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1.
Chemphyschem ; 15(17): 3824-31, 2014 Dec 01.
Article in English | MEDLINE | ID: mdl-25196062

ABSTRACT

Transient UV/Vis absorption spectroscopy is used to study the primary dynamics of the ring-A methyl imino ether of phycocyanobilin (PCB-AIE), which was shown to mimic the far-red absorbance of the Pfr chromophore in phytochromes (R. Micura, K. Grubmayr, Bioorg. Med. Chem. Lett.- 1994, 4, 2517-2522). After excitation at 615 nm, the excited electronic state is found to decay with τ1 =0.4 ps followed by electronic ground-state relaxation with τ2 =1.2 and τ3 =6.7 ps. Compared with phycocyanobilin (PCB), the initial kinetics of PCB-AIE is much faster. Thus, the lactim structure of PCB-AIE seems to be a suitable model that could not only explain the bathochromic shift in the ground-state absorption but also the short reaction of the Pfr as compared to the Pr chromophore in phytochrome. In addition, the equivalence of ring-A and ring-D lactim tautomers with respect to a red-shifted absorbance relative to the lactam tautomers is demonstrated by semiempirical calculations.

3.
J Phys Chem A ; 115(27): 7873-81, 2011 Jul 14.
Article in English | MEDLINE | ID: mdl-21678944

ABSTRACT

The light-driven NADPH:protochlorophyllide oxidoreductase (POR) is a key enzyme of chlorophyll biosynthesis in angiosperms. POR's unique requirement for light to become catalytically active makes the enzyme an attractive model to study the dynamics of enzymatic reactions in real time. Here, we use picosecond time-resolved fluorescence and femtosecond pump-probe spectroscopy to examine the influence of the protein environment on the excited-state dynamics of the substrate, protochlorophyllide (PChlide), in the enzyme/substrate (PChlide/POR) and pseudoternary complex including the nucleotide cofactor NADP(+) (PChlide/NADP(+)/ POR). In comparison with the excited-state processes of unbound PChlide, the lifetime of the thermally equilibrated S(1) excited state is lengthened from 3.4 to 4.4 and 5.4 ns in the PChlide/POR and PChlide/NADP(+)/POR complex, whereas the nonradiative rates are decreased by ∼30 and 40%, respectively. This effect is most likely due to the reduced probability of nonradiative decay into the triplet excited state, thus keeping the risk of photosensitized side reactions in the enzyme low. Further, the initial reaction path involves the formation of an intramolecular charge-transfer state (S(ICT)) as an intermediate product. From a strong blue shift in the excited-state absorption, it is concluded that the S(ICT) state is stabilized by local interactions with specific protein sites in the catalytic pocket. The possible relevance of this result for the catalytic reaction in the enzyme POR is discussed.


Subject(s)
Proteins/chemistry , Protochlorophyllide/chemistry , Biocatalysis/drug effects , Biocatalysis/radiation effects , Kinetics , Light , Oxidoreductases Acting on CH-CH Group Donors/chemistry , Photochemistry , Pigments, Biological/chemistry , Proteins/pharmacology , Protochlorophyllide/radiation effects
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