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1.
Microorganisms ; 11(4)2023 Apr 12.
Article in English | MEDLINE | ID: mdl-37110428

ABSTRACT

Rosenbergiella bacteria have been previously isolated predominantly from floral nectar and identified in metagenomic screenings as associated with bees. Here, we isolated three Rosenbergiella strains from the robust Australian stingless bee Tetragonula carbonaria sharing over 99.4% sequence similarity with Rosenbergiella strains isolated from floral nectar. The three Rosenbergiella strains (D21B, D08K, D15G) from T. carbonaria exhibited near-identical 16S rDNA. The genome of strain D21B was sequenced; its draft genome contains 3,294,717 bp, with a GC content of 47.38%. Genome annotation revealed 3236 protein-coding genes. The genome of D21B differs sufficiently from the closest related strain, Rosenbergiella epipactidis 2.1A, to constitute a new species. In contrast to R. epipactidis 2.1A, strain D21B produces the volatile 2-phenylethanol. The D21B genome contains a polyketide/non-ribosomal peptide gene cluster not present in any other Rosenbergiella draft genomes. Moreover, the Rosenbergiella strains isolated from T. carbonaria grew in a minimal medium without thiamine, but R. epipactidis 2.1A was thiamine-dependent. Strain D21B was named R. meliponini D21B, reflecting its origin from stingless bees. Rosenbergiella strains may contribute to the fitness of T. carbonaria.

2.
Adv Exp Med Biol ; 851: 319-39, 2015.
Article in English | MEDLINE | ID: mdl-26002741

ABSTRACT

Cytochrome P450cin (P450cin) (CYP176A1) is a bacterial P450 enzyme that catalyses the enantiospecific hydroxylation of 1,8-cineole to (1R)-6ß-hydroxycineole when reconstituted with its natural reduction-oxidation (redox) partner cindoxin, E. coli flavodoxin reductase, and NADPH as a source of electrons. This catalytic system has become a useful tool in the study of P450s as not only can large quantities of P450cin be prepared and rates of oxidation up to 1,500 min(-1) achieved, but it also displays a number of unusual characteristics. These include an asparagine residue in P450cin that has been found in place of the usual conserved threonine residue observed in most P450s. In general, this conserved threonine controls oxygen activation to create the potent ferryl (Fe(IV=O) porphyrin cation radical required for substrate oxidation. Another atypical characteristic of P450cin is that it utilises an FMN-containing redoxin (cindoxin) rather than a ferridoxin as is usually observed with other bacterial P450s (e.g. P450cam). This chapter will review what is currently known about P450cin and how this enzyme has provided a greater understanding of P450s in general.


Subject(s)
Cytochrome P-450 Enzyme System/metabolism , Escherichia coli Proteins/metabolism , Escherichia coli/enzymology , Cyclohexanols/metabolism , Cytochrome P-450 Enzyme System/genetics , Escherichia coli/genetics , Escherichia coli Proteins/genetics , Eucalyptol , Hydroxylation , Monoterpenes/metabolism , NADH, NADPH Oxidoreductases/genetics , NADH, NADPH Oxidoreductases/metabolism , NADP/genetics , NADP/metabolism , Oxidation-Reduction
3.
Biochim Biophys Acta ; 1834(3): 688-96, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23305928

ABSTRACT

P450(cin) (CYP176A) is a rare bacterial P450 in that contains an asparagine (Asn242) instead of the conserved threonine that almost all other P450s possess that directs oxygen activation by the heme prosthetic group. However, P450(cin) does have the neighbouring, conserved acid (Asp241) that is thought to be involved indirectly in the protonation of the dioxygen and affect the lifetime of the ferric-peroxo species produced during oxygen activation. In this study, the P450(cin) D241N mutant has been produced and found to be analogous to the P450(cam) D251N mutant. P450(cin) catalyses the hydroxylation of cineole to give only (1R)-6ß-hydroxycineole and is well coupled (NADPH consumed: product produced). The P450(cin) D241N mutant also hydroxylated cineole to produce only (1R)-6ß-hydroxycineole, was moderately well coupled (31±3%) but a significant reduction in the rate of the reaction (2% as compared to wild type) was observed. Catalytic oxidation of a variety of substrates by D241N P450(cin) were used to examine if typical reactions ascribed to the ferric-peroxo species increased as this intermediate is known to be more persistent in the P450(cam) D251N mutant. However, little change was observed in the product profiles of each of these substrates between wild type and mutant enzymes and no products consistent with chemistry of the ferric-peroxo species were observed to increase.


Subject(s)
Cytochrome P-450 Enzyme System/chemistry , Cytochrome P-450 Enzyme System/metabolism , Mutant Proteins/chemistry , Mutant Proteins/metabolism , Amino Acid Sequence , Amino Acid Substitution , Asparagine/chemistry , Asparagine/genetics , Asparagine/metabolism , Aspartic Acid/chemistry , Aspartic Acid/genetics , Aspartic Acid/metabolism , Biocatalysis , Catalytic Domain/genetics , Cyclohexanols/chemistry , Cyclohexanols/metabolism , Cytochrome P-450 Enzyme System/genetics , Eucalyptol , Hydroxylation , Models, Chemical , Molecular Sequence Data , Molecular Structure , Monoterpenes/chemistry , Monoterpenes/metabolism , Sequence Homology, Amino Acid
4.
Inorg Chem ; 52(3): 1650-7, 2013 Feb 04.
Article in English | MEDLINE | ID: mdl-23324063

ABSTRACT

The new tribasic N(2)S(2) ligand H(3)ttfasbz has been synthesized by condensation of 4-thenoyl 2,2,2-trifluoroacetone and S-benzyl dithiocarbazate. On complexation with copper(II) acetate, spontaneous oxidation to the Cu(III) oxidation state is observed, and the complex [Cu(ttfasbz)] has been isolated and characterized structurally. Reduction to the EPR active Cu(II) analogue has been achieved chemically and also electrochemically, and in both cases, the process is totally reversible. The Cu(III/II) redox potential of the complex is remarkably low and similar to that of the ferrocenium/ferrocene couple. Further reduction to the formally monovalent (d(10)) dianion [Cu(I)(ttfasbz)](2-) may be achieved electrochemically. Computational chemistry demonstrates that the three redox states [Cu(ttfasbz)], [Cu(ttfasbz)](-), and [Cu(ttfasbz)](2-) are truly Cu(III), Cu(II), and Cu(I) complexes, respectively, and the potentially noninnocent ligand does not undergo any redox reactions.


Subject(s)
Copper/chemistry , Hydrazines/chemistry , Organometallic Compounds/chemistry , Schiff Bases/chemistry , Sulfhydryl Compounds/chemistry , Crystallography, X-Ray , Ligands , Models, Molecular , Molecular Structure , Organometallic Compounds/chemical synthesis , Oxidation-Reduction , Quantum Theory
5.
Arch Biochem Biophys ; 507(1): 154-62, 2011 Mar 01.
Article in English | MEDLINE | ID: mdl-20851096

ABSTRACT

A conserved threonine found in the majority of cytochromes P450 (P450s) has been implicated in the activation of dioxygen during the catalytic cycle. P450(cin) (CYP176A) has been found to be an exception to this paradigm, where the conserved threonine has been replaced with an asparagine. Prior studies with a P450(cin) N242A mutant established that the Asn-242 was not a functional replacement for the conserved threonine but was essential for the regio- and stereocontrol of the oxidation of cineole. To explore further how P450(cin) controls the activation of the dioxygen in the absence of the conserved threonine, two concurrent lines of investigation were followed. Modification of P450(cin) indicated that the Thr-243 was not involved in controlling the protonation of the hydroperoxy species. In addition, the N242T mutant did not enhance the rate and/or efficiency of catalytic turnover of cineole by P450(cin). In parallel experiments, the substrate cineole was modified by removing the ethereal oxygen to produce camphane or 2,2-dimethylbicyclo[2.2.2]octane (cinane). An analogous experiment with P450(EryF) showed that a hydroxyl group on the substrate was vital, and in its absence catalytic turnover was effectively abolished. Catalytic turnover of P450(cin) with either of these alternative substrates (camphane or cinane) revealed that in the absence of the ethereal oxygen there was still a significant amount of coupling of the NADPH-reducing equivalents to the formation of oxidised product. Again the substrate itself was not found to be important in controlling oxygen activation, in contrast to P450(EryF), but was shown to be essential for regio- and stereoselective substrate oxidation. Thus, it still remains unclear how dioxygen activation in the catalytic turnover of cineole by P450(cin) is controlled.


Subject(s)
Citrobacter/enzymology , Cyclohexanols/chemistry , Cyclohexanols/metabolism , Cytochrome P-450 Enzyme System/genetics , Cytochrome P-450 Enzyme System/metabolism , Monoterpenes/chemistry , Monoterpenes/metabolism , Oxygen/metabolism , Camphanes/chemical synthesis , Camphanes/chemistry , Camphanes/metabolism , Citrobacter/genetics , Cyclohexanols/chemical synthesis , Eucalyptol , Monoterpenes/chemical synthesis , Mutagenesis , Mutation , NADP/metabolism , Substrate Specificity
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