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1.
Lett Appl Microbiol ; 65(4): 298-305, 2017 Oct.
Article in English | MEDLINE | ID: mdl-28708249

ABSTRACT

The objective of the present study was to assess the occurrence of major waterborne enteric viruses (enterovirus, norovirus, adenovirus, rotavirus, hepatitis A and E virus) along the Tiber River in Italy, in areas affected by different kinds of anthropogenic pressure (agricultural, urban, industrial and pristine). Moreover, in light of the recent abundant detection of human bocavirus in urban wastewater samples in Italy, the occurrence of this virus was also assessed. Virus detection was based on nested PCR followed by sequencing, and on real-time PCR. A correlation with anthropogenic pressure was observed. The urban and industrial areas were the most contaminated (100 and 75% of samples were positive for at least one virus respectively). The agricultural area was less contaminated, with 50% of samples positive. None of the samples collected in a pristine area were positive for viruses. The most frequently detected virus was human bocavirus, identified in 37·5% of samples, followed by norovirus and enterovirus (28% each) and adenovirus (21·6%). Rotavirus, and hepatitis A and E viruses were less common (<9%). Although Human Bocavirus is not considered a waterborne pathogen, the widespread contamination of river waters suggests that virus transmission via the water route should not be neglected. SIGNIFICANCE AND IMPACT OF THE STUDY: To the best of our knowledge, this study constitutes the first attempt to assess the occurrence of enteric viruses in river waters, in areas differentially influenced by anthropogenic pressure. Enteric viruses (enterovirus, norovirus, adenovirus, rotavirus, hepatitis A and E viruses, and bocavirus) were widespread in the industrial and urban areas, and were less frequently detected in the agricultural area. Interestingly, human bocavirus was the most frequently detected virus, outnumbering even adenoviruses, known to be widespread in water environments. The widespread presence of bocavirus in surface waters suggests that a potential role of water in its transmission should not be excluded.


Subject(s)
Rivers/virology , Virus Diseases/transmission , Water Microbiology , Water Quality , Waterborne Diseases/virology , Adenoviridae/genetics , Adenoviridae/isolation & purification , Bocavirus/genetics , Bocavirus/isolation & purification , Enterovirus/genetics , Enterovirus/isolation & purification , Hepatitis A virus/genetics , Hepatitis A virus/isolation & purification , Hepatitis E virus/genetics , Hepatitis E virus/isolation & purification , Humans , Italy , Norovirus/genetics , Norovirus/isolation & purification , Real-Time Polymerase Chain Reaction , Rotavirus/genetics , Rotavirus/isolation & purification , Virus Diseases/virology , Wastewater/virology , Waterborne Diseases/transmission
3.
Biosens Bioelectron ; 28(1): 320-5, 2011 Oct 15.
Article in English | MEDLINE | ID: mdl-21816606

ABSTRACT

A porous silicon biosensor based on P450 enzyme for arachidonic acid detection was developed. A new transduction method is presented with a simultaneous measurement of refractive index and fluorescence intensity changes when the analyte is binding to an enzyme on the porous silicon surface. A fluorophore bound to a cysteine residue in an allosteric position of the haem domain (BMP) of cytochrome P450 BM3 enhances its fluorescence intensity upon interaction with its substrate arachidonic acid, involved in diseases such as Alzheimer's, liver cancer and cellular inflammation processes. BMP has been anchored on porous silicon surface and the new transduction method has been successfully exploited to develop a biosensor for arachidonic acid, reaching a detection limit of 10 µM arachidonic acid in a dynamic range of 10-200 µM. Moreover, the change of the refractive index has been also monitored at the same time, displaying a higher detection limit of 30 µM. Preliminary test were also conducted in plasma proving the high specificity and selectivity of the sensor even in presence of interferents in the range of 50-100 µM. Here we suggest these two detection systems could be used simultaneously to increase the accuracy and the dynamic range of the sensor avoiding a false positive response.


Subject(s)
Arachidonic Acid/analysis , Bacterial Proteins/chemistry , Biosensing Techniques/methods , Cytochrome P-450 Enzyme System/chemistry , NADPH-Ferrihemoprotein Reductase/chemistry , Silicon/chemistry , Porosity , Refractometry , Sensitivity and Specificity , Spectrometry, Fluorescence , Spectroscopy, Fourier Transform Infrared
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