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1.
Lett Appl Microbiol ; 41(6): 487-92, 2005.
Article in English | MEDLINE | ID: mdl-16305675

ABSTRACT

AIMS: To investigate the resuscitation of acid-injured Salmonella enterica in selected enrichment broths, in apple juice and on cut surfaces of apple and cucumber slices. METHODS AND RESULTS: Following exposure to 2.4% acetic acid for 7 min, S. enterica (serovars Mbandaka, Chester and Newport) cells were used to inoculate enrichment broths, phosphate-buffered saline (PBS), apple juice and fruit slices. Injured Salmonella cells resuscitated and regained the ability to form colonies on selective agar (Xylose-Lysine-Tergitol 4) if they were incubated in lactose broth (LB), universal pre-enrichment broth (UPB) or buffered peptone water (BPW), but not in tetrathionate broth, PBS or apple juice. The resuscitation occurred at a significantly (P > 0.05) faster rate in UPB than in LB or BPW. The resuscitation also occurred on the surfaces of fresh-cut cucumber at 20 degrees C, but not at 4 degrees C. CONCLUSIONS: Acid-injured Salmonella cells resuscitated in nonselective enrichment broths at different rates, but not in selective enrichment broth, apple juice, PBS or on fresh-cut apple. SIGNIFICANCE AND IMPACT OF THE STUDY: Pre-enrichment of food samples in UPB prior to selective enrichment is recommended. Injured Salmonella cells have the ability to resuscitate on fresh-cut surfaces of cucumber when stored at abusive temperatures.


Subject(s)
Cucumis sativus/chemistry , Malus/chemistry , Salmonella/physiology , Acids/pharmacology , Cucumis sativus/microbiology , Culture Media , Food Microbiology , Malus/microbiology , Salmonella/drug effects , Salmonella/genetics
2.
J Food Prot ; 66(1): 44-51, 2003 Jan.
Article in English | MEDLINE | ID: mdl-12540180

ABSTRACT

A study was done to determine the efficacy of aqueous ozone treatment in killing Listeria monocytogenes on inoculated alfalfa seeds and sprouts. Reductions in populations of naturally occurring aerobic microorganisms on sprouts and changes in the sensory quality of sprouts were also determined. The treatment (10 or 20 min) of seeds in water (4 degrees C) containing an initial concentration of 21.8 +/- 0.1 microg/ml of ozone failed to cause a significant (P < or = 0.05) reduction in populations of L. monocytogenes. The continuous sparging of seeds with ozonated water (initial ozone concentration of 21.3 +/- 0.2 microg/ml) for 20 min significantly reduced the population by 1.48 log10 CFU/g. The treatment (2 min) of inoculated alfalfa sprouts with water containing 5.0 +/- 0.5, 9.0 +/- 0.5, or 23.2 +/- 1.6 microg/ml of ozone resulted in significant (P < or = 0.05) reductions of 0.78, 0.81, and 0.91 log10 CFU/g, respectively, compared to populations detected on sprouts treated with water. Treatments (2 min) with up to 23.3 +/- 1.6 microg/ml of ozone did not significantly (P > 0.05) reduce populations of aerobic naturally occurring microorganisms. The continuous sparging of sprouts with ozonated water for 5 to 20 min caused significant reductions in L. monocytogenes and natural microbiota compared to soaking in water (control) but did not enhance the lethality compared to the sprouts not treated with continuous sparging. The treatment of sprouts with ozonated water (20.0 microg/ml) for 5 or 10 min caused a significant deterioration in the sensory quality during subsequent storage at 4 degrees C for 7 to 11 days. Scanning electron microscopy of uninoculated alfalfa seeds and sprouts showed physical damage, fungal and bacterial growth, and biofilm formation that provide evidence of factors contributing to the difficulty of killing microorganisms by treatment with ozone and other sanitizers.


Subject(s)
Listeria monocytogenes/drug effects , Medicago sativa/microbiology , Ozone/pharmacology , Taste , Water/chemistry , Colony Count, Microbial , Dose-Response Relationship, Drug , Food Microbiology , Germination , Listeria monocytogenes/growth & development , Medicago sativa/growth & development , Medicago sativa/ultrastructure , Microscopy, Electron, Scanning , Oxidants, Photochemical/pharmacology , Seeds/microbiology , Seeds/ultrastructure , Taste/drug effects , Time Factors , Treatment Outcome
3.
J Food Prot ; 64(8): 1110-5, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11510644

ABSTRACT

The native microflora of three types of produce (green bell peppers, Romaine lettuce, and prepeeled baby carrots) and two types of sprouting seeds (alfalfa and clover) were investigated. Aerobic plate count (APC) for each produce or seed type as determined on Pseudomonas agar F (PAF) with incubation at 28 degrees C was in the range of 4 to 7 log CFU per g of tissue or seed. There was no significant difference (P > or = 0.05) in APC when the determinations were made with three agar media including PAF, brain heart infusion agar, and plate count agar. However, the APC as determined from plates that were incubated at 28 degrees C was significantly (P < or = 0.05) higher than with incubation at 37 degrees C. Fluorescent pseudomonads accounted for 23 to 73% of APC and 6 to 18% of APC recovered from carrots, pepper, and lettuce were pectolytic. Forty-eight strains of pectolytic bacteria were randomly isolated and identified, respectively, as members of the genera of Pseudomonas, Erwinia, Bacillus, Xanthomonas, or Flavobacterium. Lactic acid bacteria and/or yeast were consistently isolated from baby carrots, lettuce, and sprouting seeds (alfalfa or clover) but not from green bell peppers. Approximately 120 strains of indigenous microflora were tested for their ability to inhibit the growth of Salmonella Chester, Listeria monocytogenes, Escherichia coli, or Erwinia carotovora subsp. carotovora on PAF. Six isolates capable of inhibiting the growth of at least one pathogen were isolated and identified, respectively, as Bacillus spp. (three strains), Pseudomonas aeruginosa (one strain), Pseudomonas fluorescens (strain A3), and yeast (strain D1). When green pepper disks were inoculated with strains A3 and D1, the growth of Salmonella Chester and L. monocytogenes on the disks was reduced by 1 and 2 logs, respectively, over a period of 3 days. Application of strains A3 and D1 as potential biopreservatives for enhancing the quality and safety of fresh produce is discussed.


Subject(s)
Escherichia coli O157/growth & development , Listeria monocytogenes/growth & development , Pseudomonas/physiology , Salmonella/growth & development , Vegetables/microbiology , Agar , Capsicum/microbiology , Colony Count, Microbial , Daucus carota/microbiology , Escherichia coli O157/metabolism , Food Microbiology , Lactuca/microbiology , Listeria monocytogenes/metabolism , Plants, Medicinal , Salmonella/metabolism , Seeds/microbiology , Temperature
4.
Lett Appl Microbiol ; 31(1): 25-9, 2000 Jul.
Article in English | MEDLINE | ID: mdl-10886609

ABSTRACT

Thirty-eight strains of filamentous bacteria, many of which are thermophilic or thermotolerant and commonly found in composts and mouldy fodders, were examined for their ability to produce cutinolytic esterase (cutinase) in culture media supplemented with cutin, suberin or cutin-containing agricultural by-products. Initially, the ability of culture supernatants to hydrolyse the artificial substrate p-nitrophenyl butyrate was determined by spectrophotometric assays. Only one bacterium, Thermoactinomyces vulgaris NRRL B-16117, exhibited cutinolytic esterase production. The enzyme was highly inducible, was repressed by the presence of glucose in the medium and hydrolysed both apple and tomato cutins. Inducers included apple cutin, apple pomace, tomato peel, potato suberin and commercial cork. Unlike similar fungal enzymes, the T. vulgaris cutinolytic esterase was not inducible by cutin hydrolysate. The cutinolytic esterase exhibited a half-life of over 60 min at 70 degrees C and a pH optimum of >/= 11.0. This study indicates that thermophylic filamentous bacteria may be excellent commercial sources of heat-stable cutin-degrading enzymes that can be produced by fermentation of low cost feedstocks.


Subject(s)
Actinomycetales/enzymology , Carboxylic Ester Hydrolases/biosynthesis , Membrane Lipids/metabolism , Actinomycetales/metabolism , Bioreactors , Enzyme Induction , Enzyme Repression , Fermentation , Fruit/metabolism , Glucose/pharmacology , Hot Temperature , Hydrogen-Ion Concentration , Lipids , Solanum lycopersicum/metabolism
5.
J Food Prot ; 63(5): 625-32, 2000 May.
Article in English | MEDLINE | ID: mdl-10826720

ABSTRACT

Scanning electron microscopy was used to examine the cotyledons, hypocotyls, and roots of alfalfa, broccoli, clover, and sunflower sprouts purchased from retail outlets as well as alfalfa sprouts grown in the laboratory using a tray system equipped with automatic irrigation. Biofilms were observed on all plant parts of the four types of commercially grown sprouts. Biofilms were also commonly observed on alfalfa sprouts grown in the laboratory by 2 days of growth. Rod-shaped bacteria of various sizes were predominant on all sprouts examined both as free-living cells and as components of biofilms. Occasionally, cocci-shaped bacteria as well as yeast cells were also present in biofilms. The microbes contained in the biofilms appeared to be attached to each other and to the plant surface by a matrix, most likely composed of bacterial exopolysaccharides. Biofilms were most abundant and of the largest dimensions on cotyledons, sometimes covering close to the entire cotyledon surface (approximately 2 mm in length). Naturally occurring biofilms on sprouts may afford protected colonization sites for human pathogens such as Salmonella and Escherichia coli O157:H7, making their eradication with antimicrobial compounds difficult.


Subject(s)
Biofilms , Food Microbiology , Medicago sativa/microbiology , Brassica/microbiology , Helianthus/microbiology , Microscopy, Electron, Scanning
6.
Carbohydr Res ; 323(1-4): 139-46, 2000 Jan 12.
Article in English | MEDLINE | ID: mdl-10782295

ABSTRACT

The introduction of size-exclusion chromatography (SEC) analysis of polysaccharides prior to MALDI mass spectroscopy accounts for the determination of the molecular mass of the repeating unit when neutral homopolymers are investigated. In the case of natural polysaccharides characterised by more complicated structural features (presence of non-carbohydrate substituents, charged groups, etc.), this mass value usually is in agreement with more than one sugar composition. Therefore, it is not sufficient to give the correct monosaccharidic composition of the polysaccharide investigated. To solve this problem, MALDI spectra were recorded on the permethylated sample and post-source decay experiments were performed on precursor ions. In this way, the composition (in terms of Hex, HexNAc, etc.), size and sequence of the repeating unit were determined.


Subject(s)
Polysaccharides/chemistry , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Dextrans/chemistry , Glucans/chemistry , Monosaccharides/chemistry , Polysaccharides, Bacterial/chemistry
7.
Int J Biol Macromol ; 26(4): 249-53, 1999 Dec 01.
Article in English | MEDLINE | ID: mdl-10569286

ABSTRACT

The influence of pyruvate ketals and acetyl groups on the conformational behaviour of the exopolysaccharide produced by Pseudomonas 'gingeri' strain Pf9 has been investigated experimentally through studies of intrinsic viscosity and circular dichroism experiments. A conformational variation was detected as a function of the ionic strength. Measurements carried out on the native polymer, as well as on both de-pyruvated and de-acetylated samples, suggested a critical role for the acetyl group on the solution conformation of the polysaccharide. Molecular mechanics calculations indicated the possibility of intramolecular hydrogen bonding between acetyl substituents on the mannose and the C(2)OH group of the preceding saccharidic unit. NMR linewidth measurements, carried out as a function of temperature, on the low molecular weight de-pyruvated sample indicated different polymeric backbone dynamics in aqueous solutions with respect to that observed in 0.3 M NaCl solutions.


Subject(s)
Polysaccharides/chemistry , Pseudomonas/chemistry , Carbohydrate Sequence , Computer Simulation , Kinetics , Magnetic Resonance Spectroscopy , Molecular Conformation , Molecular Sequence Data , Molecular Structure , Osmolar Concentration , Sodium Chloride/metabolism , Temperature , Viscosity
8.
J Agric Food Chem ; 47(2): 799-802, 1999 Feb.
Article in English | MEDLINE | ID: mdl-10563971

ABSTRACT

Cutin in tomato peels was depolymerized in methanolic base to yield cutin monomers or a mixture of cutin oligomers. These products were isolated by typical solvent extraction methods or by precipitation, and the isolates were characterized by chromatographic and spectroscopic analyses. It was determined that the compositions of the isolates from both isolation procedures were similar, although solvent extraction gave higher yields. However, the precipitation method, which is easy to carry out and avoids the use of undesirable organic solvents, may be preferable in commercial processes for recovering these compounds.


Subject(s)
Membrane Lipids/isolation & purification , Solanum lycopersicum/chemistry , Gas Chromatography-Mass Spectrometry , Hydrolysis , Magnetic Resonance Spectroscopy , Membrane Lipids/chemistry , Methanol , Molecular Weight
9.
Eur J Biochem ; 251(3): 971-9, 1998 Feb 01.
Article in English | MEDLINE | ID: mdl-9490074

ABSTRACT

Pseudomonas flavescens strain B62 (NCPPB 3063) is a recently described bacterium isolated from walnut blight cankers. This strain has been designated as the type strain of a Pseudomonas rRNA group-I species. Strain B62 produced a mixture of two exopolysaccharides, differing in weight average relative molecular mass and composition. Only the most abundant exopolysaccharide (90% by mass), corresponding to the one with the lower molecular mass, was investigated by use of methylation analysis, partial acid hydrolysis, and NMR spectroscopy. The polysaccharide was depolymerised by the action of the cellulase produced by Penicillum funiculosum and the oligosaccharide obtained, corresponding to the repeating unit, was characterised by NMR spectroscopy and ion-spray mass spectrometry. The repeating unit of the B62 exopolysaccharide is [structure in text] where X is glucose (75%) or mannose (25%), and Lac is lactate. The O-acetyl groups are present only on 75% of the repeating units, and they are linked to the C6 of the hexose residues in non-stoichiometric amounts.


Subject(s)
Cellulase/metabolism , Oligosaccharides/chemistry , Penicillium/enzymology , Polysaccharides, Bacterial/chemistry , Pseudomonas/metabolism , Carbohydrate Conformation , Carbohydrate Sequence , Chromatography, Gas , Chromatography, Gel , Molecular Sequence Data , Nuclear Magnetic Resonance, Biomolecular , Oligosaccharides/isolation & purification , Polysaccharides, Bacterial/biosynthesis , Polysaccharides, Bacterial/isolation & purification , Pseudomonas/immunology
10.
Curr Microbiol ; 35(2): 124-8, 1997 Aug.
Article in English | MEDLINE | ID: mdl-9216888

ABSTRACT

Zymomonas mobilis (ATCC 29191) was grown either aerobically or anaerobically in the presence of 2% (wt/vol) glucose and 0, 3, or 6% (vol/vol) ethanol. The rates of growth and the composition of hopanoids, cellular fatty acids, and other lipids in the bacterial membranes were quantitatively analyzed. The bacterium grew in the presence of 3% and 6% ethanol and was more ethanol tolerant when grown anaerobically. In the absence of ethanol, hopanoids comprised about 30% (by mass) of the total cellular lipids. Addition of ethanol to the media caused complex changes in the levels of hopanoids and other lipids. However, there was not a significant increase in any of the hopanoid lipid classes as ethanol concentration was increased. As previously reported, vaccenic acid was the most abundant fatty acid in the lipids of Z. mobilis, and its high constitutive levels were unaffected by the variations in ethanol and oxygen concentrations. A cyclopropane fatty acid accounted for 2.6-6.4 wt % of the total fatty acids in all treatments.


Subject(s)
Ethanol/pharmacology , Lipid Metabolism , Oxygen/pharmacology , Zymomonas/drug effects , Zymomonas/metabolism , Aerobiosis , Anaerobiosis , Cell Membrane/metabolism , Chromatography, High Pressure Liquid , Fatty Acids/analysis , Fatty Acids/metabolism , Glucose/metabolism , Lipids/analysis , Molecular Structure , Triterpenes/analysis , Triterpenes/chemistry , Triterpenes/metabolism , Zymomonas/growth & development
11.
Can J Microbiol ; 43(5): 425-31, 1997 May.
Article in English | MEDLINE | ID: mdl-9165701

ABSTRACT

Pseudomonas marginalis is an important postharvest pathogen capable of causing soft rot in a wide variety of harvested fruits and vegetables. Following transposon mutagenesis, we isolated two groups of P. marginalis CY091 mutants deficient in production of pectate lyase (Pel) and soft-rot pathogenicity in plants. The first group, designated Pel-, was caused by the insertion of Tn5 into a pel structural gene, and the second group, designated LemA-, was caused by the insertion of Tn5 into a regulatory locus corresponding to the lemA gene previously identified in other Gram-negative bacteria. The LemA- mutants also exhibited alteration in colony morphology and showed deficiency in production of protease (Prt). A cosmid clone pCIC carrying the P. marginalis lemA gene was isolated and characterized. pCIC was capable of restoring Pel production and soft-rot pathogenicity in LemA- mutants of P. marginalis and Pseudomonas viridiflava, indicating that the function of lemA gene in these two pseudomonads was similar and interchangeable. Using MudI-mediated mutagenesis, we isolated a third group of P. marginalis mutants deficient in production of Pel, Prt, and soft-rot pathogenicity. Mutants in this group (designated GacA-1) contained an insertion of MudI in a locus corresponding to the gacA gene of P. viridiflava. Like LemA- mutants, GacA- mutants also exhibited alteration in colony morphology and showed deficiency in production of Pel and Prt. However, GacA- mutants produced much lower levels of levan and fluorescent pyoverdine siderophore than the wild type and LemA- mutants. These results provide the first genetic evidence that P. marginalis produces a single alkaline Pel for maceration of plant tissue and demonstrate that production of Pel, Prt, levan, and pyoverdin by this bacterium is mediated by the two-component lemA/gacA gene system.


Subject(s)
Bacterial Proteins/genetics , Genes, Bacterial , Polysaccharide-Lyases/biosynthesis , Pseudomonas/genetics , Transcription Factors/genetics , Cloning, Molecular , Food Microbiology , Fructans/biosynthesis , Gene Expression Regulation, Bacterial , Genetic Complementation Test , Mutagenesis, Insertional , Plant Diseases/microbiology , Restriction Mapping , Siderophores/biosynthesis
12.
Carbohydr Res ; 300(4): 323-7, 1997 May 19.
Article in English | MEDLINE | ID: mdl-9210299

ABSTRACT

An acidic exopolysaccharide was isolated from P. fluorescens strain H13. The structure of the polysaccharide repeating unit was determined using chemical methods and 1D and 2D NMR techniques. The repeating unit was characterized as a trisaccharide composed of D-glucose, 2-acetamido-2-deoxy-D-glucose and 4-O-acetyl-2-acetamido-2-deoxy-D-mannuronic acid.


Subject(s)
Polysaccharides/chemistry , Pseudomonas fluorescens/chemistry , Acetylglucosamine , Carbohydrate Conformation , Carbohydrate Sequence , Glucose , Magnetic Resonance Spectroscopy , Molecular Sequence Data , Repetitive Sequences, Nucleic Acid , Uronic Acids
14.
Carbohydr Res ; 275(2): 371-9, 1995 Oct 02.
Article in English | MEDLINE | ID: mdl-8529229

ABSTRACT

The structure of the acidic exopolysaccharide produced by the mushroom pathogen Pseudomonas "gingeri" strain Pf9, a bacterium which causes ginger blotch, was investigated by chemical analysis, mass spectrometry and 1D and 2D NMR spectroscopy. The polysaccharide consists of the linear trisaccharide repeating unit [formula: see text] where the cyclic pyruvic acetal groups at O-4 and O-6 of the mannopyranosyl residues have the S-configuration. Methylation analysis under neutral conditions and NMR data showed that the mannose residues are acetylated at O-2. This exopolysaccharide has the same structure as the E. coli K55 capsular polysaccharide and differs from the Klebsiella K5 capsular polysaccharide only in the position of acetylation (C-2 of the glucopyranose residue).


Subject(s)
Polysaccharides, Bacterial/chemistry , Pseudomonas/chemistry , Basidiomycota , Carbohydrate Conformation , Carbohydrate Sequence , Magnetic Resonance Spectroscopy , Mass Spectrometry , Methylation , Molecular Sequence Data , Molecular Structure , Monosaccharides/analysis
15.
Appl Environ Microbiol ; 61(2): 513-7, 1995 Feb.
Article in English | MEDLINE | ID: mdl-7574589

ABSTRACT

The acidic exopolysaccharides (EPSs) from 63 strains of mushroom production-associated fluorescent pseudomonads which were mucoid on Pseudomonas agar F medium (PAF) were isolated, partially purified, and characterized. The strains were originally isolated from discolored lesion which developed postharvest on mushroom (Agaricus bisporus) caps or from commercial lots of mushroom casing medium. An acidic galactoglucan, previously named marginalan, was produced by mucoid strains of the saprophyte Pseudomonas putida and the majority of mucoid strains of saprophytic P. fluorescens (biovars III and V) isolated from casing medium. One biovar II strain (J1) of P. fluorescens produced alginate, a copolymer of mannuronic and guluronic acids, and one strain (H13) produced an apparently unique EPS containing neutral and amino sugars. Of 10 strains of the pathogen "P. gingeri," the causal agent of mushroom ginger blotch, 8 gave mucoid growth on PAF. The "P. gingeri" EPS also was unique in containing both neutral sugar and glucuronic acid. Mucoid, weakly virulent strains of "P. reactans" produced either alginate or marginalan. All 10 strains of the pathogen P. tolaasii, the causal agent of brown blotch of mushrooms were nonnmucoid on PAF. Production of EPS by these 10 strains plus the 2 nonmucoid strains of "P. gingeri" also was negative on several additional solid media as well as in two broth media tested. The results support our previous studies indicating that fluorescent pseudomonads are a rich source of novel EPSs.


Subject(s)
Basidiomycota , Food Microbiology , Polysaccharides, Bacterial/biosynthesis , Pseudomonas/metabolism , Alginates/chemistry , Alginates/metabolism , Carbohydrate Sequence , Culture Media , Fluorescence , Fructans/biosynthesis , Fructans/chemistry , Glucuronic Acid , Hexuronic Acids , Molecular Sequence Data , Polysaccharides, Bacterial/chemistry , Pseudomonas/isolation & purification , Pseudomonas/pathogenicity , Pseudomonas fluorescens/isolation & purification , Pseudomonas fluorescens/metabolism , Pseudomonas fluorescens/pathogenicity , Pseudomonas putida/isolation & purification , Pseudomonas putida/metabolism , Pseudomonas putida/pathogenicity
16.
Anal Biochem ; 224(1): 293-301, 1995 Jan 01.
Article in English | MEDLINE | ID: mdl-7710085

ABSTRACT

Hopanoids and other lipids were extracted from Zymomonas mobilis and quantitatively analyzed by high-performance liquid chromatography. Previous methods for hopanoid analysis required derivatization of the hopanoids via periodate oxidation or acetylation. The current method employs a normal-phase silica gel column, a ternary gradient of hexane-isopropanol-water-triethylamine, and detection with a flame ionization detector. Three major hopanoid classes were separated and quantified by this new method, and together they comprised 30 to 40% of the total lipid in these cells. Mass spectrometry confirmed that chemical structures of these hopanoids were consistent with those previously proposed. In addition, several other common lipid classes (free fatty acids and six classes of common phospholipids), comprising the remaining 60 to 70% of the total lipids, were also separated and quantified. This new chromatographic method represents the first technique for the analysis and purification of intact hopanoids. This method should be useful for the analysis and purification of hopanoids from other bacterial species.


Subject(s)
Lipids/analysis , Triterpenes/analysis , Zymomonas/chemistry , Chromatography, High Pressure Liquid , Mass Spectrometry
18.
Mol Plant Microbe Interact ; 7(3): 391-400, 1994.
Article in English | MEDLINE | ID: mdl-8012049

ABSTRACT

Four pleiotropic mutants of Pseudomonas viridiflava strain PJ-08-6A that were deficient in production of both pectate lyase (Pel) and protease (Prt) were isolated following transposon mutagenesis. Unlike secretion-defective (Out-) mutants, these four showed no accumulation of enzymes within the cells. Southern hybridization analysis revealed that each mutant had Tn5 inserted in one of two EcoRI genomic fragments. These EcoRI fragments (5.2- and 6.3-kb) appeared to contain two distinct gene loci, designated repA and repB, which were required for production of extracellular enzymes in this bacterium. Cosmid clones carrying the functional repA and repB DNA fragments were identified in a genomic library of strain PJ-08-6A. After analysis of repA+ plasmids by restriction mapping and marker-exchange mutagenesis, the repA gene was located in a joint region between the 1.8-kb EcoRI-HindIII and 2.8-kb EcoRI fragments cloned. Nucleotide sequence analysis of the repA region revealed the presence of an open reading frame consisting of 2,790 bases. The RepA protein predicted from the DNA sequence showed 93% similarity in amino acid sequence to the LemA protein of P. syringae pv. syringae, which was previously identified as a member of a two-component global regulatory system. A plasmid carrying the lemA gene of P. syringae pv. syringae was capable of complementing the RepA- mutation in P. viridiflava. The functions of the repA and lemA genes thus appear to be similar and interchangeable. Mutants of P. viridiflava strain SF312A deficient in production of Pel, Prt, and the exopolysaccharide alginate also were identified.(ABSTRACT TRUNCATED AT 250 WORDS)


Subject(s)
Bacterial Proteins/genetics , Gene Expression Regulation , Polysaccharide-Lyases/genetics , Pseudomonas/genetics , Transcription Factors/genetics , Alginates/metabolism , Amino Acid Sequence , Base Sequence , Cloning, Molecular , DNA, Bacterial/genetics , Genes, Regulator , Glucuronic Acid , Hexuronic Acids , Molecular Sequence Data , Mutagenesis, Insertional , Pseudomonas/enzymology , Pseudomonas/pathogenicity , Sequence Alignment , Sequence Homology, Amino Acid
20.
FEMS Microbiol Lett ; 78(2-3): 151-7, 1992 Dec 01.
Article in English | MEDLINE | ID: mdl-1283378

ABSTRACT

Total genomic DNA of 13 pseudomonads representing rRNA homology groups I-IV were screened for sequences homologous to four Pseudomonas aeruginosa alginate (alg) genes by Southern hybridization. Biotinylated probes for three structural genes (algA, algC and algD) and one regulatory gene (algR1) were prepared. Genomic DNA of strains representing group I (P. syringae pv. glycinea, P. viridiflava and P. corrugata) hybridized with all four gene probes. Hybridizing fragments were of differing sizes, indicating that evolutionary divergence among group I members has occurred. P. corrugata has not been reported to synthesize alginate. Genomic DNA from representatives of groups II-IV gave no or very weak hybridization with the probes except for algC. This study indicates that the ability to produce alginic acid as an exopolysaccharide among the pseudomonads is restricted to members of rRNA homology group I in agreement with earlier physiological studies.


Subject(s)
Alginates/metabolism , Pseudomonas/genetics , RNA, Bacterial/genetics , RNA, Ribosomal/genetics , DNA Probes , DNA, Bacterial/genetics , Glucuronic Acid , Hexuronic Acids , Nucleic Acid Hybridization , Pseudomonas/classification , Pseudomonas/metabolism , Sequence Homology, Nucleic Acid , Species Specificity
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