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1.
Article in English | MEDLINE | ID: mdl-27525193

ABSTRACT

BACKGROUND: School-based campaigns to improve student health have demonstrated short-term success across various health topics. However, evidence of the effectiveness of programs in promoting healthy beliefs and behaviors is limited. We hypothesized that educational curricula teaching the science behind health promotion would increase student knowledge, beliefs and adherence to healthy behaviors, in this case related to influenza. METHODS: Integrated Science Education Outreach is a successful education intervention in Rochester, Minnesota public schools that has demonstrated improvements in student learning. Within this program, we designed novel curricula and assessments to determine if gains in knowledge extended to influenza prevention. Further, we coupled InSciEd Out programming with a clinical intervention, Influenza Prevention Prescription Education (IPPE), to compare students' attitudes, intentions and healthy behaviors utilizing surveys and hand hygiene monitoring equipment. RESULTS: 95 students participated in (IPPE) in the intervention school. Talking drawings captured improvement in influenza prevention understanding related to hand washing [pre n=17(43%); post n=30(77%)] and vaccination [pre n=2(5%); post n=15(38%)]. Findings from 1024 surveys from 566 students revealed strong baseline understanding and attitudes related to hand washing and cough etiquette (74% or greater positive responses). Automated hand hygiene monitoring in school bathrooms and classrooms estimated compliance for both soap (overall median 63%, IQR 38% to 100%) and hand sanitizer use (0.04 to 0.24 uses per student per day) but did not show significant pre/ post IPPE differences. CONCLUSIONS: Student understanding of principles of influenza prevention was reasonably high. Even with this baseline, InSciEd Out and IPPE improved students' unprompted knowledge of behaviors to prevent influenza, as reflected by talking drawings. This novel metric may be more sensitive in capturing knowledge among students than traditional assessment methods. However, IPPE did not produce further significant differences in student attitudes and behaviors regarding the flu.

2.
Methods Cell Biol ; 135: 149-70, 2016.
Article in English | MEDLINE | ID: mdl-27443924

ABSTRACT

Zebrafish (Danio rerio) is a unique model organism at the functional intersection between a high fecundity and conserved vertebrate physiology while being amenable to a multitude of genome editing techniques. The genome engineering field has experienced an unprecedented rate of growth in the recent years since the introduction of designer endonucleases, such as zinc finger nucleases, transcription activator-like effector nucleases, and clustered regularly interspaced short palindromic repeats-Cas9 systems. With the ever-evolving toolset available to the scientific community, the important question one should ask is not simply how to make a mutant line, but rather how best to do so. For this purpose, understanding the toolset is just one end of the equation; understanding how DNA is repaired once double-strand breaks are induced by designer endonucleases, as well as understanding proper fish handling and line maintenance techniques, are also essential to rapidly edit the zebrafish genome. This chapter is outlined to provide a bird's-eye view on each of these three components. The goal of this chapter is to facilitate the adoption of the zebrafish as a model to study human genetic disease and to rapidly analyze the function of the vertebrate genome.


Subject(s)
CRISPR-Cas Systems/genetics , Gene Editing/methods , Genetic Engineering/methods , Animals , DNA Breaks, Double-Stranded , Zebrafish/genetics
3.
Blood Cancer J ; 4: e210, 2014 May 09.
Article in English | MEDLINE | ID: mdl-24813078

ABSTRACT

Multiple myeloma (MM) is a clonal plasma cell malignancy that is initiated by a number of mutations and the process of disease progression is characterized by further acquisition of mutations. The identification and functional characterization of these myelomagenic mutations is necessary to better understand the underlying pathogenic mechanisms in this disease. Recent advancements in next-generation sequencing have made the identification of most of these mutations a reality. However, the functional characterization of these mutations has been hampered by the lack of proper and efficient tools to dissect these mutations. Here we explored the possible utility of transcription activator-like effector nuclease (TALEN) genome engineering technology to tailoring the genome of MM cells. To test this possibility, we targeted the HPRT1 gene and found that TALENs are a very robust and efficient genome-editing tool in MM cells. Using cotransfected green fluorescent protein as an enrichment marker, single-cell subclones with desirable TALEN modifications in the HPRT1 gene were obtained in as little as 3-4 weeks of time. We believe that TALENs will greatly facilitate the functional study of somatic mutations in MM as well as other cancers.


Subject(s)
Deoxyribonucleases/genetics , Multiple Myeloma/enzymology , Multiple Myeloma/genetics , Mutation , Base Sequence , Deoxyribonucleases/metabolism , Female , Gene Knockout Techniques/methods , Gene Targeting , Genetic Engineering , Humans , Hypoxanthine Phosphoribosyltransferase/genetics , Hypoxanthine Phosphoribosyltransferase/metabolism , Male , Molecular Sequence Data , Tumor Cells, Cultured
4.
Curr Opin Mol Ther ; 3(3): 224-8, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11497344

ABSTRACT

Unconventional antisense technology has entered the mainstream for both therapeutic and functional genomics applications in a variety of biological settings. Further development of this approach has been hampered by the high cost and limited information obtained with standard bioassays and animal models. The embryo of the zebrafish Danio rerio offers both biologists and technologists a new strategy that rapidly garners efficacy, toxicity and specificity data in an in vivo setting. This system has been used to optimize current antisense targeting methods, and it provides an ideal initial assay system for the development of new chemistries or other new gene targeting approaches.


Subject(s)
Gene Targeting/methods , Genomics , Oligonucleotides, Antisense/genetics , Thionucleotides/genetics , Zebrafish/genetics , Animals , Genetic Therapy , Humans , Microinjections , Morpholines/pharmacology , Oligonucleotides, Antisense/metabolism , Oligonucleotides, Antisense/pharmacology , Oligonucleotides, Antisense/therapeutic use , Thionucleotides/metabolism , Thionucleotides/pharmacology , Zebrafish/embryology
11.
Biotechniques ; 31(1): 66-70, 72, 2001 Jul.
Article in English | MEDLINE | ID: mdl-11464522

ABSTRACT

The zebrafish embryo is especially valuable for cell biological studies because of its optical clarity. In this system, use of an in vivo fluorescent reporter has been limited to green fluorescent protein (GFP). We have examined other fluorescent proteins alone or in conjunction with GFP to investigate their efficacy as markers for multi-labeling purposes in live zebrafish. By injecting plasmid DNA containing fluorescent protein expression cassettes, we generated single-, double-, or triple-labeled embryos using GFP, blue fluorescent protein (BFP, a color-shifted GFP), and red fluorescent protein (DsRed, a wild-type protein structurally related to GFP). Fluorescent imaging demonstrates that GFP and DsRed are highly stable proteins, exhibiting no detectable photoinstability, and a high signal-to-noise ratio. BFP demonstrated detectable photoinstability and a lower signal-to-noise ratio than either GFP or DsRed. Using appropriate filter sets, these fluorescent proteins can be independently detected even when simultaneously expressed in the same cells. Multiple labels in individual zebrafish cells open the door to a number of biological avenues of investigation, including multiple, independent tags of transgenic fish lines, lineage studies of wild-type proteins expressed using polycistronic messages, and the detection of protein-protein interactions at the subcellular level using fluorescent protein fusions.


Subject(s)
Indicators and Reagents/metabolism , Luminescent Proteins/genetics , Microscopy, Fluorescence/methods , Animals , Animals, Genetically Modified , Color , Embryo, Nonmammalian , Gene Expression Regulation, Developmental , Green Fluorescent Proteins , Zebrafish , Red Fluorescent Protein
12.
Mech Dev ; 103(1-2): 133-6, 2001 May.
Article in English | MEDLINE | ID: mdl-11335120

ABSTRACT

We have isolated a new Wnt receptor frizzled family member from Xenopus laevis, Xenopus frizzled-5 (Xfz5), a likely ortholog of human frizzled-5. Based on Northern and whole-mount in situ hybridization data, Xfz5 is first detected at the late neurula stage in retinal primordia. Throughout the tailbud stage Xfz5 is expressed exclusively in the neural retina within the optic vesicles. During tadpole stage Xfz5 expression becomes restricted to the ciliary marginal zone. This highly restrictive expression pattern makes Xfz5 an excellent marker for neural retinal tissue.


Subject(s)
Eye Proteins/biosynthesis , Eye/embryology , Retina/embryology , Xenopus/metabolism , Amino Acid Sequence , Animals , Blotting, Northern , Frizzled Receptors , In Situ Hybridization , Molecular Sequence Data , Phylogeny , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Time Factors , Tissue Distribution , Xenopus Proteins
13.
Nature ; 410(6827): 479-83, 2001 Mar 22.
Article in English | MEDLINE | ID: mdl-11260716

ABSTRACT

Bone morphogenetic protein (BMP) signalling regulates embryonic dorsal-ventral cell fate decisions in flies, frogs and fish. BMP activity is controlled by several secreted factors including the antagonists chordin and short gastrulation (SOG). Here we show that a second secreted protein, Twisted gastrulation (Tsg), enhances the antagonistic activity of Sog/chordin. In Drosophila, visualization of BMP signalling using anti-phospho-Smad staining shows that the tsg and sog loss-of-function phenotypes are very similar. In S2 cells and imaginal discs, TSG and SOG together make a more effective inhibitor of BMP signalling than either of them alone. Blocking Tsg function in zebrafish with morpholino oligonucleotides causes ventralization similar to that produced by chordin mutants. Co-injection of sub-inhibitory levels of morpholines directed against both Tsg and chordin synergistically enhances the penetrance of the ventralized phenotype. We show that Tsgs from different species are functionally equivalent, and conclude that Tsg is a conserved protein that functions with SOG/chordin to antagonize BMP signalling.


Subject(s)
Bone Morphogenetic Proteins/antagonists & inhibitors , Drosophila Proteins , Gastrula/metabolism , Glycoproteins , Intercellular Signaling Peptides and Proteins , Proteins/metabolism , Proteins/physiology , Signal Transduction , Animals , Bone Morphogenetic Proteins/metabolism , Chromosome Mapping , Cloning, Molecular , Conserved Sequence , Drosophila , Gene Expression , Humans , Insect Proteins/genetics , Insect Proteins/metabolism , Mice , Molecular Sequence Data , Protein Binding , Proteins/chemistry , Proteins/genetics , Recombinant Fusion Proteins/metabolism , Xenopus , Zebrafish
14.
Yeast ; 17(4): 294-301, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11119306

ABSTRACT

Angiogenesis is a fundamental vertebrate developmental process that requires signalling by the secreted protein vascular endothelial growth factor-A (VEGF-A). VEGF-A functions in the development of embryonic structures, during tissue remodelling and for the growth of tumour-induced vasculature. The study of the role of VEGF-A during normal development has been significantly complicated by the dominant, haplo-insufficient nature of VEGF-A-targeted mutations in mice. We have used morpholino-based targeted gene knock-down technology to generate a zebrafish VEGF-A morphant loss of function model. Zebrafish VEGF-A morphant embryos develop with an enlarged pericardium and with major blood vessel deficiencies. Morphological assessment at 2 days of development indicates a nearly complete absence of both axial and intersegmental vasculature, with no or reduced numbers of circulating red blood cells. Molecular analysis using the endothelial markers fli-1 and flk-1 at 1 day of development demonstrates a fundamental distinction between VEGF-A requirements for axial and intersegmental vascular structure specification. VEGF-A is not required for the initial establishment of axial vasculature patterning, whereas all development of intersegmental vasculature is dependent on VEGF-A signalling. The zebrafish thus serves as a quality model for the study of conserved vertebrate angiogenesis processes during embryonic development.


Subject(s)
Blood Vessels/embryology , Endothelial Growth Factors/genetics , Endothelial Growth Factors/physiology , Gene Targeting , Neovascularization, Physiologic , Proto-Oncogene Proteins , Zebrafish/embryology , Zebrafish/genetics , Animals , Body Patterning , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Embryonic Development , Gene Expression , Morpholines , Mutation , Oligonucleotides, Antisense , Phenotype , Proto-Oncogene Protein c-fli-1 , Receptor Protein-Tyrosine Kinases/genetics , Receptor Protein-Tyrosine Kinases/metabolism , Receptors, Growth Factor/genetics , Receptors, Growth Factor/metabolism , Receptors, Vascular Endothelial Growth Factor , Signal Transduction , Trans-Activators/genetics , Trans-Activators/metabolism , Vascular Endothelial Growth Factor A
15.
Yeast ; 17(4): 302-306, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11119307

ABSTRACT

The vertebrate genome contains a predicted 50 000-100 000 genes, many of unknown function. The recent development of morpholino-based gene knock-down technology in zebrafish has opened the door to the genome-wide assignment of function based on sequence in a model vertebrate. This review describes technical aspects of morpholino use for functional genomics applications, including the potential for multigene targeting and known methodological limitations. The result of successful gene inactivation by this agent is proposed to yield embryos with a 'morphant' phenotypic designation. The establishment of a morphant database opens the door to true functional genomics using the vertebrate, Danio rerio.


Subject(s)
Gene Targeting , Genomics , Vertebrates/genetics , Animals , Databases, Factual , Morpholines , Oligonucleotides, Antisense , Phenotype , Zebrafish/genetics
16.
Nat Genet ; 26(2): 216-20, 2000 Oct.
Article in English | MEDLINE | ID: mdl-11017081

ABSTRACT

The sequencing of the zebrafish genome should be completed by the end of 2002. Direct assignment of function on the basis of this information would be facilitated by the development of a rapid, targeted 'knockdown' technology in this model vertebrate. We show here that antisense, morpholino-modified oligonucleotides (morpholinos) are effective and specific translational inhibitors in zebrafish. We generated phenocopies of mutations of the genes no tail (ref. 2), chordin (ref. 3), one-eyed-pinhead (ref. 4), nacre (ref. 5) and sparse (ref. 6), removing gene function from maternal through post-segmentation and organogenesis developmental stages. We blocked expression from a ubiquitous green fluorescent protein (GFP) transgene, showing that, unlike tissue-restricted limitations found with RNA-based interference in the nematode, all zebrafish cells readily respond to this technique. We also developed also morpholino-based zebrafish models of human disease. Morpholinos targeted to the uroporphyrinogen decarboxylase gene result in embryos with hepatoerythropoietic porphyria. We also used morpholinos for the determination of new gene functions. We showed that embryos with reduced sonic hedgehog (ref. 9) signalling and reduced tiggy-winkle hedgehog (ref. 10) function exhibit partial cyclopia and other specific midline abnormalities, providing a zebrafish genetic model for the common human disorder holoprosencephaly. Conserved vertebrate processes and diseases are now amenable to a systematic, in vivo, reverse-genetic paradigm using zebrafish embryos.


Subject(s)
Genome , Oligodeoxyribonucleotides, Antisense/pharmacology , Trans-Activators , Uroporphyrinogen Decarboxylase/genetics , Zebrafish/genetics , Animals , Animals, Genetically Modified , Base Sequence , Disease Models, Animal , Female , Green Fluorescent Proteins , Hedgehog Proteins , Humans , Luminescent Proteins/genetics , Morphogenesis , Morpholines , Porphyria, Hepatoerythropoietic/genetics , Proteins/genetics , Signal Transduction , Uroporphyrinogen Decarboxylase/deficiency , Zebrafish/embryology , Zebrafish Proteins , Zygote
17.
Development ; 127(9): 1981-90, 2000 May.
Article in English | MEDLINE | ID: mdl-10751186

ABSTRACT

We have isolated one member of the frizzled family of wnt receptors from Xenopus (Xfz7) to study the role of cell-cell communication in the establishment of the vertebrate axis. We demonstrate that this maternally encoded protein specifically synergizes with wnt proteins in ectopic axis induction. Embryos derived from oocytes depleted of maternal Xfz7 RNA by antisense oligonucleotide injection are deficient in dorsoanterior structures. Xfz7-depleted embryos are deficient in dorsal but not ventral mesoderm due to the reduced expression of the wnt target genes siamois, Xnr3 and goosecoid. These signaling defects can be restored by the addition of beta-catenin but not Xwnt8b. Xfz7 thus functions upstream of the known GSK-3/axin/beta-catenin intracellular signaling complex in vertebrate dorsoventral mesoderm specification.


Subject(s)
Cytoskeletal Proteins/genetics , Proto-Oncogene Proteins/metabolism , Receptors, Cell Surface/genetics , Receptors, G-Protein-Coupled , Repressor Proteins , Trans-Activators , Transcription Factors , Xenopus Proteins , Xenopus/embryology , Zebrafish Proteins , Amino Acid Sequence , Animals , Body Patterning , Evolution, Molecular , Gene Expression Regulation, Developmental , Goosecoid Protein , Homeodomain Proteins/genetics , Mesoderm/metabolism , Microinjections , Molecular Sequence Data , Oocytes/metabolism , RNA, Antisense/pharmacology , RNA, Messenger/metabolism , Receptors, Cell Surface/metabolism , Signal Transduction , Transforming Growth Factor beta/genetics , Wnt Proteins , beta Catenin
18.
Mech Dev ; 92(2): 311-4, 2000 Apr.
Article in English | MEDLINE | ID: mdl-10727872

ABSTRACT

Members of the frizzled gene family encode seven-pass transmembrane proteins that function in the interpretation and reception of Wnt-mediated cell-cell communication events. To investigate frizzled function in early zebrafish development, we isolated the maternally contributed frizzled 10 (fz10) gene and localized it to linkage group 8 using radiation hybrid mapping. The cloned zebrafish fz10 is closely related to the fz10 group from other organisms. Zygotic expression of fz10 is observed in the posterior tail mesenchyme, dorsal neural tube, and different parts of the brain.


Subject(s)
Gene Expression Regulation, Developmental , Zebrafish Proteins , Zebrafish/genetics , Amino Acid Sequence , Animals , Brain/embryology , Brain/physiology , Chromosome Mapping , Embryo, Nonmammalian , Frizzled Receptors , Gastrula , Head/embryology , Molecular Sequence Data , Receptors, Cell Surface/genetics , Receptors, Cell Surface/metabolism , Receptors, G-Protein-Coupled , Tail/embryology , Tail/physiology , Zebrafish/embryology
20.
Development ; 125(21): 4283-92, 1998 Nov.
Article in English | MEDLINE | ID: mdl-9753682

ABSTRACT

We have used zebrafish as a model system for the study of vertebrate dorsoventral patterning. We isolated a maternally expressed and dorsal organizer localized member of the frizzled family of wnt receptors. Wild-type and dominant, loss-of-function molecules in misexpression studies demonstrate frizzled function is necessary and sufficient for dorsal mesoderm specification. frizzled activity is antagonized by the action of GSK-3, and we show GSK-3 is also required for zebrafish dorsal mesoderm formation. frizzled cooperatively interacts with the maternally encoded zebrafish wnt8 protein in dorsal mesodermal fate determination. This frizzled -mediated wnt pathway for dorsal mesoderm specification provides the first evidence for the requirement of a wnt-like signal in vertebrate axis determination.


Subject(s)
Body Patterning , Gene Expression Regulation, Developmental , Membrane Proteins/physiology , Mesoderm/physiology , Zebrafish Proteins , Amino Acid Sequence , Animals , Blotting, Northern , Calcium-Calmodulin-Dependent Protein Kinases/metabolism , Calcium-Calmodulin-Dependent Protein Kinases/physiology , Cytoskeletal Proteins , Embryo, Nonmammalian/metabolism , Embryo, Nonmammalian/physiology , Glycogen Synthase Kinase 3 , In Situ Hybridization , Membrane Proteins/genetics , Membrane Proteins/metabolism , Mesoderm/metabolism , Molecular Sequence Data , Mutagenesis , Proteins/physiology , Wnt Proteins , Zebrafish/embryology
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