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1.
Rev. cuba. med. trop ; 71(2): e301, mayo.-ago. 2019. tab, graf
Article in English | CUMED, LILACS | ID: biblio-1093555

ABSTRACT

Introduction: Human papillomavirus (HPV) vaccines are based on the L1 major capsid protein. Objectives: To clone the HPV-18 L1 gene from a Cuban female HPV-18-infected patient and to express the full-length and deletion variants of the cloned HPV-18 L1 gene in Escherichia coli. Methods: The full-length HPV-18 L1 gene was PCR-amplified from total DNA isolated from a Cuban patient, cloned and finally subcloned into the E. coli expression vector pET26b. Three deletion mutants were constructed, which encode truncated proteins lacking 30 amino acids at the C-terminus in combination with 5, 6 or none deleted residue at the N-terminus. Production of L1 proteins in E. coli BL21(DE3) and E. coli SHuffle T7 was assessed by SDS-PAGE and Western blotting. Results: The cloned HPV-18 L1 gene was 99.9 por ciento similar to the African variant EF202152 and probably shares a common origin with the B lineage of genotype 18. The three truncated variants of HPV-18 L1 were produced at higher levels than the full-length HPV-18 L1 protein, attaining higher levels in E. coli BL21(DE3) and higher solubility in E. coli SHuffle. The C-terminus-only truncated variant, L1∆C30, was produced at similar levels to the HPV-18 L1s truncated at both termini. E. coli SHuffle produced about three times more amounts of L1∆C30 when grown under autoinduction conditions with respect to conventional induction and thus, amounts were comparable to those obtained in E. coli BL21(DE3) under conventional induction. Conclusions: Truncation of thirty amino acid residues at the carboxy-terminus of the HPV-18 L1 made a major contribution to the production and solubility of this wild-type protein in E. coli. This is the first report about soluble production of HPV-18 L1 protein in an E. coli SHuffle strain. However, higher amounts of L1 are needed to scale-up its production for developing an HPV vaccine candidate(AU)


Introducción: Las vacunas contra el virus del papiloma humano (VPH) se fundamentan en la proteína principal de la cápsida L1. Objetivo: Clonar el gen L1 del VPH-18 a partir de una paciente cubana infectada con VPH-18 y expresar las variantes de longitud completa y delecionadas del gen L1 del VPH-18 en Escherichia coli. Métodos: El gen L1 del VPH-18 de longitud completa se amplificó por PCR a partir de ADN total aislado de un paciente cubana, se clonó y finalmente se subclonó en el vector de expresión de E. coli pET26b. Se construyeron tres mutantes de deleción, que codifican para proteínas truncadas que carecen de 30 aminoácidos por el extremo carboxilo, en combinación con 5, 6 o ningún residuo delecionado por el extremo amino. La producción de las proteínas L1 en E. coli BL21(DE3) y E. coli SHuffle T7 se evaluó mediante SDS-PAGE y Western blot. Resultados: El gen L1 del VPH-18 clonado fue 99.9 percent similar a la variante africana EF202152 y probablemente comparte un origen común con el linaje B del genotipo 18. Las tres variantes truncadas de la proteína L1 del VPH-18 se produjeron a mayores niveles que la proteína L1 del VPH-18 de longitud completa, alcanzando mayores niveles en E. coli BL21(DE3) y mayor solubilidad en E. coli SHuffle. La variante truncada solo por el extremo carboxilo, L1(C30, se produjo a niveles similares a las proteínas L1 del VPH-18 truncadas por ambos extremos. E. coli SHuffle produjo aproximadamente tres veces más cantidades de L1(C30 cuando creció en condiciones de autoinducción, con respecto a la inducción convencional y, por ende, las cantidades fueron comparables a las obtenidas por E. coli BL21(DE3) bajo inducción convencional. Conclusiones: La truncación de treinta residuos de aminoácidos por el extremo carboxilo de la proteína L1 del VPH-18 tuvo una importante contribución a la producción y solubilidad de la proteína L1 nativa en E. coli. Este es el primer informe sobre la producción soluble de la proteína L1 del VPH-18 en una cepa de E. coli SHuffle. Sin embargo, se necesitan mayores cantidades de la proteína L1 para escalar su producción para desarrollar un candidato vacunal contra el VPH(AU)


Subject(s)
Humans , Female , Papillomaviridae/isolation & purification , Polymerase Chain Reaction , Escherichia coli Infections/immunology , Human papillomavirus 18/genetics , Cloning, Molecular/methods
2.
Curr Drug Targets ; 15(12): 1144-65, 2014.
Article in English | MEDLINE | ID: mdl-25341419

ABSTRACT

Malaria is a devastating human parasitic disease that receives enhanced attention due to the emergence of resistance to traditional drugs. Thus, the search for new molecular targets is a major goal. PfAM1 is an aminopeptidase from Plasmodium falciparum, William H. Welch 1897, belonging to the M1 family of metalloproteases, which is a promising target of inhibitors to block the intra-erythrocytic stages of the parasite. Since its identification in 1998, many efforts have been done to validate PfAM1 as an appropriate target of antimalarials. The present work is a critical review of the main structural, functional and kinetic characteristics of PfAM1, as well as a summary of the effects of key inhibitors at molecular and cellular levels. The systematization of experimental results should contribute to a better understanding of the properties of PfAM1 as a target of antimalarials and promote research projects focused on the development of PfAM1 inhibitors.


Subject(s)
Antimalarials/pharmacology , Enzyme Inhibitors/pharmacology , Plasmodium falciparum/enzymology , Aminopeptidases/antagonists & inhibitors , Aminopeptidases/chemistry , Antimalarials/chemistry , Enzyme Inhibitors/chemistry , Humans , Malaria/drug therapy , Malaria/parasitology , Molecular Targeted Therapy , Plasmodium falciparum/drug effects , Protozoan Proteins/antagonists & inhibitors , Protozoan Proteins/chemistry
3.
Protein Expr Purif ; 104: 103-14, 2014 12.
Article in English | MEDLINE | ID: mdl-25123643

ABSTRACT

Plasmodium falciparum neutral metallo-aminopeptidase (PfAM1), a member of the M1 family of metallo proteases, is a promising target for malaria, a devastating human parasitic disease. We report the high-level expression of PfAM1 in Escherichia coli BL21. An optimized gene, with a codon adaptation index and an average G/C content higher than the native gene, was synthesized and cloned in the pTrcHis2B vector. Optimal expression was achieved by induction with 1mM IPTG at 37°C for 18h. This allowed obtaining 100mg of recombinant PfAM1 (rPfAM1) per L of culture medium; 19% of the E. coli soluble protein mass was from rPFAM1. rPfAM1, fused to an amino-terminal 6×His tag, was purified in a single step by immobilized metal ion affinity chromatography. The protein showed only limited signs of proteolytic degradation, and this step increased purity 27-fold. The kinetic characteristics of rPfAM1, such as a neutral optimal pH, a preference for substrates with basic or hydrophobic amino acids at the P1 position, an inhibition profile typical of metallo-aminopeptidases, and inhibition from Zn(2+) excess, were similar to those of the native PfAM1. We have thus optimized an expression system that should be useful for identifying new PfAM1 inhibitors.


Subject(s)
Aminopeptidases/biosynthesis , Escherichia coli/metabolism , Plasmodium falciparum/enzymology , Aminopeptidases/chemistry , Aminopeptidases/genetics , Codon , Escherichia coli/genetics , Kinetics , Proteolysis , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Tandem Mass Spectrometry
4.
Virus Genes ; 48(3): 518-27, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24643345

ABSTRACT

The low abundant protein RstB2, encoded in the RS2 region of CTXϕ, is essential for prophage formation. However, the only biochemical activity so far described is the single/double-stranded DNA-binding capacity of that protein. In this paper, a recombinant RstB2 (rRstB2) protein was overexpressed in E. coli with a yield of 58.4 mg l(-1) in shaken cultures, LB broth. The protein, purified to homogeneity, showed an identity with rRstB2 by peptide mass fingerprinting. The apparent molecular weight of the RstB2 native protein suggests that occurs mostly as a monomer in solution. The monomers were able of reacting immediately upon exposure to DNA molecules. After a year of storage at -20 °C, the protein remains biologically active. Bioinformatics analysis of the amino acid sequence of RstB2 predicts the C-end of this protein to be disordered and highly flexible, like in many other single-stranded DNA-binding proteins. When compared with the gVp of M13, conserved amino acids are found at structurally or functionally important relative positions. These results pave the way for additional studies of structure and molecular function of RstB2 for the biology of CTXϕ.


Subject(s)
Bacteriophages/metabolism , DNA-Binding Proteins/metabolism , Vibrio cholerae/virology , Viral Proteins/metabolism , Amino Acid Sequence , Bacteriophages/chemistry , Bacteriophages/genetics , DNA, Single-Stranded/genetics , DNA, Single-Stranded/metabolism , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/genetics , Molecular Sequence Data , Molecular Weight , Sequence Alignment , Viral Proteins/chemistry , Viral Proteins/genetics
5.
Microbiology (Reading) ; 158(Pt 8): 2005-2016, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22653946

ABSTRACT

The bacterial pathogen Vibrio cholerae requires colonizination of the human small intestine to cause cholera. The anaerobic and slightly acidic conditions predominating there enhance toxicity of low copper concentrations and create a selective environment for bacteria with evolved detoxifying mechanisms. We reported previously that the VCA0260, VCA0261 and VC2216 gene products were synthesized only in V. cholerae grown in microaerobiosis or anaerobiosis. Here we show that ORFs VCA0261 and VCA0260 are actually combined into a single gene encoding a 18.7 kDa protein. Bioinformatic analyses linked this protein and the VC2216 gene product to copper tolerance. Following the approach of predict-mutate and test, we describe for the first time, to our knowledge, the copper tolerance systems operating in V. cholerae. Copper susceptibility analyses of mutants in VCA0261-0260, VC2216 or in the putative copper-tolerance-related VC2215 (copA ATPase) and VC0974 (cueR), under aerobic and anaerobic growth, revealed that CopA represents the main tolerance system under both conditions. The VC2216-encoded periplasmic protein contributes to resistance only under anaerobiosis in a CopA-functional background. The locus tag VCA0261-0260 encodes a copper-inducible, CueR-dependent, periplasmic protein, which mediates tolerance in aerobiosis, but under anaerobiosis its role is only evident in CopA knock-out mutants. None of the genes involved in copper homeostasis were required for V. cholerae virulence or colonization in the mouse model. We conclude that copper tolerance in V. cholerae, which lacks orthologues of the periplasmic copper tolerance proteins CueO, CusCFBA and CueP, involves CopA and CueR proteins along with the periplasmic Cot (VCA0261-0260) and CopG (VC2216) V. cholerae homologues.


Subject(s)
Bacterial Proteins/metabolism , Cholera/microbiology , Copper/metabolism , Periplasmic Proteins/metabolism , Vibrio cholerae/metabolism , Vibrio cholerae/pathogenicity , Amino Acid Sequence , Animals , Bacterial Proteins/genetics , Base Sequence , Gene Expression Regulation, Bacterial , Humans , Mice , Mice, Inbred BALB C , Molecular Sequence Data , Periplasmic Proteins/genetics , Vibrio cholerae/genetics , Virulence
6.
Microbes Infect ; 14(11): 968-78, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22546527

ABSTRACT

No commercially live vaccine against cholera caused by Vibrio cholerae O139 serogroup is available and it is currently needed. Virulent O139 strain CRC266 was genetically modified by firstly deleting multiple copies of the filamentous phage CTXφ, further tagging by insertion of the endoglucanase A coding gene from Clostridium thermocellum into the hemagglutinin/protease gene and finally deleting the mshA gene, just to improve the vaccine biosafety. One of the derived strains designated as TLP01 showed full attenuation and good colonizing capacity in the infant mouse cholera model, as well as highly immunogenic properties in the adult rabbit and rat models. Since TLP01 lacks MSHA fimbriae, it is refractory to infection with another filamentous phage VGJφ and therefore protected of acquiring CTXφ from a recombinant hybrid VGJφ/CTXφ. This strategy could reduce the possibilities of stable reversion to virulence out of the human gut. Furthermore, this vaccine strain was impaired to produce biofilms under certain culture conditions, which might have implications for the strain survival in natural settings contributing to vaccine biosafety as well. The above results has encouraged us to consider TLP01 as a live attenuated vaccine strain having an adequate performance in animal models, in terms of attenuation and immunogenicity, so that it fulfills the requirements to be evaluated in human volunteers.


Subject(s)
Cholera Vaccines/immunology , Fimbriae Proteins/immunology , Vibrio cholerae O139/immunology , Administration, Oral , Animals , Antibodies, Bacterial/immunology , Bacterial Shedding , Base Sequence , Biofilms , Cholera/immunology , Cholera/prevention & control , Cholera Vaccines/genetics , Cholera Vaccines/pharmacology , Disease Models, Animal , Feces/microbiology , Fimbriae Proteins/genetics , Intestinal Mucosa/immunology , Mannose-Binding Lectin/genetics , Mannose-Binding Lectin/immunology , Molecular Sequence Data , Rabbits , Rats , Rats, Sprague-Dawley , Sequence Alignment , Sequence Deletion/genetics , Statistics, Nonparametric , Vaccines, Attenuated/genetics , Vaccines, Attenuated/immunology , Vaccines, Attenuated/pharmacology , Vibrio cholerae O139/genetics
7.
Biochim Biophys Acta ; 1814(9): 1107-12, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21586349

ABSTRACT

pV(VGJΦ), a single-stranded DNA binding protein of the vibriophage VGJΦ was subject to biochemical analysis. Here, we show that this protein has a general affinity for single-stranded DNA (ssDNA) as documented by Electrophoretic Mobility Shift Assay (EMSA). The apparent molecular weight of the monomer is about 12.7kDa as measured by HPLC-SEC. Moreover, isoelectrofocusing showed an isoelectric point for pV(VGJΦ) of 6.82 pH units. Size exclusion chromatography in 150mM NaCl, 50mM sodium phosphate buffer, pH 7.0 revealed a major protein species of 27.0kDa, suggesting homodimeric protein architecture. Furthermore, pV(VGJΦ) binds ssDNA at extreme temperatures and the complex was stable after extended incubation times. Upon frozen storage at -20°C for a year the protein retained its integrity, biological activity and oligomericity. On the other hand, bioinformatics analysis predicted that pV(VGJΦ) protein has a disordered C-terminal, which might be involved in its functional activity. All the aforementioned features make pV(VGJΦ) interesting for biotechnological applications.


Subject(s)
Bacteriophages/chemistry , DNA-Binding Proteins/chemistry , Vibrio cholerae/chemistry , Viral Proteins/chemistry , Computational Biology , Isoelectric Point , Molecular Weight , Protein Multimerization
8.
Protein Eng Des Sel ; 24(6): 485-93, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21296830

ABSTRACT

The use of pore-forming toxins from sea anemones (actinoporins) in the construction of immunotoxins (ITs) against tumour cells is an alternative for cancer therapy. However, the main disadvantage of actinoporin-based ITs obtained so far has been the poor cellular specificity associated with the toxin's ability to bind and exert its activity in almost any cell membrane. Our final goal is the construction of tumour proteinase-activated ITs using a cysteine mutant at the membrane binding region of sticholysin-I (StI), a cytolysin isolated from the sea anemone Stichodactyla helianthus. The mutant and the ligand moiety would be linked by proteinase-sensitive peptides through the StI cysteine residue blocking the toxin binding region and hence the IT non-specific killing activity. To accomplish this objective the first step was to obtain the mutant StI W111C, and to evaluate the impact of mutating tryptophan 111 by cysteine on the toxin pore-forming capacity. After proteolysis of the cleavage sequence, a short peptide would remain attached to the toxin. The next step was to evaluate whether this mutant is able to form pores even with a residual peptide linked to cysteine 111. In this work we demonstrated that (i) StI W111C shows pore-forming capacity in a nanomolar range, although it is 8-fold less active than the wild-type recombinant StI, corroborating the previously reported importance of residue 111 for the binding of StI to membranes, and (ii) the mutant is able to form pores even with a residual seven-residue peptide linked to cysteine 111. In addition, it was demonstrated that binding of a large molecule to cysteine 111 renders an inactive toxin that is no longer able to bind to the membrane. These results validate the mutant StI W111C for its use in the construction of tumour proteinase-activated ITs.


Subject(s)
Immunotoxins/chemistry , Pore Forming Cytotoxic Proteins/chemistry , Animals , Cell Membrane/chemistry , Cell Membrane/metabolism , Chromatography, Gel , Chromatography, Ion Exchange , Dimerization , Immunotoxins/genetics , Immunotoxins/isolation & purification , Immunotoxins/metabolism , Models, Molecular , Mutation , Organic Chemicals/chemistry , Organic Chemicals/isolation & purification , Organic Chemicals/metabolism , Perforin , Pore Forming Cytotoxic Proteins/genetics , Pore Forming Cytotoxic Proteins/isolation & purification , Pore Forming Cytotoxic Proteins/metabolism , Protein Binding , Reproducibility of Results , Sea Anemones
9.
Microbiology (Reading) ; 156(Pt 1): 108-115, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19833774

ABSTRACT

A novel filamentous bacteriophage, designated VEJphi, was isolated from strain MO45 of Vibrio cholerae of the O139 serogroup. A molecular characterization of the phage was carried out, which included sequencing of its whole genome, study of the genomic structure, identification of the phage receptor, and determination of the function of some of the genes, such as those encoding the major capsid protein and the single-stranded DNA-binding protein. The genome nucleotide sequence of VEJphi, which consists of 6842 bp, revealed that it is organized in modules of functionally related genes in an array that is characteristic of the genus Inovirus (filamentous phages). VEJphi is closely related to other previously described filamentous phages of V. cholerae, including VGJphi, VSK and fs1. Like these phages, VEJphi uses as a cellular receptor the type IV fimbria called the mannose-sensitive haemagglutinin (MSHA). It was also demonstrated that VEJphi, like phage VGJphi, is able to transmit the genome of phage CTXphi, and therefore the genes encoding the cholera toxin (CT), horizontally among populations of V. cholerae expressing the MSHA receptor fimbria. This suggests that the variety of phages implicated in the horizontal transmission of the CT genes could be more diverse than formerly thought.


Subject(s)
Cholera Toxin/genetics , Genome, Viral , Inovirus/genetics , Vibrio cholerae/virology , Fimbriae Proteins/metabolism , Gene Transfer, Horizontal , Inovirus/isolation & purification , Inovirus/metabolism , Molecular Sequence Data , Receptors, Virus/metabolism , Sequence Analysis, DNA , Transduction, Genetic , Vibrio cholerae/genetics
10.
Vaccine ; 27(47): 6564-9, 2009 Nov 05.
Article in English | MEDLINE | ID: mdl-19720365

ABSTRACT

A randomized, double-blind, placebo-controlled clinical trial was conducted to evaluate the safety, reactogenicity and the immunogenicity of a 2 x 10(9)CFU dose of the 638 lyophilized live attenuated cholera vaccine for oral administration, formulated and produced at Finlay Institute, City of Havana, Cuba. Thirty-six healthy female and male adult volunteers from 18 to 40 years old were involved, clinically examined and laboratory tested after the informed consent signature. Adverse events were monitored and seroconversion rates and geometrical mean titer (GMT) of vibriocidal antibodies were tested in volunteer's sera samples. Neither serious adverse events nor other damages to the volunteers due to vaccine or placebo feeding were reported during the clinical follow-up period of this study; none of the adverse events registered within the first 72 h after inoculation were life-threatening for volunteers. Neither severe nor moderate adverse events were reported. Sixty-one percent of subjects showed mild expected adverse events in an interval lower than 24h up to the first 72 h, 75% of these in the vaccinated group and 18% in the placebo group. Fourteen days after inoculation the GMT of vibriocidal antibodies in the vaccine group significantly increased in comparison to the placebo group. All subjects in the vaccine group (24) seroconverted (100%). Results show that this vaccine is safe, well tolerated and immunogenic in healthy female and male volunteers.


Subject(s)
Cholera Vaccines/administration & dosage , Cholera/prevention & control , Administration, Oral , Adolescent , Adult , Antibodies, Bacterial/blood , Cholera/immunology , Cholera Vaccines/adverse effects , Cholera Vaccines/immunology , Cuba , Double-Blind Method , Female , Humans , Male , Vaccines, Attenuated/administration & dosage , Vaccines, Attenuated/adverse effects , Vaccines, Attenuated/immunology , Young Adult
11.
J Bacteriol ; 191(18): 5873-6, 2009 Sep.
Article in English | MEDLINE | ID: mdl-19617366

ABSTRACT

The native product of open reading frame 112 (orf112) and a recombinant variant of the RstB protein, encoded by Vibrio cholerae pathogen-specific bacteriophages VGJphi and CTXphi, respectively, were purified to more than 90% homogeneity. Orf112 protein was shown to specifically bind single-stranded genomic DNA of VGJphi; however, RstB protein unexpectedly bound double-stranded DNA in addition to the single-stranded genomic DNA. The DNA binding properties of these proteins may explain their requirement for the rolling circle replication of the respective phages and RstB's requirement for single-stranded-DNA chromosomal integration of CTXphi phage dependent on XerCD recombinases.


Subject(s)
Bacteriophages/metabolism , DNA-Binding Proteins/metabolism , Inovirus/metabolism , Vibrio cholerae/virology , Viral Proteins/metabolism , Virus Integration , Attachment Sites, Microbiological , Bacteriophages/classification , Bacteriophages/genetics , DNA/metabolism , DNA, Single-Stranded/metabolism , DNA-Binding Proteins/genetics , Electrophoresis, Polyacrylamide Gel , Gene Expression Regulation, Viral , Inovirus/classification , Inovirus/genetics , Open Reading Frames/genetics , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Viral Proteins/genetics
12.
Res Microbiol ; 160(1): 48-56, 2009.
Article in English | MEDLINE | ID: mdl-19015025

ABSTRACT

Pathogenesis of the facultative anaerobe Vibrio cholerae takes place at the gut under low oxygen concentrations. To identify proteins which change their expression level in response to oxygen availability, proteomes of V. cholerae El Tor C7258 grown in aerobiosis, microaerobiosis and anaerobiosis were compared by two-dimensional electrophoresis. Twenty-six differentially expressed proteins were identified which are involved in several processes including iron acquisition, alanine metabolism, purine synthesis, energy metabolism and stress response. Moreover, two proteins implicated in exopolysaccharide synthesis and biofilm formation were produced at higher levels under microaerobiosis and anaerobiosis, which suggests a role of oxygen deprivation in biofilm development in V. cholerae. In addition, six proteins encoded at the Vibrio pathogenicity island attained the highest expression levels under anaerobiosis, and five of them are required for colonization: three correspond to toxin-coregulated pilus biogenesis components, one to soluble colonization factor TcpF and one to accessory colonization factor A. Thus, anaerobiosis promotes synthesis of colonization factors in V. cholerae El Tor, suggesting that it may be a key in vivo signal for early stages of the pathogenic process of V. cholerae.


Subject(s)
Bacterial Proteins/metabolism , Genomic Islands , Proteome/metabolism , Vibrio cholerae/metabolism , Anaerobiosis , Bacterial Proteins/genetics , Electrophoresis, Gel, Two-Dimensional , Gene Expression Regulation, Bacterial , Oxygen/metabolism , Proteome/genetics , Vibrio cholerae/genetics , Vibrio cholerae/pathogenicity
13.
Res Microbiol ; 159(2): 81-7, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18222649

ABSTRACT

Restriction fragment length polymorphism analyses of the array of CTXPhi prophages in strains CRC262 and CRC266 of Vibrio cholerae O139 revealed the presence of copies of complete CTXPhi and pre-CTXPhi prophages coexisting at a single chromosomal locus in each strain. Restriction pattern and comparative nucleotide sequence analysis revealed pre-CTXPhi precursors of both the El Tor and Calcutta lineages. Thus, we hypothesize that two precursor variants independently acquired cholera toxin genes and gave rise to the current El Tor and Calcutta CTXPhi prophages. We discuss the implications of these results in terms of the evolution and origin of the current diversity of CTXPhi prophages.


Subject(s)
Prophages/genetics , Prophages/isolation & purification , Vibrio cholerae O139/virology , Virus Integration , Base Sequence , Cholera Toxin/genetics , DNA, Viral/analysis , DNA, Viral/genetics , Gene Dosage , India , Molecular Sequence Data , Polymorphism, Restriction Fragment Length , Prophages/classification , Prophages/physiology , Sequence Alignment , Sequence Analysis, DNA
14.
Proteomics ; 6(16): 4444-55, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16835850

ABSTRACT

A method for quantitative proteomic analysis based on the selective isolation of multiply charged peptides (RH peptides) containing arginine and histidine residues is described. Two pools of proteins are digested in tandem with lysyl-endopeptidase and trypsin and the primary amino groups of proteolytic peptides are separately labeled with d3- and d0-acetic anhydride. This reaction has a dual purpose: (i) to allow the relative protein quantification in two different conditions and (ii) to restrict the positive charges of peptides to the presence of arginine and histidine. The N-acylated peptides are separated by cation-exchange chromatography into two groups, neutral and singly charged peptides (R+H1) are retained into the column and can be eluted in batch or further fractionated using a saline gradient before LC-MS/MS analysis. In silico analysis revealed that the selective isolation of RH peptides considerably simplifies the complex mixture of peptides (three RH peptides/protein) and at the same time they represent 84% of the whole proteomes. The selectivity, and recovery of the method were evaluated with model proteins and with a complex mixture of proteins extracted from Vibrio cholerae.


Subject(s)
Peptides/chemistry , Proteome/chemistry , Vibrio cholerae/chemistry , Acetic Anhydrides/chemistry , Amino Acid Sequence , Arginine/chemistry , Chromatography, Ion Exchange , Histidine/chemistry , Mass Spectrometry , Molecular Sequence Data , Peptides/analysis , Recombinant Proteins/analysis , Recombinant Proteins/chemistry , Serine Endopeptidases/metabolism , Trypsin/metabolism
15.
Electrophoresis ; 27(14): 2857-64, 2006 Jul.
Article in English | MEDLINE | ID: mdl-16721902

ABSTRACT

DNA molecules of Vibrio cholerae and Aeromonas species were prepared by incubating immobilized cells for 4 and 2 h, respectively, with a nonenzymatic solution that contains chemical reagents only (NDSUPlus). This method gave results as reproducible as the enzymatic one that uses proteinase K, and rendered DNA molecules suitable for fingerprinting by mini-CHEF electrophoresis. As rapid DNA separations at high electric field are achieved in mini-CHEF chamber with low heat evolution, DNA restriction fragments were separated in 5 h at 10 V/cm in a single resolution window. Then, fragment separations in three resolution windows were done in 15 h. This time is shorter than the one needed by the large CHEF chamber for resolving fragments in a single resolution window. Three windows permitted to include larger numbers of restriction fragments in the calculation of isolate similarities. Both sample preparation and mini-CHEF electrophoresis may represent an alternative for performing massive epidemiological studies of V. cholerae and Aeromonas species.


Subject(s)
Aeromonas/isolation & purification , Bacterial Typing Techniques , DNA, Bacterial/analysis , Electrophoresis, Gel, Pulsed-Field/methods , Vibrio cholerae/isolation & purification , Aeromonas/genetics , DNA Fingerprinting , DNA, Bacterial/chemistry , Vibrio cholerae/genetics
16.
Infect Immun ; 73(5): 3018-24, 2005 May.
Article in English | MEDLINE | ID: mdl-15845509

ABSTRACT

Vibrio cholerae 638 is a living candidate cholera vaccine strain attenuated by deletion of the CTXPhi prophage from C7258 (O1, El Tor Ogawa) and by insertion of the Clostridium thermocellum endoglucanase A gene into the hemagglutinin/protease coding sequence. This vaccine candidate was previously found to be well tolerated and immunogenic in volunteers. This article reports a randomized, double-blind, placebo-controlled trial conducted to test short-term protection conferred by 638 against subsequent V. cholerae infection and disease in volunteers in Cuba. A total of 45 subjects were enrolled and assigned to receive vaccine or placebo. The vaccine contained 10(9) CFU of freshly harvested 638 buffered with 1.3% NaHCO(3), while the placebo was buffer alone. After vaccine but not after placebo intake, 96% of volunteers had at least a fourfold increase in vibriocidal antibody titers, and 50% showed a doubling of at least the lipopolysaccharide-specific immunoglobulin A titers in serum. At 1 month after vaccination, five volunteers from the vaccine group and five from the placebo group underwent an exploratory challenge study with 10(9) CFU of DeltaCTXPhi attenuated mutant strain V. cholerae 81. Only two volunteers from the vaccine group shed strain 81 in their feces, but none of them experienced diarrhea; in the placebo group, all volunteers excreted the challenge strain, and three had reactogenic diarrhea. An additional 12 vaccinees and 9 placebo recipients underwent challenge with 7 x 10(5) CFU of virulent strain V. cholerae 3008 freshly harvested from a brain heart infusion agar plate and buffered with 1.3% NaHCO(3). Three volunteers (25%) from the vaccine group and all from the placebo group shed the challenge agent in their feces. None of the 12 vaccinees but 7 volunteers from the placebo group had diarrhea, and 2 of the latter exhibited severe cholera (>5,000 g of diarrheal stool). These results indicate that at 1 month after ingestion of a single oral dose (10(9) CFU) of strain 638, volunteers remained protected against cholera infection and disease provoked by the wild-type challenge agent V. cholerae 3008. We recommend that additional vaccine lots of 638 be prepared under good manufacturing practices for further evaluation.


Subject(s)
Cholera Vaccines/administration & dosage , Cholera Vaccines/immunology , Cholera/prevention & control , Vibrio cholerae/immunology , Administration, Oral , Adolescent , Adult , Antibodies, Bacterial/blood , Bacteriophages/genetics , Cellulase/genetics , Cholera Vaccines/genetics , Clostridium thermocellum , Double-Blind Method , Feces/microbiology , Gene Deletion , Hemagglutinins/genetics , Humans , Male , Peptide Hydrolases/genetics , Vaccination , Vaccines, Attenuated/administration & dosage , Vaccines, Attenuated/genetics , Vaccines, Attenuated/immunology , Vibrio cholerae/genetics , Vibrio cholerae/pathogenicity , Vibrio cholerae/virology
17.
J Bacteriol ; 185(24): 7231-40, 2003 Dec.
Article in English | MEDLINE | ID: mdl-14645284

ABSTRACT

The main virulence factor of Vibrio cholerae, the cholera toxin, is encoded by the ctxAB operon, which is contained in the genome of the lysogenic filamentous phage CTX phi. This phage transmits ctxAB genes between V. cholerae bacterial populations that express toxin-coregulated pilus (TCP), the CTX phi receptor. In investigating new forms of ctxAB transmission, we found that V. cholerae filamentous phage VGJ phi, which uses the mannose-sensitive hemagglutinin (MSHA) pilus as a receptor, transmits CTX phi or its satellite phage RS1 by an efficient and highly specific TCP-independent mechanism. This is a novel type of specialized transduction consisting in the site-specific cointegration of VGJ phi and CTX phi (or RS1) replicative forms to produce a single hybrid molecule, which generates a single-stranded DNA hybrid genome that is packaged into hybrid viral particles designated HybP phi (for the VGJ phi/CTX phi hybrid) and HybRS phi (for the VGJ phi/RS1 hybrid). The hybrid phages replicate by using the VGJ phi replicating functions and use the VGJ phi capsid, retaining the ability to infect via MSHA. The hybrid phages infect most tested strains more efficiently than CTX phi, even under in vitro optimal conditions for TCP expression. Infection and lysogenization with HybP phi revert the V. cholerae live attenuated vaccine strain 1333 to virulence. Our results reinforce that TCP is not indispensable for the acquisition of CTX phi. Thus, we discuss an alternative to the current accepted evolutionary model for the emergence of new toxigenic strains of V. cholerae and the importance of our findings for the development of an environmentally safer live attenuated cholera vaccine.


Subject(s)
Bacteriophages/genetics , Cholera Toxin/genetics , Transduction, Genetic , Vibrio cholerae/genetics , Vibrio cholerae/virology , Cholera Vaccines , Gene Expression Regulation, Viral , Gene Transfer, Horizontal , Lysogeny , Plasmids/genetics , Vibrio cholerae/pathogenicity , Virulence
18.
J Bacteriol ; 185(19): 5685-96, 2003 Oct.
Article in English | MEDLINE | ID: mdl-13129939

ABSTRACT

We describe a novel filamentous phage, designated VGJ phi, isolated from strain SG25-1 of Vibrio cholerae O139, which infects all O1 (classical and El Tor) and O139 strains tested. The sequence of the 7,542 nucleotides of the phage genome reveals that VGJ phi has a distinctive region of 775 nucleotides and a conserved region with an overall genomic organization similar to that of previously characterized filamentous phages, such as CTX phi of V. cholerae and Ff phages of Escherichia coli. The conserved region carries 10 open reading frames (ORFs) coding for products homologous to previously reported peptides of other filamentous phages, and the distinctive region carries one ORF whose product is not homologous to any known peptide. VGJ phi, like other filamentous phages, uses a type IV pilus to infect V. cholerae; in this case, the pilus is the mannose-sensitive hemagglutinin. VGJ phi-infected V. cholerae overexpresses the product of one ORF of the phage (ORF112), which is similar to single-stranded DNA binding proteins of other filamentous phages. Once inside a cell, VGJ phi is able to integrate its genome into the same chromosomal attB site as CTX phi, entering into a lysogenic state. Additionally, we found an attP structure in VGJ phi, which is also conserved in several lysogenic filamentous phages from different bacterial hosts. Finally, since different filamentous phages seem to integrate into the bacterial dif locus by a general mechanism, we propose a model in which repeated integration events with different phages might have contributed to the evolution of the CTX chromosomal region in V. cholerae El Tor.


Subject(s)
Bacteriophages/genetics , Inovirus/classification , Inovirus/genetics , Vibrio cholerae/virology , Virus Integration , Attachment Sites, Microbiological , Bacterial Proteins/chemistry , Bacteriophages/physiology , Base Sequence , Chromosomes, Bacterial , Genome, Viral , Inovirus/physiology , Molecular Sequence Data , Sequence Analysis, DNA , Viral Proteins/chemistry
19.
Vaccine ; 21(11-12): 1282-91, 2003 Mar 07.
Article in English | MEDLINE | ID: mdl-12559810

ABSTRACT

The hemagglutinin/protease (HA/P) seems to be an attractive locus for the insertion of heterologous tags in live cholera vaccine strains. A deltaCTXphi spontaneous mutant derived from a pathogenic strain of O139 Vibrio cholerae was sequentially manipulated to obtain hapA Colon, two colons celA derivatives which were later improved in their environmental safety by means of a thyA mutation. All the strains here obtained showed similar phenotypes in traits known to be remarkable for live cholera vaccines irrespective of their motility phenotypes, although the hapA mutants had a 10-fold decrease in their colonisation capacity compared with their parental strains in the infant mouse cholera model. However, the subsequent thyA mutation did not affect their colonisation properties in the same model. These preliminary results pave the way for further clinical assays to confirm the possibilities of these vaccine prototypes as safe and effective tools for the prevention of O139 cholera.


Subject(s)
Cholera Vaccines/immunology , O Antigens/immunology , Vibrio cholerae O139/immunology , Animals , Antibodies, Bacterial/biosynthesis , Antibodies, Bacterial/immunology , Bacterial Capsules/biosynthesis , Bacterial Capsules/immunology , Cellulase/genetics , Cholera/prevention & control , Cholera Toxin/biosynthesis , Cholera Toxin/genetics , Clostridium/genetics , Drug Resistance , Drug Resistance, Multiple, Bacterial , Genes, Synthetic , Hemagglutination Tests , Immunoglobulin G/biosynthesis , Immunoglobulin G/immunology , Metalloendopeptidases/genetics , Mutagenesis, Insertional , Rabbits , Safety , Streptomycin/pharmacology , Trimethoprim, Sulfamethoxazole Drug Combination/pharmacology , Vibrio cholerae O139/drug effects , Vibrio cholerae O139/enzymology , Vibrio cholerae O139/genetics
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