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Biomed Res Int ; 2013: 585748, 2013.
Article in English | MEDLINE | ID: mdl-23984384

ABSTRACT

We have cloned genes encoding elongation factors EF-Tu and EF-Ts from Pseudomonas aeruginosa and expressed and purified the proteins to greater than 95% homogeneity. Sequence analysis indicated that P. aeruginosa EF-Tu and EF-Ts are 84% and 55% identical to E. coli counterparts, respectively. P. aeruginosa EF-Tu was active when assayed in GDP exchange assays. Kinetic parameters for the interaction of EF-Tu with GDP in the absence of EF-Ts were observed to be K M = 33 µM, k cat (obs) = 0.003 s(-1), and the specificity constant k cat (obs)/K M was 0.1 × 10(-3) s(-1) µM(-1). In the presence of EF-Ts, these values were shifted to K M = 2 µM, k cat (obs) = 0.005 s(-1), and the specificity constant k(cat)(obs)/K M was 2.5 × 10(-3) s(-1) µM(-1). The equilibrium dissociation constants governing the binding of EF-Tu to GDP (K GDP) were 30-75 nM and to GTP (K GTP) were 125-200 nM. EF-Ts stimulated the exchange of GDP by EF-Tu 10-fold. P. aeruginosa EF-Tu was active in forming a ternary complex with GTP and aminoacylated tRNA and was functional in poly(U)-dependent binding of Phe-tRNA(Phe) at the A-site of P. aeruginosa ribosomes. P. aeruginosa EF-Tu was active in poly(U)-programmed polyphenylalanine protein synthesis system composed of all P. aeruginosa components.


Subject(s)
Bacterial Proteins/metabolism , Peptide Elongation Factor Tu/metabolism , Peptide Elongation Factors/metabolism , Pseudomonas aeruginosa/metabolism , Amino Acid Sequence , Bacterial Proteins/chemistry , Bacterial Proteins/isolation & purification , Cloning, Molecular , Escherichia coli , Guanosine Diphosphate/metabolism , Guanosine Triphosphate/metabolism , Kinetics , Molecular Sequence Data , Peptide Elongation Factor Tu/chemistry , Peptide Elongation Factor Tu/isolation & purification , Peptide Elongation Factors/chemistry , Peptide Elongation Factors/isolation & purification , Poly U/metabolism , Protein Biosynthesis , RNA, Transfer/metabolism , Ribosomes/metabolism , Sequence Alignment , Sequence Analysis, Protein , Sequence Homology, Amino Acid
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