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1.
Sci Rep ; 8(1): 1877, 2018 01 30.
Article in English | MEDLINE | ID: mdl-29382914

ABSTRACT

Nitrous acid (HONO) is an important precursor of the hydroxyl radical (OH), the atmosphere´s primary oxidant. An unknown strong daytime source of HONO is required to explain measurements in ambient air. Emissions from soils are one of the potential sources. Ammonia-oxidizing bacteria (AOB) have been identified as possible producers of these HONO soil emissions. However, the mechanisms for production and release of HONO in soils are not fully understood. In this study, we used a dynamic soil-chamber system to provide direct evidence that gaseous emissions from nitrifying pure cultures contain hydroxylamine (NH2OH), which is subsequently converted to HONO in a heterogeneous reaction with water vapor on glass bead surfaces. In addition to different AOB species, we found release of HONO also in ammonia-oxidizing archaea (AOA), suggesting that these globally abundant microbes may also contribute to the formation of atmospheric HONO and consequently OH. Since biogenic NH2OH is formed by diverse organisms, such as AOB, AOA, methane-oxidizing bacteria, heterotrophic nitrifiers, and fungi, we argue that HONO emission from soil is not restricted to the nitrifying bacteria, but is also promoted by nitrifying members of the domains Archaea and Eukarya.


Subject(s)
Bacteria/metabolism , Hydroxylamine/metabolism , Nitrification/physiology , Ammonia/metabolism , Archaea/metabolism , Atmosphere , Gases/metabolism , Hydroxyl Radical/metabolism , Nitrous Acid/metabolism , Oxidation-Reduction , Soil , Soil Microbiology
2.
Infect Genet Evol ; 27: 490-9, 2014 Oct.
Article in English | MEDLINE | ID: mdl-24394446

ABSTRACT

Quantitative resistance mediated by multiple genetic factors has been shown to increase the potential for durability of major resistance genes. This was demonstrated in the Leptosphaeria maculans/Brassica napus pathosystem in a 5year recurrent selection field experiment on lines harboring the qualitative resistance gene Rlm6 combined or not with quantitative resistance. The quantitative resistance limited the size of the virulent isolate population. In this study we continued this recurrent selection experiment in the same way to examine whether the pathogen population could adapt and render the major gene ineffective in the longer term. The cultivars Eurol, with a susceptible background, and Darmor, with quantitative resistance, were used. We confirmed that the combination of qualitative and quantitative resistance is an effective approach for controlling the pathogen epidemics over time. This combination did not prevent isolates virulent against the major gene from amplifying in the long term but the quantitative resistance significantly delayed for 5years the loss of effectiveness of the qualitative resistance and disease severity was maintained at a low level on the genotype with both types of resistance after the fungus population had adapted to the major gene. We also showed that diversity of AvrLm6 virulence alleles was comparable in isolates recovered after the recurrent selection on lines carrying either the major gene alone or in combination with quantitative resistance: a single repeat-induced point mutation and deletion events were observed in both situations. Breeding varieties which combine qualitative and quantitative resistance can effectively contribute to disease control by increasing the potential for durability of major resistance genes.


Subject(s)
Alleles , Ascomycota , Brassica napus/genetics , Brassica napus/microbiology , Disease Resistance/genetics , Plant Diseases/genetics , Biological Evolution , Genetic Variation , Minisatellite Repeats , Mutation , Polymorphism, Genetic , Seasons
3.
Science ; 341(6151): 1233-5, 2013 Sep 13.
Article in English | MEDLINE | ID: mdl-24031015

ABSTRACT

Abiotic release of nitrous acid (HONO) in equilibrium with soil nitrite (NO2(-)) was suggested as an important contributor to the missing source of atmospheric HONO and hydroxyl radicals (OH). The role of total soil-derived HONO in the biogeochemical and atmospheric nitrogen cycles, however, has remained unknown. In laboratory experiments, we found that for nonacidic soils from arid and arable areas, reactive nitrogen emitted as HONO is comparable with emissions of nitric oxide (NO). We show that ammonia-oxidizing bacteria can directly release HONO in quantities larger than expected from the acid-base and Henry's law equilibria of the aqueous phase in soil. This component of the nitrogen cycle constitutes an additional loss term for fixed nitrogen in soils and a source for reactive nitrogen in the atmosphere.


Subject(s)
Nitrogen Fixation , Nitrogen/metabolism , Nitrosomonas europaea/metabolism , Nitrous Acid/metabolism , Reactive Nitrogen Species/metabolism , Soil Microbiology , Ammonia/metabolism , Atmosphere/chemistry , Oxidation-Reduction
4.
Environ Sci Technol ; 47(4): 1930-6, 2013 Feb 19.
Article in English | MEDLINE | ID: mdl-23343053

ABSTRACT

Fast ozone (O(3)) measurements (1-50 Hz) in the atmosphere are required for airborne studies and for the measurement of ground-based O(3) fluxes by the eddy covariance technique. Fast response analyzers, based on heterogeneous chemiluminescence, need dye coated sensor discs on which the chemiluminescence is generated. In this study, we present three new preparation methods for those sensor discs. Currently available sensor discs exhibit a fast temporal decay of sensitivity, resulting in short duty times which is troublesome for many field applications. To produce sensor discs that provide more stable signals over time, three dyes and nine energy transfer reagents were tested (as well as different stoichiometric mixtures). The resulting optimal method saves 80% of the solid chemicals and shows a duty ozone dose that is prolonged by a factor of 3.5, revealing the same average sensitivity as currently available discs. In addition, we observed a strong effect of the adsorption matrix on the O(3) sensitivity, although silica discs from the same manufacturer were used. Application of the new sensor discs during field measurements showed that the results are consistent with the laboratory data.


Subject(s)
Luminescent Measurements/instrumentation , Ozone/analysis , Coloring Agents/chemistry , Energy Transfer
5.
Plant Dis ; 92(8): 1208-1214, 2008 Aug.
Article in English | MEDLINE | ID: mdl-30769494

ABSTRACT

The value of Katanning Early Maturing (KEM) breeding lines from Western Australia, derived from Brassica napus × B. juncea crosses, was assessed as a source of germplasm for resistance to blackleg disease (caused by Leptosphaeria maculans) in spring-type oilseed rape cultivars. The stability of blackleg resistance in these KEM lines was related to key cytological characteristics to determine why there are poor levels of introgression of this resistance into progeny. Promising recombinant KEM lines were crossed with the spring-type B. napus cv. Dunkeld, which has useful polygenic resistance to blackleg, and screened for resistance. The lines were analyzed cytologically for pairing of bivalents in each generation to aid in the selection of stable recombinant lines. KEM recombinant lines showing regular meiotic behavior and a high level of blackleg resistance were obtained for the first time. We also showed that the stable introgression of the B. juncea resistance from the KEM lines into a 'Dunkeld' background was possible. Inoculation of selfing and backcross populations with isolates of L. maculans having different AvrLm genes indicated that the B. juncea resistance gene, Rlm6, had been introgressed into a B. napus spring-type cultivar carrying polygenic resistance. The combination of both resistances would enhance the overall effectiveness of resistance against L. maculans. This is clearly needed in Australia and France where cultivars relying upon single dominant gene-based resistance for their effectiveness have proved not durable.

6.
Theor Appl Genet ; 115(7): 897-906, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17668174

ABSTRACT

Blackleg (stem canker) caused by the fungus Leptosphaeria maculans is one of the most damaging diseases of oilseed rape (Brassica napus). Crop relatives represent a valuable source of "new" resistance genes that could be used to diversify cultivar resistance. B. rapa, one of the progenitors of B. napus, is a potential source of new resistance genes. However, most of the accessions are heterozygous so it is impossible to directly detect the plant genes conferring specific resistance due to the complex patterns of avirulence genes in L. maculans isolates. We developed a strategy to simultaneously characterize and introgress resistance genes from B. rapa, by homologous recombination, into B. napus. One B. rapa plant resistant to one L. maculans isolate was used to produce B. rapa backcross progeny and a resynthesized B. napus plant from which a population of doubled haploid lines was derived after crossing with natural B. napus. We then used molecular analyses and resistance tests on these populations to identify and map the resistance genes and to characterize their introgression from B. rapa into B. napus. Three specific genes conferring resistance to L. maculans (Rlm1, Rlm2 and Rlm7) were identified in B. rapa. Comparisons of genetic maps showed that two of these genes were located on the R7 linkage group, in a region homologous to the region on linkage group N7 in B. napus, where these genes have been reported previously. The results of our study offer new perspectives for gene introgression and cloning in Brassicas.


Subject(s)
Ascomycota/pathogenicity , Brassica napus/genetics , Brassica napus/microbiology , Brassica rapa/genetics , Brassica rapa/microbiology , Gene Transfer Techniques , Plant Diseases/genetics , Chromosome Mapping , Genes, Plant , Plant Diseases/microbiology
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