QoI Resistance and Mitochondrial Genetic Structure of Zymoseptoria tritici in Morocco.

In total, 230 single-conidial isolates of the fungal wheat pathogen Zymoseptoria tritici (formerly Septoria tritici, teleomorph: Mycosphaerella graminicola) were sampled in Morocco in 2008 and 2010 to assess resistance against quinone outside inhibitors (QoIs), a widely used group of fungicides in wheat pest management. All 134 isolates sampled in 2008 were QoI sensitive. In contrast, 9 of the 96 isolates from the 2010 collection were resistant, suggesting a recent emergence of the resistance. Mitochondrial (mt)DNA-sequence analyses identified four haplotypes among the resistant isolates. Wright's F statistics (FST) analyses from mtDNA sequences revealed a shallow population structure of Z. tritici within Morocco and a substantial asymmetric gene flow from Europe into Morocco. A phylogenetic reconstruction including Moroccan and European isolates clustered the haplotypes regardless of their geographic origin. The four Moroccan QoI-resistant mitochondrial haplotypes clustered in two distinct clades in the tree topology, suggesting at least two independent origins of the resistance. This study reported, for the first time, the occurrence of QoI-resistant genotypes of Z. tritici in Morocco. Our findings are consistent with the hypothesis that QoI resistance emerged very recently through parallel genetic adaptation in Morocco, although gene flow from Europe cannot be excluded.

Wheat Mycosphaerella graminicola interactions in Morocco.

Mycosphaerella graminicola is nowadays one of the most important foliar pathogens on wheat crops worldwide and more specifically in Morocco. The interactions of eight monoconidial isolates of this fungus, sampled in different regions of Morocco, with 3 Moroccan wheat cultivars (Massira, Amal and Arrihan) differing in their resistance level to the pathogen, were studied using artificial inoculations in the greenhouse. Disease notations (percentage of third leaf areas covered by lesions bearing pycnidia) at 21 days post inoculation revealed significant differences among the different isolate-cultivar combinations. Most isolates expressed pathogenicity profiles in accordance with the resistance levels of the cultivars studied. However, T01701 showed a similar pathogenicity level on the three cultivars and T01718 induced more disease on the moderately resistant cv. Amal compared to the susceptible cv. Massira and the resistant cv. Arrihan, respectively. Furthermore, the infection process of the isolate T01757 was investigated at 4, 8, 12, 16 and 21 days post-inoculation. This isolate exhibited a disease gradient (65%, 24% and 5%) which negatively correlated with the resistance levels of the cultivars. No significant differences were obtained regarding the rates of spore germination and leaf penetration events. However, rates of mesophyll colonization positively correlated with the disease levels scored on the cultivars. This study supports the presence of strain-cultivar interactions between wheat and M. graminicola in Morocco and confirms the importance of mesophyll colonization in disease establishment and extension.

Detection of strobilurin-resistant isolates of Mycosphaerella graminicola in Morocco.

Septoria tritici blotch caused by Mycosphaerella graminicola (anamorph: Septoria tritici) is nowadays one of the most frequently occurring diseases on both bread and durum wheat crops. Two hundred and thirty isolates of the fungus were sampled from six distinct wheat-producing regions of Morocco in order to investigate the resistance of M. graminicola to strobilurins in this country, where this fungicide class is increasingly used in wheat-pest management. A subset of 134 isolates was first collected in 2008 from Meknes-Tafilalet, Tadla-Azilal, Gharb and Chaouia. Furthermore, 96 additional isolates were sampled in 2010 from the fourth regions investigated in 2008 plus Fes-Boulmane and Doukkala-Abda. Sensitivity or resistance within the isolates were determined by screening the G143A cytochrome b substitution conferring resistance. We used a mismatch amplification mutation assay allowing the amplification of either G143 (sensitive) or A143 (resistant) allele. All the 2008 isolates were found to be sensitive since they carry the wild-type allele G143. However, 9 (9%) out of the 2010 isolates were found to contain the resistant allele A143 and therefore to be resistant. Four of them were from Gharb and five from Fes-Boulmane. This study highlighted for the first time the occurrence of strobilurin-resistant isolates of M. graminicola in Morocco. Further genetic investigations should determine if the resistant isolates emerged independently in Morocco or traveled by wind-migration from Europe.

Both mating types of the wheat pathogen Mycosphaerella graminicola are present in Morocco.

Septoria tritici blotch caused by the heterothallic ascomycete Mycosphaerella graminicola is one of the most currently damaging diseases on wheat crops worldwide. So far, no information was reported about the status of sexual reproduction of this pathogen under Moroccan conditions. We investigated here for the first time the occurrence of the two mating types (MAT1-1 and MAT1-2) of M. graminicola in Morocco by sampling 141 single-conidial isolates from 4 important wheat producing regions (Gharb, Saïs, Chaouia and Tadla). The mating type of each isolate was determined by amplification with multiplex PCR of a partial sequence from the corresponding idiomorph. Overall, 43% out of the assessed isolates were MAT1-1 and 57 % were MAT1-2. Both mating types were identified within the 3 sampled regions Gharb, Saïs and Chaouia, but not in Tadla, where only MAT1-2 isolates were found. The presence of the two mating types highlighted here offers a suitable genetic condition for M. graminicola to occur sexual reproduction in Morocco. The potential of sexual recombination will be examined by the study of mating type frequencies using a large sample size as well as by searching and quantification of pseudothecia in the field.