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1.
Front Neurosci ; 13: 1339, 2019.
Article in English | MEDLINE | ID: mdl-31920504

ABSTRACT

The aggregation of the human tau protein into neurofibrillary tangles is directly diagnostic of many neurodegenerative conditions termed tauopathies. The species, factors and events that are responsible for the initiation and propagation of tau aggregation are not clearly established, even in a simplified and artificial in vitro system. This motivates the mechanistic study of in vitro aggregation of recombinant tau from soluble to fibrillar forms, for which polyanionic cofactors are the most commonly used external inducer. In this study, we performed biophysical characterizations to unravel the mechanisms by which cofactors induce fibrillization. We first reinforce the idea that cofactors are the limiting factor to generate ThT-active tau fibrils, and establish that they act as templating reactant that trigger tau conformational rearrangement. We show that heparin has superior potency for recruiting monomeric tau into aggregation-competent species compared to any constituent intermediate or aggregate "seeds." We show that tau and cofactors form intermediate complexes whose evolution toward ThT-active fibrils is tightly regulated by tau-cofactor interactions. Remarkably, it is possible to find mild cofactors that complex with tau without forming ThT-active species, except when an external catalyst (e.g., a seed) is provided to overcome the energy barrier. In a cellular context, we propose the idea that tau could associate with cofactors to form a metastable complex that remains "inert" and reversible, until encountering a relevant seed that can trigger an irreversible transition to ß-sheet containing species.

2.
Chem Commun (Camb) ; 54(62): 8653, 2018 08 11.
Article in English | MEDLINE | ID: mdl-30027190

ABSTRACT

Correction for 'Heparin-induced tau filaments are structurally heterogeneous and differ from Alzheimer's disease filaments' by Yann Fichou et al., Chem. Commun., 2018, 54, 4573-4576.

3.
Chem Commun (Camb) ; 54(36): 4573-4576, 2018 05 01.
Article in English | MEDLINE | ID: mdl-29664486

ABSTRACT

Alzheimer's disease (AD) is characterized by the presence of tau filaments in the brain whose structure was recently solved. The formation of AD filaments is routinely modeled in vitro by mixing tau with heparin. This study shows that heparin-induced tau filaments are markedly different from the AD filaments and are highly heterogeneous.


Subject(s)
Alzheimer Disease/pathology , Heparin/metabolism , Membrane Proteins/metabolism , Peptide Fragments/metabolism , Protein Multimerization/drug effects , Amino Acid Sequence , Amyloid/chemistry , Amyloid/metabolism , Heparin/chemistry , Humans , Membrane Proteins/chemistry , Molecular Structure , Peptide Fragments/chemistry , Protein Aggregation, Pathological/metabolism , Protein Binding , Protein Structure, Quaternary/drug effects , Pyrrolidines/chemistry , Spin Labels , Thiosulfonic Acids/chemistry
4.
Methods Cell Biol ; 141: 89-112, 2017.
Article in English | MEDLINE | ID: mdl-28882313

ABSTRACT

Amyloid fiber-forming proteins are predominantly intrinsically disordered proteins (IDPs). The protein tau, present mostly in neurons, is no exception. There is a significant interest in the study of tau protein aggregation mechanisms, given the direct correlation between the deposit of ß-sheet structured neurofibrillary tangles made of tau and pathology in several neurodegenerative diseases, including Alzheimer's disease. Among the core unresolved questions is the nature of the initial step triggering aggregation, with increasing attention placed on the question whether a conformational change of the IDPs plays a key role in the early stages of aggregation. Specifically, there is growing evidence that a shift in the conformation ensemble of tau is involved in its aggregation pathway, and might even dictate structural and pathological properties of mature fibers. Yet, because IDPs lack a well-defined 3D structure and continuously exchange between different conformers, it has been technically challenging to characterize their structural changes on-pathway to aggregation. Here, we make a case that double spin labeling of the ß-sheet stacking region of tau combined with pulsed double electron-electron resonance spectroscopy is a powerful method to assay conformational changes occurring during the course of tau aggregation, by probing intramolecular distances around aggregation-prone domains. We specifically demonstrate the potential of this approach by presenting recent results on conformation rearrangement of the ß-sheet stacking segment VQIINK (known as PHF6*) of tau. We highlight a canonical shift of the conformation ensemble, on-pathway and occurring at the earliest stage of aggregation, toward an opening of PHF6*. We expect this method to be applicable to other critical segments of tau and other IDPs.


Subject(s)
Electron Spin Resonance Spectroscopy/methods , Protein Aggregates , Protein Conformation , tau Proteins/chemistry , Humans
5.
PLoS Biol ; 15(7): e2002183, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28683104

ABSTRACT

Nonmembrane-bound organelles that behave like liquid droplets are widespread among eukaryotic cells. Their dysregulation appears to be a critical step in several neurodegenerative conditions. Here, we report that tau protein, the primary constituent of Alzheimer neurofibrillary tangles, can form liquid droplets and therefore has the necessary biophysical properties to undergo liquid-liquid phase separation (LLPS) in cells. Consonant with the factors that induce LLPS, tau is an intrinsically disordered protein that complexes with RNA to form droplets. Uniquely, the pool of RNAs to which tau binds in living cells are tRNAs. This phase state of tau is held in an approximately 1:1 charge balance across the protein and the nucleic acid constituents, and can thus be maximal at different RNA:tau mass ratios, depending on the biopolymer constituents involved. This feature is characteristic of complex coacervation. We furthermore show that the LLPS process is directly and sensitively tuned by salt concentration and temperature, implying it is modulated by both electrostatic interactions between the involved protein and nucleic acid constituents, as well as net changes in entropy. Despite the high protein concentration within the complex coacervate phase, tau is locally freely tumbling and capable of diffusing through the droplet interior. In fact, tau in the condensed phase state does not reveal any immediate changes in local protein packing, local conformations and local protein dynamics from that of tau in the dilute solution state. In contrast, the population of aggregation-prone tau as induced by the complexation with heparin is accompanied by large changes in local tau conformations and irreversible aggregation. However, prolonged residency within the droplet state eventually results in the emergence of detectable ß-sheet structures according to thioflavin-T assay. These findings suggest that the droplet state can incubate tau and predispose the protein toward the formation of insoluble fibrils.


Subject(s)
Protein Aggregation, Pathological , RNA/metabolism , tau Proteins/metabolism , Cells, Cultured , Humans , Temperature
6.
Sci Rep ; 7: 44739, 2017 03 17.
Article in English | MEDLINE | ID: mdl-28303942

ABSTRACT

The self-assembly of the microtubule associated tau protein into fibrillar cell inclusions is linked to a number of devastating neurodegenerative disorders collectively known as tauopathies. The mechanism by which tau self-assembles into pathological entities is a matter of much debate, largely due to the lack of direct experimental insights into the earliest stages of aggregation. We present pulsed double electron-electron resonance measurements of two key fibril-forming regions of tau, PHF6 and PHF6*, in transient as aggregation happens. By monitoring the end-to-end distance distribution of these segments as a function of aggregation time, we show that the PHF6(*) regions dramatically extend to distances commensurate with extended ß-strand structures within the earliest stages of aggregation, well before fibril formation. Combined with simulations, our experiments show that the extended ß-strand conformational state of PHF6(*) is readily populated under aggregating conditions, constituting a defining signature of aggregation-prone tau, and as such, a possible target for therapeutic interventions.


Subject(s)
Protein Aggregates , tau Proteins/chemistry , Amino Acid Sequence , Electrons , Heparin/pharmacology , Molecular Dynamics Simulation , Mutant Proteins/chemistry , Peptides/chemistry , Protein Conformation , Solutions , Time Factors , tau Proteins/ultrastructure
7.
J Phys Chem B ; 119(45): 14421-32, 2015 Nov 12.
Article in English | MEDLINE | ID: mdl-26484390

ABSTRACT

A peptide fragment of the human tau protein which stacks to form neat cross ß-sheet fibrils, resembling that found in pathological aggregation, (273)GKVQIINKKLDL(284) (here "R2/WT"), was modified with a spin-label at the N-terminus. With the resulting peptide, R2/G273C-SL, we probed events at time scales spanning seconds to hours after aggregation is initiated using transmission electron microscopy (TEM), thioflavin T (THT) fluorescence, ion mobility mass spectrometry (IMMS), electron paramagnetic resonance (EPR), and Overhauser dynamic nuclear polarization (ODNP) to determine if deliberate changes to its conformational states and population in solution influence downstream propensity to form fibrillar aggregates. We find varying solution conditions by adding the osmolyte urea or TMAO, or simply using different buffers (acetate buffer, phosphate buffer, or water), produces significant differences in early monomer/dimer populations and conformations. Crucially, these characteristics of the peptide in solution state before aggregation is initiated dictate the fibril formation propensity after aggregation. We conclude the driving forces that accelerate aggregation, when heparin is added, do not override the subtle intra- or interprotein interactions induced by the initial solvent conditions. In other words, the balance of protein-protein vs protein-solvent interactions present in the initial solution conditions is a critical driving force for fibril formation.


Subject(s)
tau Proteins/chemistry , Amino Acid Sequence , Benzothiazoles , Electron Spin Resonance Spectroscopy , Microscopy, Electron, Transmission , Molecular Sequence Data , Solutions , Spectrometry, Mass, Electrospray Ionization , Thiazoles/chemistry
8.
J Magn Reson ; 208(2): 298-304, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21185208

ABSTRACT

The (129)Xe nuclear spin polarization (P(Xe)) that can be achieved via spin-exchange optical pumping (SEOP) is typically limited at high in-cell xenon densities ([Xe](cell)), due primarily to corresponding reductions in the alkali metal electron spin polarization (e.g. P(Rb)) caused by increased non-spin-conserving Rb-Xe collisions. While demonstrating the utility of volume holographic grating (VHG)-narrowed lasers for Rb/(129)Xe SEOP, we recently reported [P. Nikolaou et al., JMR 197 (2009) 249] an anomalous dependence of the observed P(Xe) on the in-cell xenon partial pressure (p(Xe)), wherein P(Xe) values were abnormally low at decreased p(Xe), peaked at moderate p(Xe) (~300 torr), and remained surprisingly elevated at relatively high p(Xe) values (>1000 torr). Using in situ low-field (129)Xe NMR, it is shown that the above effects result from an unexpected, inverse relationship between the xenon partial pressure and the optimal cell temperature (T(OPT)) for Rb/(129)Xe SEOP. This interdependence appears to result directly from changes in the efficiency of one or more components of the Rb/(129)Xe SEOP process, and can be exploited to achieve improved P(Xe) with relatively high xenon densities measured at high field (including averaged P(Xe) values of ~52%, ~31%, ~22%, and ~11% at 50, 300, 500, and 2000 torr, respectively).


Subject(s)
Magnetic Resonance Spectroscopy/instrumentation , Rubidium/chemistry , Xenon/chemistry , Algorithms , Electromagnetic Fields , Lasers , Magnetic Resonance Spectroscopy/methods , Temperature , Xenon Isotopes
9.
J Magn Reson ; 197(2): 249-54, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19162517

ABSTRACT

Volume holographic gratings (VHGs) can be exploited to narrow the spectral output of high-power laser-diode arrays (LDAs) by nearly an order of magnitude, permitting more efficient generation of laser-polarized noble gases for various applications. A approximately 3-fold improvement in (129)Xe nuclear spin polarization, P(Xe), (compared to a conventional LDA) was achieved with the VHG-LDA's center wavelength tuned to a wing of the Rb D(1) line. Additionally, an anomalous dependence of P(Xe) on the xenon density within the OP cell is reported-including high P(Xe) values (>10%) at high xenon partial pressures (approximately 1000 torr).


Subject(s)
Holography/methods , Magnetic Resonance Spectroscopy/methods , Xenon/chemistry , Air Pressure , Lasers , Spin Labels , Temperature , Xenon Radioisotopes
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