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1.
J Infect ; 71(3): 326-37, 2015 Sep.
Article in English | MEDLINE | ID: mdl-25982025

ABSTRACT

OBJECTIVES: Outer membrane vesicle (OMV) vaccines are used against outbreaks of capsular group B Neisseria meningitidis (MenB) caused by strains expressing particular PorA outer membrane proteins (OMPs). Ferric enterobactin receptor (FetA) is another variable OMP that induces type-specific bactericidal antibodies, and the combination of judiciously chosen PorA and FetA variants in vaccine formulations is a potential approach to broaden protection of such vaccines. METHODS: The OMV vaccine MenPF-1 was generated by genetically modifying N. meningitidis strain 44/76 to constitutively express FetA. Three doses of 25 µg or 50 µg of MenPF-1 were delivered intra-muscularly to 52 healthy adults. RESULTS: MenPF-1 was safe and well tolerated. Immunogenicity was measured by serum bactericidal assay (SBA) against wild-type and isogenic mutant strains. After 3 doses, the proportion of volunteers with SBA titres ≥1:4 (the putative protective titre) was 98% for the wild-type strain, and 77% for the strain 44/76 FetA(on)PorA(off) compared to 51% in the strain 44/76 FetA(off)PorA(off), demonstrating that vaccination with MenPF-1 simultaneously induced FetA and PorA bactericidal antibodies. CONCLUSION: This study provides a proof-of-concept for generating bactericidal antibodies against FetA after OMV vaccination in humans. Prevalence-based choice of PorA and FetA types can be used to formulate a vaccine for broad protection against MenB disease.


Subject(s)
Bacterial Outer Membrane Proteins/genetics , Carrier Proteins/genetics , Carrier Proteins/immunology , Meningococcal Vaccines/administration & dosage , Neisseria meningitidis, Serogroup B/genetics , Neisseria meningitidis, Serogroup B/immunology , Porins/immunology , Receptors, Cell Surface/genetics , Receptors, Cell Surface/immunology , Adolescent , Adult , Antibodies, Bacterial/blood , Bacterial Outer Membrane Proteins/administration & dosage , Bacterial Outer Membrane Proteins/immunology , Carrier Proteins/administration & dosage , Female , Humans , Male , Meningococcal Vaccines/adverse effects , Meningococcal Vaccines/immunology , Middle Aged , Molecular Epidemiology , Porins/genetics , Receptors, Cell Surface/administration & dosage , Serum Bactericidal Antibody Assay , Young Adult
2.
Scand J Immunol ; 62(4): 385-92, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16253126

ABSTRACT

Life-threatening meningitis and septicaemia caused by Neisseria meningitidis are a public health priority, and their prevention by vaccination is a major objective. Meningococcal capsular polysaccharide-based vaccines are effective against the major invasive serogroups, except for serogroup B, the capsule of which mimics human polysaccharides and is poorly immunogenic. An alternative vaccine candidate that has the potential to offer cross-protection against antigenically diverse meningococci is the lipooligosaccharide (LOS). The structurally constrained peptide mimetic, C22, of a bactericidal antibody epitope within LOS was previously shown to elicit cross-reactive antibodies to meningococcal LOS when complexed to NeutrAvidintrade mark as a carrier protein. The immunogenicity of this antigen in H-2(d) (BALB/c) and H-2(k) (C3H/HeN) haplotype mice was further investigated. Anti-LOS immunoglobulin G (IgG) antibody titres increased with the vaccine dose and correlated with the anti-C22 peptide antibody titres in both haplotypes. Antigen-stimulated Th1/Th2 cytokine secretion by splenocytes and antibody isotypes indicated a Th2-type immune response with IgG1 antibodies and a low titre of IgG2b. There was no serum bactericidal activity observed against the meningococcus.


Subject(s)
Lipopolysaccharides/immunology , Molecular Mimicry/immunology , Neisseria meningitidis/immunology , Peptides/immunology , Animals , Antibodies, Monoclonal , Cells, Cultured , Cytokines/metabolism , Dose-Response Relationship, Immunologic , Female , Immunoglobulin G/blood , Mice , Mice, Inbred BALB C , Mice, Inbred C3H , Protein Conformation , Spleen/cytology , Spleen/metabolism
3.
Pharmacogenomics ; 2(3): 273-83, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11535115

ABSTRACT

Meningococcal disease was first recognised and Neisseria meningitidis isolated as the causative agent over 100 years ago, but despite more than a century of research, attempts to eliminate this distressing illness have so far been thwarted. The main problem lies in the fact that N. meningitidis usually exists as a harmless commensal inhabitant of the human nasopharynx, the pathogenic state being the exception rather than the norm. As man is its only host, the meningococcus is uniquely adapted to this ecological niche and has evolved an array of mechanisms for evading clearance by the human immune response. Progress has been made in combating the disease by developing vaccines that target specific pathogenic serogroups of meningococci. However, a fully comprehensive vaccine that protects against all pathogenic strains is still just beyond reach. The publication of the genome sequences of two meningococcal strains, one each from serogroups A and B and the imminent completion of a third illustrates the extent of the problems to be overcome, namely the vast array of genetic mechanisms for the generation of meningococcal diversity. Fortunately, genome studies also provide new hope for solutions to these problems in the potential for a greater understanding of meningococcal pathogenesis and possibilities for the identification of new vaccine candidates. This review describes some of the approaches that are currently being used to exploit the information from meningococcal genome sequences and seeks to identify future prospects for combating meningococcal disease.


Subject(s)
Genome, Bacterial , Meningococcal Infections/prevention & control , Meningococcal Vaccines/immunology , Neisseria meningitidis/genetics , Clinical Trials as Topic , Gene Expression Profiling , Humans , Meningococcal Vaccines/adverse effects , Neisseria meningitidis/immunology , Neisseria meningitidis/pathogenicity , Proteome , Vaccination , Virulence
4.
J Bacteriol ; 183(14): 4317-22, 2001 Jul.
Article in English | MEDLINE | ID: mdl-11418573

ABSTRACT

The GerAA, -AB, and -AC proteins of the Bacillus subtilis spore are required for the germination response to L-alanine as the sole germinant. They are likely to encode the components of the germination apparatus that respond directly to this germinant, mediating the spore's response; multiple homologues of the gerA genes are found in every spore former so far examined. The gerA operon is expressed in the forespore, and the level of expression of the operon appears to be low. The GerA proteins are predicted to be membrane associated. In an attempt to localize GerA proteins, spores of B. subtilis were broken and fractionated to give integument, membrane, and soluble fractions. Using antibodies that detect Ger proteins specifically, as confirmed by the analysis of strains lacking GerA and the related GerB proteins, the GerAA protein and the GerAC+GerBC protein homologues were localized to the membrane fraction of fragmented spores. The spore-specific penicillin-binding protein PBP5*, a marker for the outer forespore membrane, was absent from this fraction. Extraction of spores to remove coat layers did not release the GerAC or AA protein from the spores. Both experimental approaches suggest that GerAA and GerAC proteins are located in the inner spore membrane, which forms a boundary around the cellular compartment of the spore. The results provide support for a model of germination in which, in order to initiate germination, germinant has to permeate the coat and cortex of the spore and bind to a germination receptor located in the inner membrane.


Subject(s)
Bacillus subtilis/chemistry , Bacterial Proteins/analysis , Membrane Proteins , Amino Acid Sequence , Antibodies, Bacterial/immunology , Bacterial Proteins/immunology , Chemical Fractionation , Molecular Sequence Data , Spores, Bacterial
5.
Methods Mol Med ; 66: 1-22, 2001.
Article in English | MEDLINE | ID: mdl-21336743

ABSTRACT

Despite rapid advances in the diagnosis of bacterial infections and the availability of effective antibiotics, meningococcal disease continues to represent a substantial public health problem for most countries (1-4). Disease usually develops rapidly, is notoriously difficult to distinguish from other febrile illnesses, and generally has a high case-fatality rate. The death of an otherwise fit and healthy individual can occur within a very short time from the first appearance of symptoms, those who survive frequently suffer from permanent tissue damage and neurological problems (4,5). Consequently, the development and implementation of effective immunoprophylaxis is a sine qua non for the comprehensive control of meningococcal disease. From an historical perspective, many meningococcal vaccines have been developed and evaluated in clinical trials; unfortunately, no vaccine so far offers comprehensive protection. This overview traces the development of the existing licensed vaccines and examines the prospects of vaccine candidates that are currently under development or subject to clinical evaluation.

6.
Methods Mol Med ; 66: 181-97, 2001.
Article in English | MEDLINE | ID: mdl-21336756

ABSTRACT

Although capsular polysaccharide-based vaccines are effective at reducing the incidence of meningococcal disease caused by serogroups A, C, Y, and W135 (1-3), immunization against serogroup B disease using similar strategies has proven unsuccessful (4,5). The primary reason for this is that the α2,8-linked N-acetylneuraminic acid homopolymer expressed by serogroup B strains is poorly immunogenic in humans (6). Consequently, considerable effort has been devoted towards the development of alternative strategies for vaccination against serogroup B disease. Many of these newer strategies include the use of lipooligosaccharide (LOS) as a protective antigen (7). One of the approaches that we are currently pursuing involves the use of synthetic oligopeptides to stimulate antibody responses that are cross-reactive with LOS antigens expressed by serogroup B Neisseria meningitidis strains. An integral part of these studies has been the application of combinatorial phage-display technology. Described here is an overview of the methods that we have utilized to identify peptide mimics of LOS epitopes.

8.
FEMS Microbiol Lett ; 191(1): 45-50, 2000 Oct 01.
Article in English | MEDLINE | ID: mdl-11004398

ABSTRACT

As an alternative approach towards the development of a meningococcal vaccine, the potential of peptide mimics of lipooligosaccharide (LOS) to elicit cross-reactive immune responses against LOS was investigated. The heptapeptides SMYGSYN and APARQLP were identified by enrichment from a coliphage display library with a LOS-specific monoclonal antibody. Mice immunised with these peptides conjugated to diphtheria toxoid elicited a total IgG response to LOS with geometric mean titres 2-4 times higher compared with non-immunised controls. There was an increase in LOS-specific IgG1 immunoglobulin, whereas specific IgG2a and IgG3 decreased slightly in response to immunisation. The data demonstrated that peptide mimics can elicit immune responses against meningococcal LOS.


Subject(s)
Antibodies, Bacterial/blood , Lipopolysaccharides/immunology , Meningococcal Infections/immunology , Molecular Mimicry , Neisseria meningitidis/immunology , Peptides , Animals , Antibodies, Monoclonal/metabolism , Bacteriophages/genetics , Biosensing Techniques , Enzyme-Linked Immunosorbent Assay , Immunization , Lipopolysaccharides/chemistry , Meningococcal Infections/microbiology , Mice , Mice, Inbred BALB C , Neisseria meningitidis/classification , Peptide Library , Peptides/chemical synthesis , Peptides/chemistry , Peptides/immunology
11.
Vaccine ; 19(9-10): 1159-66, 2000 Dec 08.
Article in English | MEDLINE | ID: mdl-11137252

ABSTRACT

The cellular and antibody responses to type 14 and type 19F Streptococcus pneumoniae capsular polysaccharides (PS) conjugated to CRM(197) were investigated in a mouse model developed for pre-clinical evaluation and quality control of pneumococcal conjugate vaccines. Total IgG antibody and IgG subclasses against PS and the carrier protein for both conjugates were measured in addition to the T cell proliferation and cytokine profiles induced by these conjugates. While unconjugated PS 14 and 19F were at best only weakly immunogenic, both types of conjugate induced strong primary and secondary IgG responses to PS. The responses induced by the two conjugates to the carrier protein were very different; a high level of anti-CRM(197) IgG was induced only by the PS19F conjugate whereas a very weak response was induced by the PS14 conjugate. Interestingly, the IgG subclass distribution was different for the two conjugates; for PS19F conjugate, the IgG response was almost completely of IgG1 subclass with low levels of IgG3 and IgG2a while the response to PS14 conjugate was mainly of the IgG1 and IgG2a subclasses with a low level of IgG3. The anti-CRM(197) IgG subclass distribution was identical with that to the corresponding conjugated PS. Both types of conjugate induced strong T cell proliferation to recall antigens but induced different patterns of cytokine response in immune spleen cells which were indicative of a Th0 response or a mixture of Th1 and Th2 responses with a bias towards Th2 response in PS19F-CRM(197) immunised mice. In conclusion, PS14- and PS19F-CRM(197) conjugates induced different IgG subclass patterns as a result of inducing different patterns of cytokine response to the carrier protein. This indicates that the serotype of PS can modify the Th1/Th2 response to the carrier protein, which has a direct effect and can predict the IgG subclass of the PS response. Finally, we conclude that this model appears suitable for studying the immunogenicity and immune interaction of different components of multivalent pneumococcal conjugate vaccines and may be applicable to their pre-clinical evaluation and quality control.


Subject(s)
Antibodies, Bacterial/biosynthesis , Bacterial Capsules/immunology , Bacterial Proteins/immunology , Diphtheria Toxin/immunology , Immunoglobulin G/classification , Pneumococcal Vaccines/immunology , Streptococcus pneumoniae/immunology , Th1 Cells/immunology , Th2 Cells/immunology , Animals , Cytokines/biosynthesis , Female , Lymphocyte Activation , Mice , Mice, Inbred BALB C , Serotyping , Vaccines, Conjugate/immunology
12.
J Clin Microbiol ; 37(12): 3883-7, 1999 Dec.
Article in English | MEDLINE | ID: mdl-10565901

ABSTRACT

Multilocus sequence typing and antigen gene sequencing were used to investigate an outbreak of meningococcal disease in a university in the United Kingdom. The data obtained showed that five distinct Neisseria meningitidis strains belonging to the ET-37 complex were present in the student population during the outbreak. Three of these strains were not associated with invasive disease, and two distinct strains caused invasive disease, including several fatalities. The initial case of the disease cluster was caused by a strain distinct from that responsible for at least two subsequent cases and two cases remote from the university, which were epidemiologically linked to the outbreak. These observations were consistent with pulsed-field gel electrophoresis data, but the sequence data alone were sufficient to resolve the strains involved in the disease cluster. Interpretation of the nucleotide sequence data was more straightforward than interpretation of the fingerprint patterns, and the sequence data provided information on the genetic differences among the isolates.


Subject(s)
Disease Outbreaks , Meningococcal Infections/epidemiology , Meningococcal Infections/microbiology , Neisseria meningitidis/classification , Sequence Analysis, DNA/methods , Bacterial Outer Membrane Proteins/genetics , Bacterial Typing Techniques , Base Sequence , Carrier Proteins/genetics , Electrophoresis, Gel, Pulsed-Field , Genes, Bacterial , Humans , Iron-Binding Proteins , Molecular Sequence Data , Neisseria meningitidis/genetics , Neisseria meningitidis/isolation & purification , Porins/genetics , Transferrin-Binding Proteins
13.
Clin Diagn Lab Immunol ; 6(6): 838-43, 1999 Nov.
Article in English | MEDLINE | ID: mdl-10548573

ABSTRACT

Lipooligosaccharide (LOS) is a major surface component of the cell walls of Neisseria meningitidis, which is important for its roles in pathogenesis and antigenic variation, as a target for immunological typing, and as a possible vaccine component. Although the structures of many antigenic variants have been determined, routine immunological typing of these molecules remains problematic. Resonant mirror analysis was combined with gene sequencing to characterize two monoclonal antibodies (MAbs) used in typing panels that were raised against the same LOS immunotype, L3,7,9. The two MAbs (MAb 4A8-B2 and MAb 9-2-L379) were of the same immunoglobulin subtype, but while MAb 9-2-L379 was more than a 1,000-fold more sensitive in immunotyping assays of both whole meningococcal cells and purified LOS, MAb 4A8-B2 was more specific for immunotype L3,7,9. The differences in sensitivity were a consequence of MAb 9-2-L379 having a 44-fold-faster association constant than MAb 4A8-B2. Comparison of the amino acid sequences of the variable chains of the MAbs revealed that they had very similar heavy chains (81% amino acid sequence identity) but diverse light chains (54% sequence identity). The differential binding kinetics and specificities observed with these MAbs were probably due to differences in the epitopes recognized, and these were probably a consequence of the different immunization protocols used in their production.


Subject(s)
Antibodies, Monoclonal/genetics , Meningitis, Meningococcal/immunology , Neisseria meningitidis/immunology , Amino Acid Sequence , Animals , Antibodies, Monoclonal/immunology , Binding, Competitive/immunology , Biosensing Techniques , Carbohydrate Sequence , Carbohydrates/chemistry , Carbohydrates/immunology , Cross Reactions , Enzyme-Linked Immunosorbent Assay , Immunization , Immunoglobulin Variable Region/genetics , Immunoglobulin Variable Region/immunology , Kinetics , Mice , Molecular Sequence Data , Sequence Analysis, DNA , Tetanus Toxoid/immunology , Tetanus Toxoid/pharmacology
15.
J Mol Biol ; 293(1): 81-91, 1999 Oct 15.
Article in English | MEDLINE | ID: mdl-10512717

ABSTRACT

Many pathogens present highly variable surface proteins to their host as a means of evading immune responses. The structure of a peptide antigen corresponding to the subtype P1.7 variant of the porin PorA from the human pathogen Neisseria meningitidis was determined by solution of the X-ray crystal structure of the ternary complex of the peptide (ANGGASGQVK) in complex with a Fab fragment and a domain from streptococcal protein G to 1.95 A resolution. The peptide adopted a beta-hairpin structure with a type I beta-turn between residues Gly4P and Gly7P, the conformation of the peptide being further stabilised by a pair of hydrogen bonds from the side-chain of Asn2P to main-chain atoms in Val9P. The antigen binding site within the Fab formed a distinct crevice lined by a high proportion of apolar amino acids. Recognition was supplemented by hydrogen bonds from heavy chain residues Thr50H, Asp95H, Leu97H and Tyr100H to main-chain and side-chain atoms in the peptide. Complementarity-determining region (CDR) 3 of the heavy chain was responsible for approximately 50 % of the buried surface area formed by peptide-Fab binding, with the remainder made up from CDRs 1 and 3 of the light chain and CDRs 1 and 2 of the heavy chain. Knowledge of the structures of variable surface antigens such as PorA is an essential prerequisite to a molecular understanding of antigenic variation and its implications for vaccine design.


Subject(s)
Antibodies, Monoclonal/chemistry , Immunoglobulin Fab Fragments/chemistry , Neisseria meningitidis/immunology , Nerve Tissue Proteins/chemistry , Porins/chemistry , Amino Acid Sequence , Animals , Antibodies, Monoclonal/immunology , Antigenic Variation , Antigens, Bacterial/chemistry , Binding Sites , Crystallography, X-Ray , Hydrogen Bonding , Immunoglobulin Heavy Chains/chemistry , Immunoglobulin Light Chains/chemistry , Immunoglobulin Variable Region/chemistry , Mice , Models, Molecular , Molecular Sequence Data , Nerve Tissue Proteins/immunology , Protein Structure, Secondary , Sequence Alignment
16.
J Bacteriol ; 181(18): 5551-6, 1999 Sep.
Article in English | MEDLINE | ID: mdl-10482493

ABSTRACT

Periodically, new disease-associated variants of the human pathogen Neisseria meningitidis arise. These meningococci diversify during spread, and related isolates recovered from different parts of the world have different genetic and antigenic characteristics. An example is the ET-5 complex, members of which were isolated globally from the mid-1970s onwards. Isolates from a hyperendemic outbreak of meningococcal disease in Worcester, England, during the late 1980s were characterized by multilocus sequence typing and sequence determination of antigen genes. These data established that the Worcester outbreak was caused by ET-5 complex meningococci which were not closely related to the ET-5 complex bacteria responsible for a hyperendemic outbreak in the nearby town of Stroud during the years preceding the Worcester outbreak. A comparison with other ET-5 complex meningococci established that there were at least three distinct globally distributed subpopulations within the ET-5 complex, characterized by particular housekeeping and antigen gene alleles. The Worcester isolates belonged to one of these subpopulations, the Stroud isolates belonged to another, and at least one representative of the third subpopulation identified in this work was isolated elsewhere in the United Kingdom. The sequence data demonstrated that ET-5 variants have arisen by multiple complex pathways involving the recombination of antigen and housekeeping genes and de novo mutation of antigen genes. The data further suggest that either the ET-5 complex has been in existence for many years, evolving and spreading relatively slowly until its disease-causing potential was recognized, or it has evolved and spread rapidly since its first identification in the 1970s, with each of the subpopulations attaining a distribution spanning several continents.


Subject(s)
Evolution, Molecular , Neisseria meningitidis/classification , Neisseria meningitidis/genetics , Phylogeny , Porins/genetics , Amino Acid Sequence , Base Sequence , Disease Outbreaks , England/epidemiology , Humans , Meningitis, Meningococcal/epidemiology , Meningitis, Meningococcal/microbiology , Molecular Sequence Data , Neisseria meningitidis/isolation & purification , Porins/chemistry , Sequence Alignment , Sequence Homology, Amino Acid , Sequence Homology, Nucleic Acid
17.
Infect Immun ; 67(5): 2406-13, 1999 May.
Article in English | MEDLINE | ID: mdl-10225902

ABSTRACT

The porin proteins of the pathogenic Neisseria species, Neisseria gonorrhoeae and Neisseria meningitidis, are important as serotyping antigens, putative vaccine components, and for their proposed role in the intracellular colonization of humans. A three-dimensional structural homology model for Neisseria porins was generated from Escherichia coli porin structures and N. meningitidis PorA and PorB sequences. The Neisseria sequences were readily assembled into the 16-strand beta-barrel fold characteristic of porins, despite relatively low sequence identity with the Escherichia proteins. The model provided information on the spatial relationships of variable regions of peptide sequences in the PorA and PorB trimers and insights relevant to the use of these proteins in vaccines. The nucleotide sequences of the porin genes from a number of other Neisseria species were obtained by PCR direct sequencing and from GenBank. Alignment and analysis of all available Neisseria porin sequences by use of the structurally conserved regions derived from the PorA and PorB structural models resulted in the recovery of an improved phylogenetic signal. Phylogenetic analyses were consistent with an important role for horizontal genetic exchange in the emergence of different porin classes and confirmed the close evolutionary relationships of the porins from N. meningitidis, N. gonorrhoeae, Neisseria lactamica, and Neisseria polysaccharea. Only members of this group contained three conserved lysine residues which form a potential GTP binding site implicated in pathogenesis. The model placed these residues on the inside of the pore, in close proximity, consistent with their role in regulating pore function when inserted into host cells.


Subject(s)
Evolution, Molecular , Genetic Variation , Neisseria/chemistry , Neisseria/genetics , Porins/chemistry , Porins/genetics , Amino Acid Sequence , Antigenic Variation , Antigens, Bacterial/chemistry , Antigens, Bacterial/genetics , Base Sequence , DNA Primers/genetics , Escherichia coli/genetics , Humans , Models, Molecular , Molecular Sequence Data , Neisseria/immunology , Neisseria gonorrhoeae/chemistry , Neisseria gonorrhoeae/genetics , Neisseria gonorrhoeae/immunology , Neisseria meningitidis/chemistry , Neisseria meningitidis/genetics , Neisseria meningitidis/immunology , Phylogeny , Porins/immunology , Protein Conformation , Sequence Homology, Amino Acid
18.
Mol Microbiol ; 30(3): 647-56, 1998 Nov.
Article in English | MEDLINE | ID: mdl-9822829

ABSTRACT

Members of the genus Neisseria, including the human pathogens Neisseria meningitidis and Neisseria gonorrhoeae, express at least one member of a family of related porins. N. meningitidis is the only species known to express a second porin, the meningococcal serosubtyping antigen PorA, the most divergent member of this family. Unexpectedly, a porA gene was identified in the gonococcal genome. Both the gonococcal and meningococcal porA loci were adjacent to a homologue of the Escherichia coli greA gene, although the IS1106 element downstream of porA in some meningococci was absent in the gonococcus. Almost identical porA loci were present in four unrelated gonococcal isolates and clinical specimens from patients with gonorrhoea. Lack of PorA expression in the gonococcus resulted from mutations in the promoter region, which prevented transcription, and frameshift mutations in the coding region of the porA gene. Hybridization and amplification experiments, showing the absence of a porA gene in seven other Neisseria species, suggested that porA was acquired by a common ancestor of the gonococcus and meningococcus but inactivated in the gonococcus on speciation. This implies that, while advantageous during colonization of the upper respiratory tract, this protein has no function in, or hinders, colonization of the urogenital tract.


Subject(s)
Evolution, Molecular , Neisseria gonorrhoeae/genetics , Neisseria gonorrhoeae/pathogenicity , Porins/genetics , Pseudogenes/genetics , Amino Acid Sequence , Bacterial Proteins/genetics , Base Sequence , Genes, Bacterial/genetics , Genes, Regulator/genetics , Molecular Sequence Data , Mutation/genetics , Neisseria meningitidis/genetics , Phylogeny , Promoter Regions, Genetic/genetics , RNA, Messenger/genetics , Sequence Analysis, DNA , Sequence Homology, Amino Acid
19.
Epidemiol Infect ; 121(1): 95-101, 1998 Aug.
Article in English | MEDLINE | ID: mdl-9747760

ABSTRACT

Changes in the frequency of serogroup B non serotypable (B:NT) meningococci isolated in England and Wales were investigated by T-track fingerprint analysis, DNA nucleotide sequence determination, and serotyping by whole cell ELISA and dot blot assay. Seventy-three per cent of the isolates designated as B:NT by the Meningococcal Reference Unit (MRU) dot blot assay during 1993-4, expressed variants of the serotyping antigen, PorB, that were serotype 4 by whole cell ELISA. T-track fingerprint patterns of these and other 'serotype 4' isolates revealed five distinct porB alleles which were shown by nucleotide sequence determination to encode different peptide sequences. Differential binding of the 'serotype 4' mAbs MN14G21 and 5DC4C8G8 in whole cell ELISA and dot blot assays was the result, (i) of differences in the peptide sequence of predicted surface loop I and (ii) an amino acid deletion in predicted loop VI of the PorB protein.


Subject(s)
Antigens, Bacterial/analysis , Bacterial Outer Membrane Proteins/genetics , DNA, Bacterial/analysis , Meningococcal Infections/epidemiology , Neisseria meningitidis/classification , Porins , Amino Acid Sequence , Antigens, Bacterial/genetics , DNA Fingerprinting , England/epidemiology , Enzyme-Linked Immunosorbent Assay , Humans , Meningococcal Infections/microbiology , Molecular Sequence Data , Polymerase Chain Reaction , Serotyping , Wales/epidemiology
20.
Proc Natl Acad Sci U S A ; 95(6): 3140-5, 1998 Mar 17.
Article in English | MEDLINE | ID: mdl-9501229

ABSTRACT

Traditional and molecular typing schemes for the characterization of pathogenic microorganisms are poorly portable because they index variation that is difficult to compare among laboratories. To overcome these problems, we propose multilocus sequence typing (MLST), which exploits the unambiguous nature and electronic portability of nucleotide sequence data for the characterization of microorganisms. To evaluate MLST, we determined the sequences of approximately 470-bp fragments from 11 housekeeping genes in a reference set of 107 isolates of Neisseria meningitidis from invasive disease and healthy carriers. For each locus, alleles were assigned arbitrary numbers and dendrograms were constructed from the pairwise differences in multilocus allelic profiles by cluster analysis. The strain associations obtained were consistent with clonal groupings previously determined by multilocus enzyme electrophoresis. A subset of six gene fragments was chosen that retained the resolution and congruence achieved by using all 11 loci. Most isolates from hyper-virulent lineages of serogroups A, B, and C meningococci were identical for all loci or differed from the majority type at only a single locus. MLST using six loci therefore reliably identified the major meningococcal lineages associated with invasive disease. MLST can be applied to almost all bacterial species and other haploid organisms, including those that are difficult to cultivate. The overwhelming advantage of MLST over other molecular typing methods is that sequence data are truly portable between laboratories, permitting one expanding global database per species to be placed on a World-Wide Web site, thus enabling exchange of molecular typing data for global epidemiology via the Internet.


Subject(s)
Bacterial Typing Techniques , Meningococcal Infections/microbiology , Neisseria meningitidis/classification , Neisseria meningitidis/genetics , Sequence Analysis, DNA/methods , Cluster Analysis , Evaluation Studies as Topic , Gene Frequency , Genes, Bacterial , Humans , Molecular Sequence Data , Neisseria meningitidis/pathogenicity , Virulence/genetics
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