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1.
Crystal structure of a tandem cystathionine-beta-synthase (CBS) domain protein (TM0935) from Thermotoga maritima at 1.87 A resolution.
Miller, Mitchell D; Schwarzenbacher, Robert; von Delft, Frank; Abdubek, Polat; Ambing, Eileen; Biorac, Tanya; Brinen, Linda S; Canaves, Jaume M; Cambell, Jamison; Chiu, Hsiu-Ju; Dai, Xiaoping; Deacon, Ashley M; DiDonato, Mike; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Hampton, Eric; Jaroszewski, Lukasz; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; Levin, Inna; McMullan, Daniel; McPhillips, Timothy M; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Robb, Alyssa; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 57(1): 213-7, 2004 Oct 01.
Article in English | MEDLINE | ID: mdl-15326606

Subject(s)
Bacterial Proteins/chemistry , Cystathionine beta-Synthase/chemistry , Thermotoga maritima/enzymology , Amino Acid Sequence , Crystallography , Models, Molecular , Molecular Sequence Data , Protein Structure, Secondary , Protein Structure, Tertiary
2.
Crystal structure of an orphan protein (TM0875) from Thermotoga maritima at 2.00-A resolution reveals a new fold.
Bakolitsa, Constantina; Schwarzenbacher, Robert; McMullan, Daniel; Brinen, Linda S; Canaves, Jaume M; Dai, Xiaoping; Deacon, Ashley M; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Jaroszewski, Lukasz; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Robb, Alyssa; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; von Delft, Frank; Wang, Xianhong; West, Bill; Wolf, Guenter; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 56(3): 607-10, 2004 Aug 15.
Article in English | MEDLINE | ID: mdl-15229892

Subject(s)
Bacterial Proteins/chemistry , Thermotoga maritima/chemistry , Amino Acid Sequence , Crystallography, X-Ray , Models, Molecular , Molecular Sequence Data , Multiprotein Complexes , Protein Structure, Secondary , Sequence Homology , Structural Homology, Protein
3.
Crystal structure of a novel manganese-containing cupin (TM1459) from Thermotoga maritima at 1.65 A resolution.
Jaroszewski, Lukasz; Schwarzenbacher, Robert; von Delft, Frank; McMullan, Daniel; Brinen, Linda S; Canaves, Jaume M; Dai, Xiaoping; Deacon, Ashley M; DiDonato, Mike; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Hampton, Eric; Levin, Inna; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Reyes, Ron; Rezezadeh, Fred; Robb, Alyssa; Sims, Eric; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 56(3): 611-4, 2004 Aug 15.
Article in English | MEDLINE | ID: mdl-15229893

Subject(s)
Bacterial Proteins/chemistry , Thermotoga maritima/chemistry , Amino Acid Sequence , Binding Sites , Crystallization , Manganese/analysis , Models, Molecular , Molecular Sequence Data , Multiprotein Complexes , Oxidoreductases/chemistry , Protein Structure, Secondary , Protein Structure, Tertiary , Structural Homology, Protein
4.
Crystal structure of a putative oxalate decarboxylase (TM1287) from Thermotoga maritima at 1.95 A resolution.
Schwarzenbacher, Robert; von Delft, Frank; Jaroszewski, Lukasz; Abdubek, Polat; Ambing, Eileen; Biorac, Tanya; Brinen, Linda S; Canaves, Jaume M; Cambell, Jamison; Chiu, Hsiu-Ju; Dai, Xiaoping; Deacon, Ashley M; DiDonato, Mike; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Hampton, Eric; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; Levin, Inna; McMullan, Daniel; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Robb, Alyssa; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 56(2): 392-5, 2004 Aug 01.
Article in English | MEDLINE | ID: mdl-15211523

Subject(s)
Bacterial Proteins/chemistry , Carboxy-Lyases/chemistry , Thermotoga maritima/enzymology , Amino Acid Sequence , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Carboxy-Lyases/genetics , Carboxy-Lyases/metabolism , Crystallography, X-Ray , Ligands , Models, Molecular , Molecular Sequence Data , Multigene Family , Oxalates/metabolism , Protein Conformation , Protein Structure, Secondary , Proteome , Recombinant Fusion Proteins/chemistry , Thermotoga maritima/genetics
5.
Crystal structure of a methionine aminopeptidase (TM1478) from Thermotoga maritima at 1.9 A resolution.
Spraggon, Glen; Schwarzenbacher, Robert; Kreusch, Andreas; McMullan, Daniel; Brinen, Linda S; Canaves, Jaume M; Dai, Xiaoping; Deacon, Ashley M; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Jaroszewski, Lukasz; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kuhn, Peter; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Rezezadeh, Fred; Robb, Alyssa; Sims, Eric; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; von Delft, Frank; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Lesley, Scott A; Wilson, Ian A.
Proteins ; 56(2): 396-400, 2004 Aug 01.
Article in English | MEDLINE | ID: mdl-15211524

Subject(s)
Aminopeptidases/chemistry , Bacterial Proteins/chemistry , Thermotoga maritima/enzymology , Amino Acid Sequence , Binding Sites , Crystallography, X-Ray , Methionyl Aminopeptidases , Models, Molecular , Molecular Sequence Data , Protein Conformation , Protein Structure, Tertiary
6.
Crystal structure of an Udp-n-acetylmuramate-alanine ligase MurC (TM0231) from Thermotoga maritima at 2.3 A resolution.
Spraggon, Glen; Schwarzenbacher, Robert; Kreusch, Andreas; Lee, Christian C; Abdubek, Polat; Ambing, Eileen; Biorac, Tanya; Brinen, Linda S; Canaves, Jaume M; Cambell, Jamison; Chiu, Hsiu-Ju; Dai, Xiaoping; Deacon, Ashley M; DiDonato, Mike; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Hampton, Eric; Jaroszewski, Lukasz; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kuhn, Peter; Levin, Inna; McMullan, Daniel; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Robb, Alyssa; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; von Delft, Frank; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Lesley, Scott A; Wilson, Ian A.
Proteins ; 55(4): 1078-81, 2004 Jun 01.
Article in English | MEDLINE | ID: mdl-15146505

Subject(s)
Bacterial Proteins/chemistry , Models, Molecular , Peptide Synthases/chemistry , Thermotoga maritima/enzymology , Amino Acid Sequence , Crystallography, X-Ray , Molecular Sequence Data
7.
Crystal structure of a glycerophosphodiester phosphodiesterase (GDPD) from Thermotoga maritima (TM1621) at 1.60 A resolution.
Santelli, Eugenio; Schwarzenbacher, Robert; McMullan, Daniel; Biorac, Tanya; Brinen, Linda S; Canaves, Jaume M; Cambell, Jamison; Dai, Xiaoping; Deacon, Ashley M; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Jaroszewski, Lukasz; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Rezezadeh, Fred; Robb, Alyssa; Sims, Eric; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; von Delft, Frank; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 56(1): 167-70, 2004 Jul 01.
Article in English | MEDLINE | ID: mdl-15162496

Subject(s)
Phosphoric Diester Hydrolases/chemistry , Thermotoga maritima/enzymology , Crystallization , Crystallography, X-Ray , Models, Molecular , Protein Structure, Secondary , Protein Structure, Tertiary , Reproducibility of Results
8.
Crystal structure of a ribose-5-phosphate isomerase RpiB (TM1080) from Thermotoga maritima at 1.90 A resolution.
Xu, Qingping; Schwarzenbacher, Robert; McMullan, Daniel; von Delft, Frank; Brinen, Linda S; Canaves, Jaume M; Dai, Xiaoping; Deacon, Ashley M; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Jaroszewski, Lukasz; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; Levin, Inna; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Robb, Alyssa; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; Wang, Xianhong; West, Bill; Wolf, Guenter; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 56(1): 171-5, 2004 Jul 01.
Article in English | MEDLINE | ID: mdl-15162497

Subject(s)
Aldose-Ketose Isomerases/chemistry , Thermotoga maritima/enzymology , Crystallization , Crystallography, X-Ray , Models, Molecular , Protein Structure, Secondary , Reproducibility of Results
9.
Crystal structure of an aspartate aminotransferase (TM1255) from Thermotoga maritima at 1.90 A resolution.
Schwarzenbacher, Robert; Jaroszewski, Lukasz; von Delft, Frank; Abdubek, Polat; Ambing, Eileen; Biorac, Tanja; Brinen, Linda S; Canaves, Jaume M; Cambell, Jamison; Chiu, Hsui-Ju; Dai, Xiaoping; Deacon, Ashley M; DiDonato, Mike; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Hampton, Eric; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; Levin, Inna; McMullan, Daniel; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Robb, Alyssa; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 55(3): 759-63, 2004 May 15.
Article in English | MEDLINE | ID: mdl-15103638

Subject(s)
Aspartate Aminotransferases/chemistry , Bacterial Proteins/chemistry , Models, Molecular , Thermotoga maritima/enzymology , Amino Acid Sequence , Crystallography, X-Ray , Molecular Sequence Data
10.
Crystal structure of a type II quinolic acid phosphoribosyltransferase (TM1645) from Thermotoga maritima at 2.50 A resolution.
Schwarzenbacher, Robert; Jaroszewski, Lukasz; von Delft, Frank; Abdubek, Polat; Ambing, Eileen; Biorac, Tanja; Brinen, Linda S; Canaves, Jaume M; Cambell, Jamison; Chiu, Hsiu-Ju; Dai, Xiaoping; Deacon, Ashley M; DiDonato, Mike; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Hampton, Eric; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; Levin, Inna; McMullan, Daniel; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Robb, Alyssa; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 55(3): 768-71, 2004 May 15.
Article in English | MEDLINE | ID: mdl-15103640

Subject(s)
Bacterial Proteins/chemistry , Models, Molecular , Pentosyltransferases/chemistry , Thermotoga maritima/enzymology , Amino Acid Sequence , Crystallography, X-Ray , Dimerization , Molecular Sequence Data
11.
Crystal structure of a phosphoribosylaminoimidazole mutase PurE (TM0446) from Thermotoga maritima at 1.77-A resolution.
Schwarzenbacher, Robert; Jaroszewski, Lukasz; von Delft, Frank; Abdubek, Polat; Ambing, Eileen; Biorac, Tanya; Brinen, Linda S; Canaves, Jaume M; Cambell, Jamison; Chiu, Hsiu-Ju; Dai, Xiaoping; Deacon, Ashley M; DiDonato, Mike; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Hampton, Eric; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; Levin, Inna; McMullan, Daniel; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Robb, Alyssa; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 55(2): 474-8, 2004 May 01.
Article in English | MEDLINE | ID: mdl-15048837

Subject(s)
Imidazoles/metabolism , Intramolecular Transferases/chemistry , Thermotoga maritima/enzymology , Amino Acid Sequence , Crystallization , Crystallography, X-Ray , Intramolecular Transferases/metabolism , Models, Molecular , Molecular Sequence Data , Protein Conformation , Reproducibility of Results
12.
Crystal structure of a putative PII-like signaling protein (TM0021) from Thermotoga maritima at 2.5 A resolution.
Schwarzenbacher, Robert; von Delft, Frank; Abdubek, Polat; Ambing, Eileen; Biorac, Tanja; Brinen, Linda S; Canaves, Jaume M; Cambell, Jamison; Chiu, Hsui-Ju; Dai, Xiaoping; Deacon, Ashley M; DiDonato, Mike; Elsliger, Marc-André; Eshagi, Said; Floyd, Ross; Godzik, Adam; Grittini, Carina; Grzechnik, Slawomir K; Hampton, Eric; Jaroszewski, Lukasz; Karlak, Cathy; Klock, Heath E; Koesema, Eric; Kovarik, John S; Kreusch, Andreas; Kuhn, Peter; Lesley, Scott A; Levin, Inna; McMullan, Daniel; McPhillips, Timothy M; Miller, Mitchell D; Morse, Andrew; Moy, Kin; Ouyang, Jie; Page, Rebecca; Quijano, Kevin; Robb, Alyssa; Spraggon, Glen; Stevens, Raymond C; van den Bedem, Henry; Velasquez, Jeff; Vincent, Juli; Wang, Xianhong; West, Bill; Wolf, Guenter; Xu, Qingping; Hodgson, Keith O; Wooley, John; Wilson, Ian A.
Proteins ; 54(4): 810-3, 2004 Mar 01.
Article in English | MEDLINE | ID: mdl-14997579

Subject(s)
Bacterial Proteins/chemistry , Signal Transduction , Thermotoga maritima/chemistry , Amino Acid Sequence , Bacterial Proteins/genetics , Crystallography, X-Ray , Models, Molecular , Molecular Sequence Data , PII Nitrogen Regulatory Proteins , Protein Structure, Secondary , Reproducibility of Results , Thermotoga maritima/genetics
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