cells and inhibits collagen biosynthesis at concentrations that neither cause general toxicity nor disrupt iron homeostasis. These data anoint a potent and selective probe for CP4H and a potential lead for the development of a new class of antifibrotic and antimetastatic agents.


Subject(s)
Carboxylic Acids/pharmacology , Procollagen-Proline Dioxygenase/antagonists & inhibitors , Antineoplastic Agents/chemistry , Antineoplastic Agents/pharmacology , Antineoplastic Agents/toxicity , Carboxylic Acids/chemistry , Carboxylic Acids/toxicity , Cell Line, Tumor , Cell Survival/drug effects , Enzyme Activation/drug effects , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Humans , Procollagen-Proline Dioxygenase/chemistry , Thiazoles/chemistry , Thiazoles/pharmacology
10.
Sci Signal ; 8(372): ra34, 2015 Apr 14.
Article in English | MEDLINE | ID: mdl-25872869

ABSTRACT

In multicellular organisms, the mechanisms by which diverse cell types acquire distinct amino acids and how cellular function adapts to their availability are fundamental questions in biology. We found that increased neutral essential amino acid (NEAA) uptake was a critical component of erythropoiesis. As red blood cells matured, expression of the amino acid transporter gene Lat3 increased, which increased NEAA import. Inadequate NEAA uptake by pharmacologic inhibition or RNAi-mediated knockdown of LAT3 triggered a specific reduction in hemoglobin production in zebrafish embryos and murine erythroid cells through the mTORC1 (mammalian target of rapamycin complex 1)/4E-BP (eukaryotic translation initiation factor 4E-binding protein) pathway. CRISPR-mediated deletion of members of the 4E-BP family in murine erythroid cells rendered them resistant to mTORC1 and LAT3 inhibition and restored hemoglobin production. These results identify a developmental role for LAT3 in red blood cells and demonstrate that mTORC1 serves as a homeostatic sensor that couples hemoglobin production at the translational level to sufficient uptake of NEAAs, particularly L-leucine.


Subject(s)
Carrier Proteins/metabolism , Eukaryotic Initiation Factors/metabolism , Hemoglobins/metabolism , Leucine/metabolism , Multiprotein Complexes/metabolism , Phosphoproteins/metabolism , TOR Serine-Threonine Kinases/metabolism , Adaptor Proteins, Signal Transducing , Amino Acid Transport Systems, Basic/genetics , Amino Acid Transport Systems, Basic/metabolism , Animals , Animals, Genetically Modified , CRISPR-Cas Systems , Carrier Proteins/genetics , Cell Cycle Proteins , Cell Line, Tumor , Cells, Cultured , Embryo, Mammalian/blood supply , Embryo, Mammalian/embryology , Embryo, Mammalian/metabolism , Embryo, Nonmammalian/embryology , Embryo, Nonmammalian/metabolism , Erythroid Cells/metabolism , Erythropoiesis/genetics , Eukaryotic Initiation Factors/genetics , Gene Expression Regulation, Developmental , HEK293 Cells , Hemoglobins/genetics , Humans , Immunoblotting , Mechanistic Target of Rapamycin Complex 1 , Mice , Microscopy, Confocal , Multiprotein Complexes/genetics , Phosphoproteins/genetics , RNA Interference , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction/genetics , TOR Serine-Threonine Kinases/genetics , Zebrafish
11.
J Biol Chem ; 290(7): 4432-46, 2015 Feb 13.
Article in English | MEDLINE | ID: mdl-25550162

ABSTRACT

Matriptase-2 (MT2) is a type II transmembrane serine protease that is predominantly expressed in hepatocytes. It suppresses the expression of hepatic hepcidin, an iron regulatory hormone, by cleaving membrane hemojuvelin into an inactive form. Hemojuvelin is a bone morphogenetic protein (BMP) co-receptor. Here, we report that MT2 is up-regulated under iron deprivation. In HepG2 cells stably expressing the coding sequence of the MT2 gene, TMPRSS6, incubation with apo-transferrin or the membrane-impermeable iron chelator, deferoxamine mesylate salt, was able to increase MT2 levels. This increase did not result from the inhibition of MT2 shedding from the cells. Rather, studies using a membrane-permeable iron chelator, salicylaldehyde isonicotinoyl hydrazone, revealed that depletion of cellular iron was able to decrease the degradation of MT2 independently of internalization. We found that lack of the putative endocytosis motif in its cytoplasmic domain largely abolished the sensitivity of MT2 to iron depletion. Neither acute nor chronic iron deficiency was able to alter the association of Tmprss6 mRNA with polyribosomes in the liver of rats indicating a lack of translational regulation by low iron levels. Studies in mice showed that Tmprss6 mRNA was not regulated by iron nor the BMP-mediated signaling with no evident correlation with either Bmp6 mRNA or Id1 mRNA, a target of BMP signaling. These results suggest that regulation of MT2 occurs at the level of protein degradation rather than by changes in the rate of internalization and translational or transcriptional mechanisms and that the cytoplasmic domain of MT2 is necessary for its regulation.


Subject(s)
Gene Expression Regulation , Iron Deficiencies , Membrane Proteins/chemistry , Membrane Proteins/physiology , Serine Endopeptidases/chemistry , Serine Endopeptidases/physiology , Animals , Biotinylation , Blotting, Western , Bone Morphogenetic Proteins/genetics , Bone Morphogenetic Proteins/metabolism , Cells, Cultured , GPI-Linked Proteins , Hemochromatosis Protein , Hep G2 Cells , Hepatocytes/cytology , Hepatocytes/metabolism , Homeostasis , Humans , Immunoenzyme Techniques , Immunoprecipitation , Liver/cytology , Liver/metabolism , Male , Membrane Proteins/genetics , Membrane Proteins/metabolism , Mice , Mice, Knockout , RNA, Messenger/genetics , Rats , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction
12.
J Biol Chem ; 289(11): 7835-43, 2014 Mar 14.
Article in English | MEDLINE | ID: mdl-24509859

ABSTRACT

Mitochondrial iron is essential for the biosynthesis of heme and iron-sulfur ([Fe-S]) clusters in mammalian cells. In developing erythrocytes, iron is imported into the mitochondria by MFRN1 (mitoferrin-1, SLC25A37). Although loss of MFRN1 in zebrafish and mice leads to profound anemia, mutant animals showed no overt signs of porphyria, suggesting that mitochondrial iron deficiency does not result in an accumulation of protoporphyrins. Here, we developed a gene trap model to provide in vitro and in vivo evidence that iron regulatory protein-1 (IRP1) inhibits protoporphyrin accumulation. Mfrn1(+/gt);Irp1(-/-) erythroid cells exhibit a significant increase in protoporphyrin levels. IRP1 attenuates protoporphyrin biosynthesis by binding to the 5'-iron response element (IRE) of alas2 mRNA, inhibiting its translation. Ectopic expression of alas2 harboring a mutant IRE, preventing IRP1 binding, in Mfrn1(gt/gt) cells mimics Irp1 deficiency. Together, our data support a model whereby impaired mitochondrial [Fe-S] cluster biogenesis in Mfrn1(gt/gt) cells results in elevated IRP1 RNA-binding that attenuates ALAS2 mRNA translation and protoporphyrin accumulation.


Subject(s)
5-Aminolevulinate Synthetase/metabolism , Gene Expression Regulation , Iron Regulatory Protein 1/metabolism , Membrane Transport Proteins/metabolism , Porphyrias/metabolism , Animals , Blastocyst/cytology , Cell Differentiation , Cell Line, Tumor , Female , Genotype , HEK293 Cells , Heme/chemistry , Humans , Iron/chemistry , Iron-Sulfur Proteins/metabolism , Male , Mice , Mice, Inbred C57BL , Protein Biosynthesis , Protoporphyrins/metabolism , Zebrafish
13.
Cell Metab ; 17(2): 282-90, 2013 Feb 05.
Article in English | MEDLINE | ID: mdl-23395174

ABSTRACT

Red blood cell production is a finely tuned process that requires coordinated oxygen- and iron-dependent regulation of cell differentiation and iron metabolism. Here, we show that translational regulation of hypoxia-inducible factor 2α (HIF-2α) synthesis by iron regulatory protein 1 (IRP1) is critical for controlling erythrocyte number. IRP1-null (Irp1(-/-)) mice display a marked transient polycythemia. HIF-2α messenger RNA (mRNA) is derepressed in kidneys of Irp1(-/-) mice but not in kidneys of Irp2(-/-) mice, leading to increased renal erythropoietin (Epo) mRNA and inappropriately elevated serum Epo levels. Expression of the iron transport genes DCytb, Dmt1, and ferroportin, as well as other HIF-2α targets, is enhanced in Irp1(-/-) duodenum. Analysis of mRNA translation state in the liver revealed IRP1-dependent dysregulation of HIF-2α mRNA translation, whereas IRP2 deficiency derepressed translation of all other known 5' iron response element (IRE)-containing mRNAs expressed in the liver. These results uncover separable physiological roles of each IRP and identify IRP1 as a therapeutic target for manipulating HIF-2α action in hematologic, oncologic, and other disorders.


Subject(s)
Basic Helix-Loop-Helix Transcription Factors/metabolism , Erythropoiesis , Iron Regulatory Protein 1/metabolism , Iron/metabolism , Oxygen/metabolism , Signal Transduction , Absorption , Animals , Basic Helix-Loop-Helix Transcription Factors/genetics , Duodenum/metabolism , Duodenum/pathology , Erythroid Cells/metabolism , Erythroid Precursor Cells/metabolism , Erythropoietin/blood , Gene Expression Regulation , Hematopoiesis, Extramedullary , Iron Regulatory Protein 1/deficiency , Mice , Polycythemia/blood , Polycythemia/pathology , Protein Biosynthesis , RNA, Messenger/genetics , RNA, Messenger/metabolism , Spleen/metabolism
14.
J Biol Chem ; 288(1): 552-60, 2013 Jan 04.
Article in English | MEDLINE | ID: mdl-23135277

ABSTRACT

Maintenance of cellular iron homeostasis requires post-transcriptional regulation of iron metabolism genes by iron regulatory protein 2 (IRP2). The hemerythrin-like domain of F-box and leucine-rich repeat protein 5 (FBXL5), an E3 ubiquitin ligase subunit, senses iron and oxygen availability and facilitates IRP2 degradation in iron replete cells. Disruption of the ubiquitously expressed murine Fbxl5 gene results in a failure to sense increased cellular iron availability, accompanied by constitutive IRP2 accumulation and misexpression of IRP2 target genes. FBXL5-null mice die during embryogenesis, although viability is restored by simultaneous deletion of the IRP2, but not IRP1, gene. Mice containing a single functional Fbxl5 allele behave like their wild type littermates when fed an iron-sufficient diet. However, unlike wild type mice that manifest decreased hematocrit and hemoglobin levels when fed a low-iron diet, Fbxl5 heterozygotes maintain normal hematologic values due to increased iron absorption. The responsiveness of IRP2 to low iron is specifically enhanced in the duodena of the heterozygotes and is accompanied by increased expression of the divalent metal transporter-1. These results confirm the role of FBXL5 in the in vivo maintenance of cellular and systemic iron homeostasis and reveal a privileged role for the intestine in their regulation by virtue of its unique FBXL5 iron sensitivity.


Subject(s)
F-Box Proteins/metabolism , Gene Expression Regulation, Developmental , Ubiquitin-Protein Ligases/chemistry , Absorption , Alleles , Animals , Cell Survival , Crosses, Genetic , Heterozygote , Homeostasis , Humans , Iron/chemistry , Iron Regulatory Protein 1/metabolism , Iron Regulatory Protein 2/metabolism , Mice , Models, Genetic , Protein Binding , Ubiquitin-Protein Ligase Complexes , Ubiquitin-Protein Ligases/metabolism
15.
Biochim Biophys Acta ; 1823(9): 1468-83, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22610083

ABSTRACT

Cellular iron homeostasis is maintained by iron regulatory proteins 1 and 2 (IRP1 and IRP2). IRPs bind to iron-responsive elements (IREs) located in the untranslated regions of mRNAs encoding protein involved in iron uptake, storage, utilization and export. Over the past decade, significant progress has been made in understanding how IRPs are regulated by iron-dependent and iron-independent mechanisms and the pathological consequences of IRP2 deficiency in mice. The identification of novel IREs involved in diverse cellular pathways has revealed that the IRP-IRE network extends to processes other than iron homeostasis. A mechanistic understanding of IRP regulation will likely yield important insights into the basis of disorders of iron metabolism. This article is part of a Special Issue entitled: Cell Biology of Metals.


Subject(s)
Iron Regulatory Protein 1/metabolism , Iron Regulatory Protein 2/deficiency , Iron/metabolism , Response Elements/genetics , Animals , Ferritins/genetics , Ferritins/metabolism , Gene Expression Regulation , Homeostasis/physiology , Humans , Ion Transport , Iron Regulatory Protein 1/genetics , Iron Regulatory Protein 2/genetics , Mammals , Mice , Mice, Knockout , Receptors, Transferrin/genetics , Receptors, Transferrin/metabolism , Untranslated Regions/genetics
16.
Blood ; 117(5): 1687-99, 2011 Feb 03.
Article in English | MEDLINE | ID: mdl-21115976

ABSTRACT

Recent studies demonstrate a pivotal role for bone morphogenic protein-6 (BMP6) and matriptase-2, a protein encoded by the TMPRSS6 gene, in the induction and suppression of hepatic hepcidin expression, respectively. We examined their expression profiles in the liver and showed a predominant localization of BMP6 mRNA in nonparenchymal cells and exclusive expression of TMPRSS6 mRNA in hepatocytes. In rats fed an iron-deficient (ID) diet for 24 hours, the rapid decrease of transferrin saturation from 71% to 24% (control vs ID diet) was associated with a 100-fold decrease in hepcidin mRNA compared with the corresponding controls. These results indicated a close correlation of low transferrin saturation with decreased hepcidin mRNA. The lower phosphorylated Smad1/5/8 detected in the ID rat livers suggests that the suppressed hepcidin expression results from the inhibition of BMP signaling. Quantitative real-time reverse transcription polymerase chain reaction analysis revealed no significant change in either BMP6 or TMPRSS6 mRNA in the liver. However, an increase in matriptase-2 protein in the liver from ID rats was detected, suggesting that suppression of hepcidin expression in response to acute iron deprivation is mediated by an increase in matriptase-2 protein levels.


Subject(s)
Antimicrobial Cationic Peptides/metabolism , Bone Morphogenetic Proteins/metabolism , Hepatocytes/metabolism , Iron Deficiencies , Liver/metabolism , Membrane Proteins/metabolism , Serine Endopeptidases/metabolism , Animals , Antimicrobial Cationic Peptides/antagonists & inhibitors , Bone Morphogenetic Proteins/genetics , Hepcidins , Immunoblotting , In Situ Hybridization , Iron, Dietary/administration & dosage , Liver/cytology , Male , Membrane Proteins/genetics , RNA, Messenger/genetics , Rats , Rats, Sprague-Dawley , Reverse Transcriptase Polymerase Chain Reaction , Serine Endopeptidases/genetics , Transferrin/metabolism
17.
RNA ; 16(1): 154-69, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19939970

ABSTRACT

Iron regulatory proteins (IRPs) are iron-regulated RNA binding proteins that, along with iron-responsive elements (IREs), control the translation of a diverse set of mRNA with 5' IRE. Dysregulation of IRP action causes disease with etiology that may reflect differential control of IRE-containing mRNA. IREs are defined by a conserved stem-loop structure including a midstem bulge at C8 and a terminal CAGUGH sequence that forms an AGU pseudo-triloop and N19 bulge. C8 and the pseudo-triloop nucleotides make the majority of the 22 identified bonds with IRP1. We show that IRP1 binds 5' IREs in a hierarchy extending over a ninefold range of affinities that encompasses changes in IRE binding affinity observed with human L-ferritin IRE mutants. The limits of this IRE binding hierarchy are predicted to arise due to small differences in binding energy (e.g., equivalent to one H-bond). We demonstrate that multiple regions of the IRE stem not predicted to contact IRP1 help establish the binding hierarchy with the sequence and structure of the C8 region displaying a major role. In contrast, base-pairing and stacking in the upper stem region proximal to the terminal loop had a minor role. Unexpectedly, an N20 bulge compensated for the lack of an N19 bulge, suggesting the existence of novel IREs. Taken together, we suggest that a regulatory binding hierarchy is established through the impact of the IRE stem on the strength, not the number, of bonds between C8 or pseudo-triloop nucleotides and IRP1 or through their impact on an induced fit mechanism of binding.


Subject(s)
Iron-Regulatory Proteins/metabolism , Nucleic Acid Conformation , Response Elements/genetics , Response Elements/physiology , Animals , Apoferritins/metabolism , Base Sequence/physiology , Humans , Iron Regulatory Protein 1/metabolism , Metabolic Networks and Pathways/genetics , Metabolic Networks and Pathways/physiology , Models, Molecular , Molecular Sequence Data , Phylogeny , Protein Binding , RNA-Binding Proteins/metabolism , Rabbits , Saccharomyces cerevisiae , Substrate Specificity/genetics
18.
J Biol Chem ; 284(19): 12701-9, 2009 May 08.
Article in English | MEDLINE | ID: mdl-19269970

ABSTRACT

Iron-sulfur cluster-dependent interconversion of iron regulatory protein 1 (IRP1) between its RNA binding and cytosolic aconitase (c-acon) forms controls vertebrate iron homeostasis. Cluster removal from c-acon is thought to include oxidative demetallation as a required step, but little else is understood about the process of conversion to IRP1. In comparison with c-acon(WT), Ser(138) phosphomimetic mutants of c-acon contain an unstable [4Fe-4S] cluster and were used as tools to further define the pathway(s) of iron-sulfur cluster disassembly. Under anaerobic conditions cluster insertion into purified IRP1(S138E) and cluster loss on treatment with NO regulated aconitase and RNA binding activity over a similar range as observed for IRP1(WT). However, activation of RNA binding of c-acon(S138E) was an order of magnitude more sensitive to NO than for c-acon(WT). Consistent with this, an altered set point between RNA-binding and aconitase forms was observed for IRP1(S138E) when expressed in HEK cells. Active c-acon(S138E) could only accumulate under hypoxic conditions, suggesting enhanced cluster disassembly in normoxia. Cluster disassembly mechanisms were further probed by determining the impact of iron chelation on acon activity. Unexpectedly EDTA rapidly inhibited c-acon(S138E) activity without affecting c-acon(WT). Additional chelator experiments suggested that cluster loss can be initiated in c-acon(S138E) through a spontaneous nonoxidative demetallation process. Taken together, our results support a model wherein Ser(138) phosphorylation sensitizes IRP1/c-acon to decreased iron availability by allowing the [4Fe-4S](2+) cluster to cycle with [3Fe-4S](0) in the absence of cluster perturbants, indicating that regulation can be initiated merely by changes in iron availability.


Subject(s)
Aconitate Hydratase/metabolism , Iron Regulatory Protein 1/metabolism , Iron-Sulfur Proteins/metabolism , Iron/metabolism , Serine/metabolism , Sulfur/metabolism , Cytosol/enzymology , Electron Spin Resonance Spectroscopy , Humans , Hypoxia , Iron Chelating Agents , Iron Regulatory Protein 1/genetics , Iron-Sulfur Proteins/genetics , Kidney/cytology , Kidney/metabolism , Mutagenesis, Site-Directed , Mutation , Nitric Oxide/metabolism , Phosphorylation , RNA/metabolism
19.
J Biol Chem ; 283(40): 26956-64, 2008 Oct 03.
Article in English | MEDLINE | ID: mdl-18676996

ABSTRACT

Hemoglobin production during erythropoiesis is mechanistically coupled to the acquisition and metabolism of iron. We discovered that iron regulates the expression of alpha-hemoglobin-stabilizing protein (AHSP), a molecular chaperone that binds and stabilizes free alpha-globin during hemoglobin synthesis. In primates, the 3'-untranslated region (UTR) of AHSP mRNA contains a nucleotide sequence resembling iron responsive elements (IREs), stem-loop structures that regulate gene expression post-transcriptionally by binding iron regulatory proteins (IRPs). The AHSP IRE-like stem-loop deviates from classical consensus sequences and binds IRPs poorly in electrophoretic mobility shift assays. However, in cytoplasmic extracts, AHSP mRNA co-immunoprecipitates with IRPs in a fashion that is dependent on the stem-loop structure and inhibited by iron. Moreover, this interaction enhances AHSP mRNA stability in erythroid and heterologous cells. Our findings demonstrate that IRPs can regulate mRNA expression through non-canonical IREs and extend the repertoire of known iron-regulated genes. In addition, we illustrate a new mechanism through which hemoglobin may be modulated according to iron status.


Subject(s)
3' Untranslated Regions/metabolism , Blood Proteins/metabolism , Erythropoiesis/physiology , Iron/metabolism , Molecular Chaperones/metabolism , RNA Stability/physiology , 3' Untranslated Regions/genetics , Blood Proteins/genetics , HeLa Cells , Hemoglobins/biosynthesis , Hemoglobins/genetics , Humans , K562 Cells , Molecular Chaperones/genetics , Nucleic Acid Conformation
20.
Mol Cell Biol ; 28(17): 5517-28, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18573874

ABSTRACT

The maturation of cytosolic iron-sulfur (Fe/S) proteins in mammalian cells requires components of the mitochondrial iron-sulfur cluster assembly and export machineries. Little is known about the cytosolic components that may facilitate the assembly process. Here, we identified the cytosolic soluble P-loop NTPase termed huNbp35 (also known as Nubp1) as an Fe/S protein, and we defined its role in the maturation of Fe/S proteins in HeLa cells. Depletion of huNbp35 by RNA interference decreased cell growth considerably, indicating its essential function. The deficiency in huNbp35 was associated with an impaired maturation of the cytosolic Fe/S proteins glutamine phosphoribosylpyrophosphate amidotransferase and iron regulatory protein 1 (IRP1), while mitochondrial Fe/S proteins remained intact. Consequently, huNbp35 is specifically involved in the formation of extramitochondrial Fe/S proteins. The impaired maturation of IRP1 upon huNbp35 depletion had profound consequences for cellular iron metabolism, leading to decreased cellular H-ferritin, increased transferrin receptor levels, and higher transferrin uptake. These properties clearly distinguished huNbp35 from its yeast counterpart Nbp35, which is essential for cytosolic-nuclear Fe/S protein assembly but plays no role in iron regulation. huNbp35 formed a complex with its close homologue huCfd1 (also known as Nubp2) in vivo, suggesting the existence of a heteromeric P-loop NTPase complex that is required for both cytosolic Fe/S protein assembly and cellular iron homeostasis.


Subject(s)
Adenosine Triphosphatases/metabolism , Cytosol/metabolism , Homeostasis , Iron-Sulfur Proteins/metabolism , Iron/metabolism , Aconitate Hydratase/metabolism , Adenosine Triphosphatases/chemistry , Adenosine Triphosphatases/isolation & purification , Amino Acid Sequence , Animals , Cell Proliferation , Cytosol/enzymology , Ferritins/metabolism , Glycerol-3-Phosphate O-Acyltransferase/metabolism , HeLa Cells , Humans , Iron Regulatory Protein 1/metabolism , Mice , Molecular Sequence Data , Protein Binding , Protein Biosynthesis , RNA Interference , Receptors, Transferrin/biosynthesis , Response Elements
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