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1.
Nucleic Acids Res ; 43(9): e62, 2015 May 19.
Article in English | MEDLINE | ID: mdl-25820427

ABSTRACT

Mutations in human mitochondrial DNA (mtDNA) can cause mitochondrial disease and have been associated with neurodegenerative disorders, cancer, diabetes and aging. Yet our progress toward delineating the precise contributions of mtDNA mutations to these conditions is impeded by the limited availability of faithful transmitochondrial animal models. Here, we report a method for the isolation of mutations in mouse mtDNA and its implementation for the generation of a collection of over 150 cell lines suitable for the production of transmitochondrial mice. This method is based on the limited mutagenesis of mtDNA by proofreading-deficient DNA-polymerase γ followed by segregation of the resulting highly heteroplasmic mtDNA population by means of intracellular cloning. Among generated cell lines, we identify nine which carry mutations affecting the same amino acid or nucleotide positions as in human disease, including a mutation in the ND4 gene responsible for 70% of Leber Hereditary Optic Neuropathies (LHON). Similar to their human counterparts, cybrids carrying the homoplasmic mouse LHON mutation demonstrated reduced respiration, reduced ATP content and elevated production of mitochondrial reactive oxygen species (ROS). The generated resource of mouse mtDNA mutants will be useful both in modeling human mitochondrial disease and in understanding the mechanisms of ROS production mediated by mutations in mtDNA.


Subject(s)
DNA, Mitochondrial/chemistry , Disease Models, Animal , Mice/genetics , Mitochondrial Diseases/genetics , Mutagenesis , Mutation , Animals , Cell Engineering/methods , Cell Line , Cell Respiration , Humans , Reactive Oxygen Species/metabolism
2.
J Biol Chem ; 288(37): 26594-605, 2013 Sep 13.
Article in English | MEDLINE | ID: mdl-23884459

ABSTRACT

Multiple lines of evidence support the notion that DNA ligase III (LIG3), the only DNA ligase found in mitochondria, is essential for viability in both whole organisms and in cultured cells. Previous attempts to generate cells devoid of mitochondrial DNA ligase failed. Here, we report, for the first time, the derivation of viable LIG3-deficient mouse embryonic fibroblasts. These cells lack mtDNA and are auxotrophic for uridine and pyruvate, which may explain the apparent lethality of the Lig3 knock-out observed in cultured cells in previous studies. Cells with severely reduced expression of LIG3 maintain normal mtDNA copy number and respiration but show reduced viability in the face of alkylating and oxidative damage, increased mtDNA degradation in response to oxidative damage, and slow recovery from mtDNA depletion. Our findings clarify the cellular role of LIG3 and establish that the loss of viability in LIG3-deficient cells is conditional and secondary to the ρ(0) phenotype.


Subject(s)
DNA Ligases/metabolism , DNA, Mitochondrial/genetics , Mitochondria/enzymology , Mitochondrial Proteins/metabolism , Alleles , Animals , Crosses, Genetic , DNA Damage , DNA Ligase ATP , DNA Ligases/genetics , DNA Repair , Fibroblasts/metabolism , Genotype , HeLa Cells , Humans , Mice , Microscopy, Confocal , Mitochondrial Proteins/genetics , Oligonucleotides/genetics , Oxidative Stress , Phenotype , Poly-ADP-Ribose Binding Proteins , Xenopus Proteins
3.
J Virol ; 80(6): 2784-96, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16501087

ABSTRACT

Venezuelan equine encephalitis virus (VEEV) is an important, naturally emerging zoonotic pathogen. Recent outbreaks in Venezuela and Colombia in 1995, involving an estimated 100,000 human cases, indicate that VEEV still poses a serious public health threat. To develop a safe, efficient vaccine that protects against disease resulting from VEEV infection, we generated chimeric Sindbis (SIN) viruses expressing structural proteins of different strains of VEEV and analyzed their replication in vitro and in vivo, as well as the characteristics of the induced immune responses. None of the chimeric SIN/VEE viruses caused any detectable disease in adult mice after either intracerebral (i.c.) or subcutaneous (s.c.) inoculation, and all chimeras were more attenuated than the vaccine strain, VEEV TC83, in 6-day-old mice after i.c. infection. All vaccinated mice were protected against lethal encephalitis following i.c., s.c., or intranasal (i.n.) challenge with the virulent VEEV ZPC738 strain (ZPC738). In spite of the absence of clinical encephalitis in vaccinated mice challenged with ZPC738 via i.n. or i.c. route, we regularly detected high levels of infectious challenge virus in the central nervous system (CNS). However, infectious virus was undetectable in the brains of all immunized animals at 28 days after challenge. Hamsters vaccinated with chimeric SIN/VEE viruses were also protected against s.c. challenge with ZPC738. Taken together, our findings suggest that these chimeric SIN/VEE viruses are safe and efficacious in adult mice and hamsters and are potentially useful as VEEV vaccines. In addition, immunized animals provide a useful model for studying the mechanisms of the anti-VEEV neuroinflammatory response, leading to the reduction of viral titers in the CNS and survival of animals.


Subject(s)
Brain/virology , Encephalitis Virus, Venezuelan Equine/genetics , Encephalitis Virus, Venezuelan Equine/immunology , Encephalomyelitis, Venezuelan Equine/prevention & control , Recombination, Genetic , Sindbis Virus/genetics , Viral Vaccines/administration & dosage , Virus Replication , Animals , Brain/pathology , Cricetinae , DNA Replication , Disease Models, Animal , Encephalitis Virus, Venezuelan Equine/metabolism , Encephalomyelitis, Venezuelan Equine/immunology , Encephalomyelitis, Venezuelan Equine/pathology , Encephalomyelitis, Venezuelan Equine/virology , Female , Humans , Male , Mesocricetus , Mice , Sindbis Virus/immunology , Sindbis Virus/metabolism , Vaccination , Vaccines, Attenuated/administration & dosage , Vaccines, Attenuated/genetics , Viral Structural Proteins/genetics , Viral Structural Proteins/immunology , Viral Structural Proteins/metabolism , Viral Vaccines/genetics
4.
J Virol ; 77(17): 9278-86, 2003 Sep.
Article in English | MEDLINE | ID: mdl-12915543

ABSTRACT

Venezuelan equine encephalitis virus (VEEV) is an important, naturally emerging zoonotic virus. VEEV was a significant human and equine pathogen for much of the past century, and recent outbreaks in Venezuela and Colombia (1995), with about 100,000 human cases, indicate that this virus still poses a serious public health threat. The live attenuated TC-83 vaccine strain of VEEV was developed in the 1960s using a traditional approach of serial passaging in tissue culture of the virulent Trinidad donkey (TrD) strain. This vaccine presents several problems, including adverse, sometimes severe reactions in many human vaccinees. The TC-83 strain also retains residual murine virulence and is lethal for suckling mice after intracerebral (i.c.) or subcutaneous (s.c.) inoculation. To overcome these negative effects, we developed a recombinant, chimeric Sindbis/VEE virus (SIN-83) that is more highly attenuated. The genome of this virus encoded the replicative enzymes and the cis-acting RNA elements derived from Sindbis virus (SINV), one of the least human-pathogenic alphaviruses. The structural proteins were derived from VEEV TC-83. The SIN-83 virus, which contained an additional adaptive mutation in the nsP2 gene, replicated efficiently in common cell lines and did not cause detectable disease in adult or suckling mice after either i.c. or s.c. inoculation. However, SIN-83-vaccinated mice were efficiently protected against challenge with pathogenic strains of VEEV. Our findings suggest that the use of the SINV genome as a vector for expression of structural proteins derived from more pathogenic, encephalitic alphaviruses is a promising strategy for alphavirus vaccine development.


Subject(s)
Encephalitis Virus, Venezuelan Equine/genetics , Encephalitis Virus, Venezuelan Equine/immunology , Sindbis Virus/genetics , Sindbis Virus/immunology , Animals , Base Sequence , Cell Line , Chlorocebus aethiops , Cricetinae , Encephalitis Virus, Venezuelan Equine/pathogenicity , Encephalitis Virus, Venezuelan Equine/physiology , Encephalomyelitis, Venezuelan Equine/immunology , Encephalomyelitis, Venezuelan Equine/prevention & control , Female , Male , Mice , Molecular Sequence Data , RNA/genetics , RNA, Viral/genetics , Recombination, Genetic , Sindbis Virus/pathogenicity , Sindbis Virus/physiology , Vaccines, Attenuated/genetics , Vaccines, Synthetic/genetics , Vero Cells , Viral Vaccines/genetics , Virulence , Virus Replication
5.
J Virol ; 76(22): 11254-64, 2002 Nov.
Article in English | MEDLINE | ID: mdl-12388685

ABSTRACT

Alphaviruses productively infect a variety of vertebrate and insect cell lines. In vertebrate cells, Sindbis virus redirects cellular processes to meet the needs of virus propagation. At the same time, cells respond to virus replication by downregulating virus growth and preventing dissemination of the infection. The balance between these two mechanisms determines the outcome of infection at the cellular and organismal levels. In this report, we demonstrate that a viral nonstructural protein, nsP2, is a significant regulator of Sindbis virus-host cell interactions. This protein not only is a component of the replicative enzyme complex required for replication and transcription of viral RNAs but also plays a role in suppressing the antiviral response in Sindbis virus-infected cells. nsP2 most likely acts by decreasing interferon (IFN) production and minimizing virus visibility. Infection of murine cells with Sindbis virus expressing a mutant nsP2 leads to higher levels of IFN secretion and the activation of 170 cellular genes that are induced by IFN and/or virus replication. Secreted IFN protects naive cells against Sindbis virus infection and also stops viral replication in productively infected cells. Mutations in nsP2 can also attenuate Sindbis virus cytopathogenicity. Such mutants can persist in mammalian cells with defects in the alpha/beta IFN (IFN-alpha/beta) system or when IFN activity is neutralized by anti-IFN-alpha/beta antibodies. These findings provide new insight into the alphavirus-host cell interaction and have implications for the development of improved alphavirus expression systems with better antigen-presenting potential.


Subject(s)
Alphavirus Infections/immunology , Alphavirus Infections/physiopathology , Cysteine Endopeptidases/metabolism , Interferon-alpha/metabolism , Interferon-beta/metabolism , Sindbis Virus/pathogenicity , Alphavirus Infections/virology , Animals , Cell Line , Cricetinae , Cysteine Endopeptidases/genetics , Mice , Mutation , Oligonucleotide Array Sequence Analysis , RNA, Viral/metabolism , Sindbis Virus/genetics , Transcription, Genetic , Viral Proteins/genetics , Viral Proteins/metabolism , Virulence , Virus Replication
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