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1.
Chemphyschem ; : e202400532, 2024 Jun 28.
Article in English | MEDLINE | ID: mdl-38941264

ABSTRACT

It is known that various polysulfide species determine the color of sodalite-group minerals (haüyne, lazurite, slyudyankaite), and that heating induces their transformations and color change, but the mechanisms of the transitions are unknown. A prominent example is the decay of cyclic S6 molecule. Using density-functional simulations, we explore its main decay pathways into the most probable final reaction products (the pairs of radical anions  S3•-+  S3•- and S2•- +  S4•-).  It was found that the most favorable reaction path involves initial capture of one electron by the S6 molecule, which greatly facilitates its decay of S6 and leads to the opening of the S6 cycle, and subsequent decomposition of the thus formed chain radical anion, with a limiting energy barrier of ~0.4 eV. Neutral polysulfide molecules capture one electron with a significant energy reduction. The radical anions Sn•- (n = 2 - 6) are the most stable ones among corresponding species with the same n values and different charges. The capture of the second electron by S6•- occurs with a huge energy barrier (~2 eV). The results of the DFT calculations are in agreement with experimental data on the products of thermal conversions of extra-framework S-bearing groups in sodalite-group minerals.

2.
Phys Chem Chem Phys ; 25(13): 9294-9299, 2023 Mar 29.
Article in English | MEDLINE | ID: mdl-36920023

ABSTRACT

Using ab initio evolutionary algorithm USPEX, we predict structures of sulfur molecules Sn (n = 2 - 21). It is shown that for n ≥ 5 stable structures of sulfur molecules are closed helical rings, which is in agreement with the experimental data and previous calculations. We investigate the stability of molecules using the following criteria: second-order energy difference (Δ2E), fragmentation energy (Efrag) and HOMO-LUMO gaps. The S8 molecule has the highest value of Δ2E and forms the most common allotropic form of sulfur (orthorhombic α-S), into which all other modifications convert over time at room temperature. Commonly found molecules S12 and S6 also have strongly positive Δ2E. Another well-known molecule, S7, has negative Δ2E, but at temperatures above 900 K has positive second-order free energy difference Δ2G. Generally, Δ2E (or Δ2G at finite temperatures) is a quantitative measure of the stability allowing one to predict the ease of formation of molecules and corresponding molecular crystals. Temperature dependence of the above-mentioned measures of stability explains a wide range of facts about sulfur crystalline allotropes, molecules in the gas phase, etc.

3.
Zootaxa ; 4121(4): 383-411, 2016 Jun 10.
Article in English | MEDLINE | ID: mdl-27395231

ABSTRACT

Morphological descriptions of three "walking nematode" species found for the first time in the White Sea are presented. Draconema ophicephalum (Claparède, 1863) (Draconematidae) and Epsilonema steineri Chitwood, 1935 (Epsilonematidae), both known from insufficient material and females only, are re-described and problems of their taxonomic identification as well as species compositions of respective genera are discussed. The new species Prochaetosoma marisalbi sp. n. (Draconematidae) differs from other Prochaetosoma species except P. longicapitatum (Allgén, 1935) in that the pharyngeal bulb lumen is not cuticularised, from P. longicapitatum by shape of body and rostrum, greater number of cephalic adhesive tubes, and from P. maertensi Decraemer, 1989 by having a relatively longer tail, fewer anterior adhesive tubes and longer spicules, besides lacking cuticular thickening in the pharyngeal bulb. Draconema hoonsooi, D. youngeouni, P.rochaetosoma beomseomense, P. brevicaudatum, P. byungilli, P. cracense, P. saheungi, P. sujungi, P. supseomense erected by Rho & Min (2011) are considered as invalid species while Prochaetosoma arcticum, P. lugubre and Epsilonema cygnoides are assumed as species inquirenda. From a phylogenetic tree based on the 18S rRNA gene, all three White Sea species adjoin to unidentified species of their respective genera.


Subject(s)
Adenophorea/classification , Adenophorea/anatomy & histology , Adenophorea/genetics , Adenophorea/growth & development , Animal Distribution , Animal Structures/anatomy & histology , Animal Structures/growth & development , Animals , Body Size , Female , Male , Oceans and Seas , Organ Size , Phylogeny , Seawater/parasitology
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