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1.
Diagnostics (Basel) ; 13(4)2023 Feb 12.
Article in English | MEDLINE | ID: mdl-36832174

ABSTRACT

Cervical cancer is one of the most common types of cancer among women, which has higher death-rate than many other cancer types. The most common way to diagnose cervical cancer is to analyze images of cervical cells, which is performed using Pap smear imaging test. Early and accurate diagnosis can save the lives of many patients and increase the chance of success of treatment methods. Until now, various methods have been proposed to diagnose cervical cancer based on the analysis of Pap smear images. Most of the existing methods can be divided into two groups of methods based on deep learning techniques or machine learning algorithms. In this study, a combination method is presented, whose overall structure is based on a machine learning strategy, where the feature extraction stage is completely separate from the classification stage. However, in the feature extraction stage, deep networks are used. In this paper, a multi-layer perceptron (MLP) neural network fed with deep features is presented. The number of hidden layer neurons is tuned based on four innovative ideas. Additionally, ResNet-34, ResNet-50 and VGG-19 deep networks have been used to feed MLP. In the presented method, the layers related to the classification phase are removed in these two CNN networks, and the outputs feed the MLP after passing through a flatten layer. In order to improve performance, both CNNs are trained on related images using the Adam optimizer. The proposed method has been evaluated on the Herlev benchmark database and has provided 99.23 percent accuracy for the two-classes case and 97.65 percent accuracy for the 7-classes case. The results have shown that the presented method has provided higher accuracy than the baseline networks and many existing methods.

2.
Comput Intell Neurosci ; 2022: 6895833, 2022.
Article in English | MEDLINE | ID: mdl-36479023

ABSTRACT

Cell phenotype classification is a critical task in many medical applications, such as protein localization, gene effect identification, and cancer diagnosis in some types. Fluorescence imaging is the most efficient tool to analyze the biological characteristics of cells. So cell phenotype classification in fluorescence microscopy images has received increased attention from scientists in the last decade. The visible structures of cells are usually different in terms of shape, texture, relationship between intensities, etc. In this scope, most of the presented approaches use one type or joint of low-level and high-level features. In this paper, a new approach is proposed based on a combination of low-level and high-level features. An improved version of local quinary patterns is used to extract low-level texture features. Also, an innovative multilayer deep feature extraction method is performed to extract high-level features from DenseNet. In this respect, an output feature map of dense blocks is entered in a separate way to pooling and flatten layers, and finally, feature vectors are concatenated. The performance of the proposed approach is evaluated on the benchmark dataset 2D-HeLa in terms of accuracy. Also, the proposed approach is compared with state-of-the-art methods in terms of classification accuracy. Comparison of results demonstrates higher performance of the proposed approach in comparison with some efficient methods.

3.
Comput Intell Neurosci ; 2022: 1658615, 2022.
Article in English | MEDLINE | ID: mdl-36507230

ABSTRACT

Since two years ago, the COVID-19 virus has spread strongly in the world and has killed more than 6 million people directly and has affected the lives of more than 500 million people. Early diagnosis of the virus can help to break the chain of transmission and reduce the death rate. In most cases, the virus spreads in the infected person's chest. Therefore, the analysis of a chest CT scan is one of the most efficient methods for diagnosing a patient. Until now, various methods have been presented to diagnose COVID-19 disease in chest CT-scan images. Most recent studies have proposed deep learning-based methods. But handcrafted features provide acceptable results in some studies too. In this paper, an innovative approach is proposed based on the combination of low-level and deep features. First of all, local neighborhood difference patterns are performed to extract handcrafted texture features. Next, deep features are extracted using MobileNetV2. Finally, a two-level decision-making algorithm is performed to improve the detection rate especially when the proposed decisions based on the two different feature set are not the same. The proposed approach is evaluated on a collected dataset of chest CT scan images from June 1, 2021, to December 20, 2021, of 238 cases in two groups of patient and healthy in different COVID-19 variants. The results show that the combination of texture and deep features can provide better performance than using each feature set separately. Results demonstrate that the proposed approach provides higher accuracy in comparison with some state-of-the-art methods in this scope.


Subject(s)
COVID-19 , SARS-CoV-2 , Humans , COVID-19/diagnostic imaging , Thorax/diagnostic imaging , Tomography, X-Ray Computed
4.
Comput Biol Med ; 144: 105392, 2022 05.
Article in English | MEDLINE | ID: mdl-35299043

ABSTRACT

Cervical cancer is one of the most common types of cancer for women. Early and accurate diagnosis can save the patient's life. Pap smear testing is nowadays commonly used to diagnose cervical cancer. The type, structure and size of the cervical cells in pap smears images are major factors which are used by specialist doctors to diagnosis abnormality. Various image processing-based approaches have been proposed to acquire pap smear images and diagnose cervical cancer in pap smears images. Accuracy is usually the primary objective in evaluating the performance of these systems. In this paper, a two-stage method for pap smear image classification is presented. The aim of the first stage is to extract texture information of the cytoplasm and nucleolus jointly. For this purpose, the pap smear image is first segmented using the appropriate threshold. Then, a texture descriptor is proposed titled modified uniform local ternary patterns (MULTP), to describe the local textural features. Secondly, an optimized multi-layer feed-forward neural network is used to classify the pap smear images. The proposed deep neural network is optimized using genetic algorithm in terms of number of hidden layers and hidden nodes. In this respect, an innovative chromosome representation and cross-over process is proposed to handle these parameters. The performance of the proposed method is evaluated on the Herlev database and compared with many other efficient methods in this scope under the same validation conditions. The results show that the detection accuracy of the proposed method is higher than the compared methods. Insensitivity to image rotation is one of the major advantages of the proposed method. Results show that the proposed method has the capability to be used in online problems because of low run time. The proposed texture descriptor, MULTP is a general operator which can be used in many computer vision problems to describe texture properties of image. Also, the proposed optimization algorithm can be used in deep-networks to improve performance.


Subject(s)
Uterine Cervical Neoplasms , Algorithms , Cervix Uteri , Female , Humans , Papanicolaou Test/methods , Uterine Cervical Neoplasms/diagnostic imaging , Vaginal Smears/methods
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