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Acta Crystallogr F Struct Biol Commun ; 75(Pt 12): 744-749, 2019 Dec 01.
Article in English | MEDLINE | ID: mdl-31797816

ABSTRACT

The Rep domain of Wheat dwarf virus (WDV Rep) is an HUH endonuclease involved in rolling-circle replication. HUH endonucleases coordinate a metal ion to enable the nicking of a specific ssDNA sequence and the subsequent formation of an intermediate phosphotyrosine bond. This covalent protein-ssDNA adduct makes HUH endonucleases attractive fusion tags (HUH-tags) in a diverse number of biotechnological applications. Solving the structure of an HUH endonuclease in complex with ssDNA will provide critical information about ssDNA recognition and sequence specificity, thus enabling rationally engineered protein-DNA interactions that are programmable. The structure of the WDV Rep domain reported here was solved in the apo state from a crystal diffracting to 1.24 Šresolution and represents an initial step in the direction of solving the structure of a protein-ssDNA complex.


Subject(s)
DNA, Single-Stranded/metabolism , Endonucleases/chemistry , Geminiviridae/enzymology , Viral Proteins/chemistry , Amino Acid Sequence , Crystallization , Crystallography, X-Ray , DNA, Single-Stranded/chemistry , DNA, Single-Stranded/genetics , Endonucleases/genetics , Endonucleases/metabolism , Geminiviridae/genetics , Models, Molecular , Protein Binding , Protein Conformation , Protein Domains , Sequence Homology , Viral Proteins/genetics , Viral Proteins/metabolism
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