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1.
Article in English | MEDLINE | ID: mdl-38284691

ABSTRACT

Nosocomial infections, also known as healthcare-associated infections, are a signif-icant global concern due to their strong association with high mortality and morbidity in both developed and developing countries. These infections are caused by a variety of pathogens, particularly the ESKAPE group of bacteria, which includes the six pathogens Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudo-monas aeruginosa, and Enterobacter spp. These bacteria have demonstrated noteworthy re-sistance to different antibiotics. Antimicrobial resistance mechanisms can manifest in various forms, including restricting drug uptake, modifying drug targets, inactivating drugs, active drug efflux, and biofilm formation. Accordingly, various strategies have been developed to combat antibiotic-resistant bacteria. These strategies encompass the development of new antibiotics, the utilization of bacterio-phages that specifically target these bacteria, antimicrobial combination therapy and the use of peptides or enzymes that target the genomes or essential proteins of resistant bacteria. Among promising approaches to overcome antibiotic resistance, the CRISPR/Cas system stands out and offers many advantages. This system enables precise and efficient editing of genetic material at specific locations in the genome. Functioning as a bacterial "adaptive im-mune system," the CRISPR/Cas system recognizes, degrades, and remembers foreign DNA sequences through the use of spacer DNA segments that are transcribed into CRISPR RNAs (crRNA). This paper has focused on nosocomial infections, specifically the pathogens involved in hospi-tal infections, the mechanisms underlying bacterial resistance, and the strategies currently em-ployed to address this issue. Special emphasis has been placed on the application of CRISPR/Cas technology for overcoming antimicrobial resistance.

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4.
Patterns (N Y) ; 2(4): 100240, 2021 Apr 09.
Article in English | MEDLINE | ID: mdl-33982030
5.
Patterns (N Y) ; 1(8): 100134, 2020 Nov 13.
Article in English | MEDLINE | ID: mdl-33294871
6.
Patterns (N Y) ; 1(7): 100117, 2020 Oct 09.
Article in English | MEDLINE | ID: mdl-33205141

ABSTRACT

The use of AI algorithms for categorizing medical images has become very popular and critical in the diagnosis of various diseases. Current computer-aided diagnosis (CAD) systems are hugely dependent on good quality, well-annotated data captured by professional medical equipment. In many remote areas, a lack of medical equipment and medical specialists that are respectively necessary for producing good quality data and annotating data, have caused a data gap and has resulted in no possibility of using CAD systems in those areas. Here, I point out other sources of data by previewing a recently published dataset that could help resolve this worldwide issue.

7.
Patterns (N Y) ; 1(7): 100125, 2020 Oct 09.
Article in English | MEDLINE | ID: mdl-33205144
9.
Brain Struct Funct ; 222(9): 4079-4088, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28608287

ABSTRACT

In depression, disrupted circadian rhythms reflect abnormalities in the central circadian pacemaker, the hypothalamic suprachiasmatic nucleus (SCN). Although many SCN neurons are said to be GABAergic, it was not yet known whether and how SCN GABA changes occur in the SCN in depression. We, therefore, studied GABA in the SCN in relation to the changes in arginine vasopressin (AVP), which is one of the major SCN output systems. Postmortem hypothalamus specimens of 13 subjects suffering from depression and of 13 well-matched controls were collected. Quantitative immunocytochemistry was used to analyze the protein levels of glutamic acid decarboxylase (GAD)65/67 and AVP, and quantitative in situ hybridization was used to measure transcript levels of GAD67 in the SCN. There were a significant 58% increase of SCN GAD65/67-ir and a significant 169% increase of SCN GAD67-mRNA in the depression group. In addition, there were a significant 253% increase of AVP-ir in female depression subjects but not in male depression patients. This sex difference was supported by a re-analysis of SCN AVP-ir data of a previous study of our group. Moreover, SCN-AVP-ir showed a significant negative correlation with age in the control group and in the male, but not in the female depression group. Given the crucial role of GABA in mediating SCN function, our finding of increased SCN GABA expression may significantly contribute to the disordered circadian rhythms in depression. The increased SCN AVP-ir in female-but not in male-depression patients-may reflect the higher vulnerability for depression in women.


Subject(s)
Depression/pathology , Glutamate Decarboxylase/metabolism , Suprachiasmatic Nucleus/metabolism , Aged , Aged, 80 and over , Arginine Vasopressin/metabolism , Female , Glutamate Decarboxylase/genetics , Humans , Male , RNA, Messenger/metabolism , Sex Factors , Statistics, Nonparametric , Suprachiasmatic Nucleus/ultrastructure , gamma-Aminobutyric Acid/metabolism
10.
ASN Neuro ; 8(5)2016 10.
Article in English | MEDLINE | ID: mdl-27697884

ABSTRACT

One feature of the mammalian circadian clock, situated in the suprachiasmatic nucleus (SCN), is its ability to measure day length and thereby contribute to the seasonal adaptation of physiology and behavior. The timing signal from the SCN, namely the 24 hr pattern of electrical activity, is adjusted according to the photoperiod being broader in long days and narrower in short days. Vasoactive intestinal peptide and gamma-aminobutyric acid play a crucial role in intercellular communication within the SCN and contribute to the seasonal changes in phase distribution. However, little is known about the underlying ionic mechanisms of synchronization. The present study was aimed to identify cellular mechanisms involved in seasonal encoding by the SCN. Mice were adapted to long-day (light-dark 16:8) and short-day (light-dark 8:16) photoperiods and membrane properties as well as K+ currents activity of SCN neurons were measured using patch-clamp recordings in acute slices. Remarkably, we found evidence for a photoperiodic effect on the fast delayed rectifier K+ current, that is, the circadian modulation of this ion channel's activation reversed in long days resulting in 50% higher peak values during the night compared with the unaltered day values. Consistent with fast delayed rectifier enhancement, duration of action potentials during the night was shortened and afterhyperpolarization potentials increased in amplitude and duration. The slow delayed rectifier, transient K+ currents, and membrane excitability were not affected by photoperiod. We conclude that photoperiod can change intrinsic ion channel properties of the SCN neurons, which may influence cellular communication and contribute to photoperiodic phase adjustment.


Subject(s)
Delayed Rectifier Potassium Channels/metabolism , Neurons/physiology , Photoperiod , Suprachiasmatic Nucleus/cytology , Suprachiasmatic Nucleus/physiology , Animals , Biophysics , Dose-Response Relationship, Drug , Electric Stimulation , In Vitro Techniques , Male , Membrane Potentials/drug effects , Mice , Mice, Inbred C57BL , Neurons/drug effects , Patch-Clamp Techniques , Potassium Channel Blockers/pharmacology , Tetraethylammonium/pharmacology , Time Factors
11.
Neurobiol Aging ; 36(6): 2176-83, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25735218

ABSTRACT

Aging impairs the function of the suprachiasmatic nucleus (SCN, the central mammalian clock), leading to a decline in the circadian rhythm of many physiological processes, including sleep-wake rhythms. Recent studies have found evidence of age-related changes in the circadian regulation of potassium currents; these changes presumably lead to a decrease in the SCN's electrical rhythm amplitude. Current through large-conductance Ca(2+)-activated K(+) (BK) channels promote rhythmicity in both SCN neuronal activity and behavior. In many neuron types, changes in BK activity are correlated with changes in intracellular Ca(2+) concentration ([Ca(2+)]i). We performed patch-clamp recordings of SCN neurons in aged mice and observed that the circadian modulation of BK channel activity was lost because of a reduction in BK currents during the night. This reduced current diminished the afterhyperpolarization, depolarized the resting membrane potential, widened the action potential, and increased [Ca(2+)]i. These data suggest that reduced BK current increases [Ca(2+)]i by altering the action potential waveform, possibly contributing to the observed age-related phenotype.


Subject(s)
Aging , Circadian Clocks/genetics , Circadian Rhythm/genetics , Electric Conductivity , Large-Conductance Calcium-Activated Potassium Channels/physiology , Suprachiasmatic Nucleus/pathology , Suprachiasmatic Nucleus/physiopathology , Action Potentials/genetics , Action Potentials/physiology , Animals , Calcium/metabolism , Circadian Clocks/physiology , Membrane Potentials/genetics , Membrane Potentials/physiology , Mice, Inbred C57BL , Patch-Clamp Techniques
12.
Proc Natl Acad Sci U S A ; 111(26): 9627-32, 2014 Jul 01.
Article in English | MEDLINE | ID: mdl-24979761

ABSTRACT

The balance between excitation and inhibition is essential for the proper function of neuronal networks in the brain. The inhibitory neurotransmitter γ-aminobutyric acid (GABA) contributes to the network dynamics within the suprachiasmatic nucleus (SCN), which is involved in seasonal encoding. We investigated GABAergic activity and observed mainly inhibitory action in SCN neurons of mice exposed to a short-day photoperiod. Remarkably, the GABAergic activity in a long-day photoperiod shifts from inhibition toward excitation. The mechanistic basis for this appears to be a change in the equilibrium potential of GABA-evoked current. These results emphasize that environmental conditions can have substantial effects on the function of a key neurotransmitter in the central nervous system.


Subject(s)
Circadian Clocks/physiology , Excitatory Postsynaptic Potentials/physiology , Inhibitory Postsynaptic Potentials/physiology , Seasons , Suprachiasmatic Nucleus/metabolism , gamma-Aminobutyric Acid/metabolism , Animals , Male , Mice , Mice, Inbred C57BL , Microscopy, Fluorescence , Patch-Clamp Techniques , Photoperiod , Statistics, Nonparametric
13.
Neuroscientist ; 20(1): 44-55, 2014 Feb.
Article in English | MEDLINE | ID: mdl-23924666

ABSTRACT

More than half of the elderly in today's society suffer from sleep disorders with detrimental effects on brain function, behavior, and social life. A major contribution to the regulation of sleep stems from the circadian system. The central circadian clock located in the suprachiasmatic nucleus of the hypothalamus is like other brain regions subject to age-associated changes. Age affects different levels of the clock machinery from molecular rhythms, intracellular messenger, and membrane properties to neuronal network synchronization. While some of the age-sensitive components of the circadian clock, like ion channels and neurotransmitters, have been described, little is known about the underlying mechanisms. In any case, the result is a reduction in the amplitude of the circadian timing signal produced by the suprachiasmatic nucleus, a weakening in the control of peripheral oscillators and a decrease in amplitude and precision of daily rhythms in physiology and behavior. The distortion in temporal organization is thought to be related to a number of serious health problems and promote neurodegeneration. Understanding the mechanisms underlying age-related deficits in circadian clock function will therefore not only benefit rhythm disorders but also alleviate age-associated diseases aggravated by clock dysfunction.


Subject(s)
Aging/physiology , Circadian Clocks/physiology , Suprachiasmatic Nucleus/physiology , Animals , Humans , Sleep/physiology
14.
J Neurosci ; 32(17): 5891-9, 2012 Apr 25.
Article in English | MEDLINE | ID: mdl-22539850

ABSTRACT

Aging is associated with a deterioration of daily (circadian) rhythms in physiology and behavior. Deficits in the function of the central circadian pacemaker in the suprachiasmatic nucleus (SCN) have been implicated, but the responsible mechanisms have not been clearly delineated. In this report, we characterize the progression of rhythm deterioration in mice to 900 d of age. Longitudinal behavioral and sleep-wake recordings in up to 30-month-old mice showed strong fragmentation of rhythms, starting at the age of 700 d. Patch-clamp recordings in this age group revealed deficits in membrane properties and GABAergic postsynaptic current amplitude. A selective loss of circadian modulation of fast delayed-rectifier and A-type K+ currents was observed. At the tissue level, phase synchrony of SCN neurons was grossly disturbed, with some subpopulations peaking in anti-phase and a reduction in amplitude of the overall multiunit activity rhythm. We propose that aberrant SCN rhythmicity in old animals--with electrophysiological arrhythmia at the single-cell level and phase desynchronization at the network level--can account for defective circadian function with aging.


Subject(s)
Aging , Circadian Rhythm/physiology , Neurons/physiology , Periodicity , Suprachiasmatic Nucleus/cytology , Action Potentials/drug effects , Action Potentials/physiology , Age Factors , Analysis of Variance , Animals , Biophysics , Electric Stimulation , Electroencephalography , Electromyography , In Vitro Techniques , Male , Mice , Mice, Inbred C57BL , Motor Activity/drug effects , Motor Activity/physiology , Neurons/drug effects , Patch-Clamp Techniques , Potassium Channel Blockers/pharmacology , Sleep/physiology , Sleep Deprivation , Tetraethylammonium/pharmacology , Wakefulness/physiology
15.
J Ethnopharmacol ; 120(3): 360-5, 2008 Dec 08.
Article in English | MEDLINE | ID: mdl-18852037

ABSTRACT

AIM OF THE STUDY: Many biological actions of Pimpinella anisum L. (Ainse), including antiepileptic activity have been demonstrated; however, there is no data concerning its precise cellular mechanisms of action. We determined whether the fruit essential oil of anise affect the bioelectrical activity of snail neurons in control condition or after pentylenetetrazol (PTZ) induced epileptic activity. MATERIALS AND METHODS: Intracellular recordings were made under the current clamp condition and the effects of anise oil (0.01% or 0.05%) alone or in combination with PTZ were assessed on the firing pattern, action potential configuration and postspike potentials. RESULTS: Anise oil changed the firing pattern from regular tonic discharge to irregular and then to bursting in intact cells or resulted in the robustness of the burst firing and the steepness of the paroxysmal shift induced by PTZ treatment. It also significantly increased the firing frequency and decreased both the after-hyperpolarization potential (AHP) following single action potential and the post-pulse AHP. CONCLUSIONS: Likely candidate cellular mechanisms underlying the hyperexcitability produced by anise oil include enhancement of Ca(2+) channels activity or inhibition of voltage and/or Ca(2+) dependent K(+) channels activity underlying AHPs. These finding indicates that a certain caution is needed when Pimpinella anisum is used for treating patients suffering from epilepsy.


Subject(s)
Helix, Snails/drug effects , Neurons/drug effects , Oils, Volatile/pharmacology , Pimpinella/chemistry , Action Potentials/drug effects , Animals , Anticonvulsants/pharmacology , Calcium Channels , Convulsants/administration & dosage , Disease Models, Animal , Epilepsy/chemically induced , Epilepsy/drug therapy , Epilepsy/physiopathology , Neurons/physiology , Patch-Clamp Techniques , Pentylenetetrazole/administration & dosage , Pentylenetetrazole/toxicity , Phytotherapy/methods , Plant Extracts/isolation & purification , Plant Extracts/pharmacology
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