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1.
Cryst Growth Des ; 23(7): 4872-4882, 2023 Jul 05.
Article in English | MEDLINE | ID: mdl-37426546

ABSTRACT

Calcium carbonate minerals, such as aragonite and calcite, are widespread in biomineral skeletons, shells, exoskeletons, and more. With rapidly increasing pCO2 levels linked to anthropogenic climate change, carbonate minerals face the threat of dissolution, especially in an acidifying ocean. Given the right conditions, Ca-Mg carbonates (especially disordered dolomite and dolomite) are alternative minerals for organisms to utilize, with the added benefit of being harder and more resistant to dissolution. Ca-Mg carbonate also holds greater potential for carbon sequestration due to both Ca and Mg cations being available to bond with the carbonate group (CO32-). However, Mg-bearing carbonates are relatively rare biominerals because the high kinetic energy barrier for the dehydration of the Mg2+-water complex severely restricts Mg incorporation in carbonates at Earth surface conditions. This work presents the first overview of the effects of the physiochemical properties of amino acids and chitins on the mineralogy, composition, and morphology of Ca-Mg carbonates in solutions and on solid surfaces. We discovered that acidic, negatively charged, hydrophilic amino acids (aspartic and glutamic) and chitins could induce the precipitation of high-magnesium calcite (HMC) and disordered dolomite in solution and on solid surfaces with these adsorbed biosubstrates via in vitro experiments. Thus, we expect that acidic amino acids and chitins are among the controlling factors in biomineralization used in different combinations to control the mineral phases, compositions, and morphologies of Ca-Mg carbonate biomineral crystals.

2.
Geobiology ; 21(4): 520-533, 2023 07.
Article in English | MEDLINE | ID: mdl-36849877

ABSTRACT

Non-crystalline silica mineraloids are essential to life on Earth as they provide architectural structure to dominant primary producers, such as plants and phytoplankton, as well as to protists and sponges. Due to the difficulty in characterizing and quantifying the structure of highly disordered X-ray amorphous silica, relatively little has been done to understand the mineralogy of biogenic silica and how this may impact the material properties of biogenic silica, such as hardness and strength, or how biosilica might be identified and differentiated from its inorganic geological counterparts. Typically, geologically formed opal-A and hyalite opal-AN are regarded as analogs to biogenic silica, however, some spectroscopic and imaging studies suggest that this might not be a reasonable assumption. In this study, we use a variety of techniques (X-ray diffraction, Raman spectroscopy, and scanning electron microscopy) to compare differences in structural disorder and bonding environments of geologically formed hydrous silicas (Opal-A, hyalite, geyserite) and silica glass versus biogenic silicas from an array of organisms. Our results indicate differences in the levels of structural disorder and the Raman-observed bonding environments of the SiO2 network modes (D1 mode) and the Q-species modes (~1015 cm-1 ) between varieties of biogenic silicas and geologically formed silicas, which aligns with previous studies that suggest fundamental differences between biogenic and geologically formed silica. Biosilicas also differ structurally from one another by species of organism. Our mineralogical approach to characterizing biosilicas and differentiating them from other silicas may be expanded to future diagenesis studies, and potentially applied to astrobiology studies of Earth and other planets.


Subject(s)
Silicon Dioxide , Spectrum Analysis, Raman , Silicon Dioxide/chemistry , Microscopy, Electron, Scanning , Spectrum Analysis, Raman/methods , Plants , X-Ray Diffraction
3.
ACS Omega ; 7(1): 281-292, 2022 Jan 11.
Article in English | MEDLINE | ID: mdl-35036699

ABSTRACT

How dolomite [CaMg(CO3)2] forms is still underdetermined, despite over a century of efforts. Challenges to synthesizing dolomite at low temperatures have hindered our understanding of sedimentary dolomite formation. Unlike calcium, magnesium's high affinity toward water results in kinetic barriers from hydration shells that prevent anhydrous Ca-Mg carbonate growth. Previous synthesis studies show that adding low-dielectric-constant materials, such as dioxane, dissolved sulfide, and dissolved silica, can catalyze the formation of disordered dolomite. Also, polar hydrophilic amino acids and polysaccharides, which are very common in biomineralizing organisms, could have a positive role in stimulating Mg-rich carbonate precipitation. Here, we show that disordered dolomite and high-magnesium calcite can be precipitated at room temperature by partially replacing water with ethanol (which has a lower dielectric constant) and bypassing the hydration barrier. Increasing the ethanol volume percentage of ethanol results in higher Mg incorporation into the calcite structure. When the ethanol volume percentage increases to 75 vol %, disordered dolomite (>60 mol % MgCO3) can rapidly precipitate from a solution with [Mg2+] and [Ca2+] mimicking seawater. Thus, our results suggest that the hydration barrier is the critical kinetic inhibitor to primary dolomite precipitation. Ethanol synthesis experiments may provide insights into other materials that share similar properties to promote high-Mg calcite precipitation in sedimentary and biomineral environments.

4.
J Geophys Res Oceans ; 125(10): e2020JC016747, 2020 Oct.
Article in English | MEDLINE | ID: mdl-33282615

ABSTRACT

In the marine environment, the reactive oxygen species (ROS) superoxide is produced through a diverse array of light-dependent and light-independent reactions, the latter of which is thought to be primarily controlled by microorganisms. Marine superoxide production influences organic matter remineralization, metal redox cycling, and dissolved oxygen concentrations, yet the relative contributions of different sources to total superoxide production remain poorly constrained. Here we investigate the production, steady-state concentration, and particle-associated nature of light-independent superoxide in productive waters off the northeast coast of North America. We find exceptionally high levels of light-independent superoxide in the marine water column, with concentrations ranging from 10 pM to in excess of 2,000 pM. The highest superoxide concentrations were particle associated in surface seawater and in aphotic seawater collected meters off the seafloor. Filtration of seawater overlying the continental shelf lowered the light-independent, steady-state superoxide concentration by an average of 84%. We identify eukaryotic phytoplankton as the dominant particle-associated source of superoxide to these coastal waters. We contrast these measurements with those collected at an off-shelf station, where superoxide concentrations did not exceed 100 pM, and particles account for an average of 40% of the steady-state superoxide concentration. This study demonstrates the primary role of particles in the production of superoxide in seawater overlying the continental shelf and highlights the importance of light-independent, dissolved-phase reactions in marine ROS production.

5.
E-Cienc. inf ; 10(2)dic. 2020.
Article in Spanish | LILACS, SaludCR | ID: biblio-1384737

ABSTRACT

Resumen: Las bibliotecas públicas no son ajenas al constante cambio de su entorno, siguen tendencias tecnológicas y aplican modelos adecuados a las necesidades de sus usuarios. Derivando de esta idea, este trabajo tiene como objetivo contextualizar de manera breve la época actual en el ámbito de ciencia, tecnología, sociedad y economía incluyendo la crisis sanitaria de la COVID-19, así también, se expone las tendencias que se aplican en la gestión bibliotecaria y qué modelos se están adoptando en el ámbito bibliotecario. Para ello, se realizó una indagación documental de diversas instituciones y autores especializados sobre el tema en los últimos años. Se indica que varias bibliotecas a nivel mundial están diversificando sus servicios y productos con apoyo de las herramientas tecnológicas y han demostrado ser flexibles ante situaciones complicadas. Se concluye que el contexto influye en el desarrollo de programas de la biblioteca, asimismo, las tendencias y modelos están fuertemente relacionadas a la tecnología, más aún, cuando la crisis sanitaria ha ocasionado una aceleración de la virtualización de la gestión bibliotecaria. Además, se persigue la idea de implementar espacios de aprendizaje, creación, participación, inspiración, de encuentro social, de información fiable y de empoderamiento ciudadano, tanto en el ámbito físico como virtual.


Abstract: Public libraries are not unaware of the constant change in their environment, they follow technological trends and apply models appropriate to the needs of their users. Based on this concept, this work aims to briefly contextualize the current era in the field of science, technology, society and economy, including the health crisis of COVID-19, as well as the trends that are applied in the library management and what models are being adopted in the library field. For this, a documentary investigation of various institutions and specialized authors on the subject in recent years was carried out. It is indicated that several libraries worldwide are diversifying their services and products with the support of technological tools and have proven to be flexible in difficult situations. It is concluded that the context influences the development of library programs. Likewise, trends and models are strongly related to technology, even more so when the health crisis has caused an acceleration of the virtualization of library management. In addition, the idea of ​​implementing spaces for learning, creation, participation, inspiration, social encounters, reliable information and citizen empowerment is pursued, both physically and virtual.


Subject(s)
Cities , Educational and Promotional Materials , Libraries , Spain , Computer Literacy
6.
Nat Ecol Evol ; 4(11): 1531-1538, 2020 11.
Article in English | MEDLINE | ID: mdl-32868916

ABSTRACT

Identifying how past environmental conditions shaped the evolution of corals and their skeletal traits provides a framework for predicting their persistence and that of their non-calcifying relatives under impending global warming and ocean acidification. Here we show that ocean geochemistry, particularly aragonite-calcite seas, drives patterns of morphological evolution in anthozoans (corals, sea anemones) by examining skeletal traits in the context of a robust, time-calibrated phylogeny. The lability of skeletal composition among octocorals suggests a greater ability to adapt to changes in ocean chemistry compared with the homogeneity of the aragonitic skeleton of scleractinian corals. Pulses of diversification in anthozoans follow mass extinctions and reef crises, with sea anemones and proteinaceous corals filling empty niches as tropical reef builders went extinct. Changing environmental conditions will likely diminish aragonitic reef-building scleractinians, but the evolutionary history of the Anthozoa suggests other groups will persist and diversify in their wake.


Subject(s)
Anthozoa , Animals , Hydrogen-Ion Concentration , Oceans and Seas , Seawater , Skeleton
7.
Geobiology ; 18(5): 594-605, 2020 09.
Article in English | MEDLINE | ID: mdl-32336020

ABSTRACT

Metal sulfide minerals, including mercury sulfides (HgS), are widespread in hydrothermal vent systems where sulfur-oxidizing microbes are prevalent. Questions remain as to the impact of mineral composition and structure on sulfur-oxidizing microbial populations at deep-sea hydrothermal vents, including the possible role of microbial activity in remobilizing elemental Hg from HgS. In the present study, metal sulfides varying in metal composition, structure, and surface area were incubated for 13 days on and near a diffuse-flow hydrothermal vent at 9°50'N on the East Pacific Rise. Upon retrieval, incubated minerals were examined by scanning electron microscopy with energy-dispersive X-ray spectroscopy (SEM-EDS), X-ray diffraction (XRD), and epifluorescence microscopy (EFM). DNA was extracted from mineral samples, and the 16S ribosomal RNA gene sequenced to characterize colonizing microbes. Sulfur-oxidizing genera common to newly exposed surfaces (Sulfurimonas, Sulfurovum, and Arcobacter) were present on all samples. Differences in their relative abundance between and within incubation sites point to constraining effects of the immediate environment and the minerals themselves. Greater variability in colonizing community composition on off-vent samples suggests that the bioavailability of mineral-derived sulfide (as influenced by surface area, crystal structure, and reactivity) exerted greater control on microbial colonization in the ambient environment than in the vent environment, where dissolved sulfide is more abundant. The availability of mineral-derived sulfide as an electron donor may thus be a key control on the activity and proliferation of deep-sea chemosynthetic communities, and this interpretation supports the potential for microbial dissolution of HgS at hydrothermal vents.


Subject(s)
Hydrothermal Vents , Metals , Minerals , Phylogeny , RNA, Ribosomal, 16S , Seawater , Sulfides
8.
Anal Chem ; 90(21): 12559-12566, 2018 11 06.
Article in English | MEDLINE | ID: mdl-30277756

ABSTRACT

Identifying and mapping the wide range of sulfur species within complex matrices presents a challenge for understanding the distribution of these important biomolecules within environmental and biological systems. Here, we present a coupled micro X-ray fluorescence (µXRF) and X-ray absorption near-edge structure (XANES) spectroscopy method for determining the presence of specific sulfur species in coral tissues and skeletons at high spatial resolution. By using multiple energy stacks and principal component analysis of a large spectral database, we were able to more accurately identify sulfur species components and distinguish different species and distributions of sulfur formerly unresolved by previous studies. Specifically, coral tissues were dominated by more reduced sulfur species, such as glutathione disulfide, cysteine, and sulfoxide, as well as organic sulfate as represented by chondroitin sulfate. Sulfoxide distributions were visually correlated with the presence of zooxanthellae endosymbionts. Coral skeletons were composed primarily of carbonate-associated sulfate (CAS) along with minor contributions from organic sulfate and a separate inorganic sulfate likely in the form of adsorbed sulfate. This coupled XRF-XANES approach allows for a more accurate and informative view of sulfur within biological systems in situ and holds great promise for pairing with other techniques to allow for a more encompassing understanding of elemental distributions within the environment.


Subject(s)
Anthozoa/chemistry , Cysteine/analysis , Glutathione Disulfide/analysis , Sulfates/analysis , Animals , Chondroitin Sulfates/analysis , Spectrometry, X-Ray Emission , X-Ray Absorption Spectroscopy
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