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1.
RSC Adv ; 14(29): 21158-21173, 2024 Jun 27.
Article in English | MEDLINE | ID: mdl-38966813

ABSTRACT

Statins are an important class of drugs used to lower blood cholesterol levels and are often used to combat cardiovascular disease. In view of the importance of safe and reliable supply and production of statins in modern medicine and the global need for sustainable processes, various biocatalytic strategies for their synthesis have been investigated. In this work, a novel biocatalytic route to a statin side chain precursor was investigated in a one-pot cascade reaction starting from the protected alcohol N-(3-hydroxypropyl)-2-phenylacetamide, which is oxidized to the corresponding aldehyde in the first reaction step, and then reacts with two equivalents of acetaldehyde to form the final product N-(2-((2S,4S,6S)-4,6-dihydroxytetrahydro-2H-pyran-2-yl)ethyl)-2-phenylacetamide (phenylacetamide-lactol). To study this complex reaction, an enzyme reaction engineering approach was used, i.e. the kinetics of all reactions occurring in the cascade (including side reactions) were determined. The obtained kinetic model together with the simulations gave an insight into the system and indicated the best reactor mode for the studied reaction, which was fed-batch with acetaldehyde feed to minimize its negative effect on the enzyme activity during the reaction. The mathematical model of the process was developed and used to simulate different scenarios and to find the reaction conditions (enzyme and coenzyme concentration, substrate feed concentration and flow rate) at which the highest yield of phenylacetamide-lactol (75%) can be obtained. In the end, our goal was to show that this novel cascade route is an interesting alternative for the synthesis of the statin side chain precursor and that is why we also calculated an initial estimate of the potential value addition.

2.
Biotechnol Lett ; 42(5): 819-824, 2020 May.
Article in English | MEDLINE | ID: mdl-31974648

ABSTRACT

OBJECTIVE: Regio- and stereoselective hydroxylation of lithocholic acid (LCA) using CYP107D1 (OleP), a cytochrome P450 monooxygenase from the oleandomycin synthesis pathway of Streptomyces antibioticus. RESULTS: Co-expression of CYP107D1 from S. antibioticus and the reductase/ferredoxin system PdR/PdX from Pseudomonas putida was performed in Escherichia coli whole cells. In vivo hydroxylation of LCA exclusively yielded the 6ß-OH product murideoxycholic acid (MDCA). In resting cells, 19.5% of LCA was converted to MDCA within 24 h, resulting in a space time yield of 0.04 mmol L-1 h-1. NMR spectroscopy confirmed the identity of MDCA as the sole product. CONCLUSIONS: The multifunctional P450 monooxygenase CYP107D1 (OleP) can hydroxylate LCA, forming MDCA as the only product.


Subject(s)
Cytochrome P-450 Enzyme System/genetics , Cytochrome P-450 Enzyme System/metabolism , Lithocholic Acid/chemistry , Streptomyces antibioticus/enzymology , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Biocatalysis , Cloning, Molecular , Deoxycholic Acid/metabolism , Escherichia coli/genetics , Escherichia coli/growth & development , Hydroxylation , Oxidoreductases/genetics , Oxidoreductases/metabolism , Pseudomonas putida/enzymology , Pseudomonas putida/genetics , Streptomyces antibioticus/genetics
3.
J Phys Chem B ; 120(9): 2165-78, 2016 Mar 10.
Article in English | MEDLINE | ID: mdl-26890079

ABSTRACT

Construction of the presynaptic filament (PSF) of proper helical structure by Rad51 recombinases is a prerequisite of the progress of homologous recombination repair. We studied the contribution of ATP-binding to this structure of wt human Rad51 (hRad51). We exploited the protein-dissociation effect of high hydrostatic pressure to determine the free energy of dissociation of the protomer interfaces in hRad51 oligomer states and used electron microscopy to obtain topological parameters. Without cofactors ATP and Ca(2+) and template DNA, hRad51 did not exist in monomer form, but it formed rodlike long filaments without helical order. ΔG(diss) indicated a strong inherent tendency of aggregation. Binding solely ssDNA left the filament unstructured with slightly increased ΔG(diss). Adding only ATP and Ca(2+) to the buffer disintegrated the self-associated rods into rings and short helices of further increased ΔG(diss). Rad51 binding to ssDNA only with ATP and Ca bound could lead to ordered helical filament formation of proper pitch size with interface contacts of K(d) ∼ 2 × 10(-11) M, indicating a structure of outstanding stability. ATP/Ca binding increased the ΔG(diss) of protomer contacts in the filament by 16 kJ/mol. The results emphasize that ATP-binding in the PSF of hRad51 has an essential, yet purely structural, role.


Subject(s)
Adenosine Triphosphate/metabolism , DNA, Single-Stranded/metabolism , Rad51 Recombinase/metabolism , Humans , Microscopy, Electron, Transmission , Protein Binding , Spectrometry, Fluorescence
5.
Chem Commun (Camb) ; (47): 7405-7, 2009 Dec 21.
Article in English | MEDLINE | ID: mdl-20024243

ABSTRACT

1,3-Didodecylimidazolium salts have been prepared as first representatives of a new class of ionic liquid crystals (ILCs), showing thermotropic liquid crystalline behaviour in an extended temperature range below 70 degrees C. Remarkably strong non-Newtonian viscosity behaviour was found for the liquid-crystalline state of these ILCs.


Subject(s)
Imidazolines/chemistry , Ionic Liquids , Liquid Crystals/chemistry , Alkylation , Models, Molecular , Molecular Conformation , Temperature , Viscosity
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