Microbial Signatures in COVID-19: Distinguishing Mild and Severe Disease via Gut Microbiota.

The COVID-19 pandemic, caused by the SARS-CoV-2 virus, has significantly impacted global healthcare, underscoring the importance of exploring the virus's effects on infected individuals beyond treatments and vaccines. Notably, recent findings suggest that SARS-CoV-2 can infect the gut, thereby altering the gut microbiota. This study aimed to analyze the gut microbiota composition differences between COVID-19 patients experiencing mild and severe symptoms. We conducted 16S rRNA metagenomic sequencing on fecal samples from 49 mild and 43 severe COVID-19 cases upon hospital admission. Our analysis identified a differential abundance of specific bacterial species associated with the severity of the disease. Severely affected patients showed an association with Enterococcus faecium, Akkermansia muciniphila, and others, while milder cases were linked to Faecalibacterium prausnitzii, Alistipes putredinis, Blautia faecis, and additional species. Furthermore, a network analysis using SPIEC-EASI indicated keystone taxa and highlighted structural differences in bacterial connectivity, with a notable disruption in the severe group. Our study highlights the diverse impacts of SARS-CoV-2 on the gut microbiome among both mild and severe COVID-19 patients, showcasing a spectrum of microbial responses to the virus. Importantly, these findings align, to some extent, with observations from other studies on COVID-19 gut microbiomes, despite variations in methodologies. The findings from this study, based on retrospective data, establish a foundation for future prospective research to confirm the role of the gut microbiome as a predictive biomarker for the severity of COVID-19.

Synthesis of ZnFe2O4 Nanospheres with Tunable Morphology for Lithium Storage.

ZnFe2O4 (ZFO) nanospheres with complex structures have been synthesized by a one-step simple solvothermal method using two different types of precursors-metal chlorides and nitrates -and were fully characterized by XRD, SEM, XPS, and EDS. The ZFO nanospheres synthesized from chloride salts (ZFO_C) were loose with a size range of 100-200 nm, while the ZFO nanospheres synthesized from nitrate salts (ZFO_N) were dense with a size range of 300-500 nm but consisted of smaller nanoplates. The different morphologies may be caused by the different hydrolysis rates and different stabilizing effects of chloride and nitrate ions interacting with the facets of forming nanoparticles. Electrochemical tests of nitrate-based ZFO nanospheres as anode materials for lithium-ion batteries demonstrated their higher cyclic stability. The ZFO_C and ZFO_N samples have initial specific discharge/charge capacities of 1354/1020 and 1357/954 mAh∙g-1, respectively, with coulombic efficiencies of 75% and 71%. By the 100th cycle, ZFO_N has a capacity of 276 mAh∙g-1, and for ZFO_C, only 210 mAh∙g-1 remains after 100 cycles.

Vanadium Oxide-Poly(3,4-ethylenedioxythiophene) Nanocomposite as High-Performance Cathode for Aqueous Zn-Ion Batteries: The Structural and Electrochemical Characterization.

In this work the nanocomposite of vanadium oxide with conducting polymer poly(3,4-ethylenedioxythiophene) (VO@PEDOT) was obtained by microwave-assisted hydrothermal synthesis. The detailed study of its structural and electrochemical properties as cathode of aqueous zinc-ion battery was performed by scanning electron microscopy, energy dispersive X-ray analysis, X-ray diffraction analysis, X-ray photoelectron spectroscopy, thermogravimetric analysis, cyclic voltammetry, galvanostatic charge-discharge, and electrochemical impedance spectroscopy. The initial VO@PEDOT composite has layered nanosheets structure with thickness of about 30-80 nm, which are assembled into wavy agglomerated thicker layers of up to 0.3-0.6 µm. The phase composition of the samples was determined by XRD analysis which confirmed lamellar structure of vanadium oxide V10O24∙12H2O with interlayer distance of about 13.6 Å. The VO@PEDOT composite demonstrates excellent electrochemical performance, reaching specific capacities of up to 390 mA∙h∙g-1 at 0.3 A∙g-1. Moreover, the electrodes retain specific capacity of 100 mA∙h∙g-1 at a high current density of 20 A∙g-1. The phase transformations of VO@PEDOT electrodes during the cycling were studied at different degrees of charge/discharge by using ex situ XRD measurements. The results of ex situ XRD allow us to conclude that the reversible zinc ion intercalation occurs in stable zinc pyrovanadate structures formed during discharge.

Prevalence and Risk of Dental Erosion in Patients with Gastroesophageal Reflux Disease: A Meta-Analysis.

AIM: The present paper aims to systematize data concerning the prevalence and risk of dental erosion (DE) in adult patients with gastroesophageal reflux disease (GERD) compared to controls. MATERIALS AND METHODS: Core electronic databases, i.e., MEDLINE/PubMed, EMBASE, Cochrane, Google Scholar, and the Russian Science Citation Index (RSCI), were searched for studies assessing the prevalence and risk of DE in adult GERD patients with publication dates ranging from 1 January 1985 to 20 January 2022. Publications with detailed descriptive statistics (the total sample size of patients with GERD, the total sample size of controls (if available), the number of patients with DE in the sample of GERD patients, the number of patients with DE in the controls (if available)) were selected for the final analysis. RESULTS: The final analysis included 28 studies involving 4379 people (2309 GERD patients and 2070 control subjects). The pooled prevalence of DE was 51.524% (95 CI: 39.742-63.221) in GERD patients and 21.351% (95 CI: 9.234-36.807) in controls. An association was found between the presence of DE and GERD using the random-effects model (OR 5.000, 95% CI: 2.995-8.345; I2 = 79.78%) compared with controls. When analyzing studies that only used validated instrumental methods for diagnosing GERD, alongside validated DE criteria (studies that did not specify the methodologies used were excluded), a significant association between the presence of DE and GERD was revealed (OR 5.586, 95% CI: 2.311-13.503; I2 = 85.14%). CONCLUSION: The meta-analysis demonstrated that DE is quite often associated with GERD and is observed in about half of patients with this extremely common disease of the upper gastrointestinal tract.

Ultrahigh vacuum packaging and surface cleaning for quantum devices.

We describe design, implementation, and performance of an ultra-high vacuum (UHV) package for superconducting qubit chips or other surface sensitive quantum devices. The UHV loading procedure allows for annealing, ultra-violet light irradiation, ion milling, and surface passivation of quantum devices before sealing them into a measurement package. The package retains vacuum during the transfer to cryogenic temperatures by active pumping with a titanium getter layer. We characterize the treatment capabilities of the system and present measurements of flux tunable qubits with an average T1 = 84 µs and T2 echo=134µs after vacuum-loading these samples into a bottom loading dilution refrigerator in the UHV-package.

Free-standing Li+-conductive films based on PEO-PVDF blends.

Solid electrolytes are of high interest for the development of advanced electrochemical energy storage devices with all-solid-state architectures. Here, we report the fabrication of the electrolyte membranes based on LiTFSI (LiN(CF3SO2)2) and PEO-PVDF blends with improved properties. We show that addition of PVDF enables preparation of free-standing films of the compositions within the so called "crystallinity gap" of the LiTFSI-PEO system known to provide high ion conductivity. We show that optimal PVDF content enables preparation of the films with reasonable elastic modulus and high ionic conductivity of about 0.3 mS cm-1 at 60 °C and about 0.1 mS cm-1 at room-temperature. Combining FTIR spectroscopy, XRD and DSC measurements we show that a noticeable fraction of PVDF remains crystalline and enhances the mechanical properties of the material, and at the same time it additionally promotes LiTFSI dissociation and disordering. Density functional theory calculations showed that the Li+-PEO-PVDF complexation energy magnitude is almost as high as that of Li-PEO complexes, thus the salt dissociation ability can be retained in spite of the introduction of the substantial amounts of PVDF required for mechanical stability.

Geographical variation in the prevalence of obesity and metabolic syndrome among US adolescents.

BACKGROUND: Among adolescents, obesity and the metabolic syndrome (MetS) contribute to adult cardiovascular disease risk. By parent report, obesity prevalence in the USA was highest in the South. OBJECTIVES: The aim of this study was to determine the prevalence of obesity and MetS by US division and region. METHODS: We used in-person assessment of 4600 US adolescents age 12-19 years participating in the National Health and Nutrition Examination Survey, 1999-2014. RESULTS: Prevalence of obesity was highest in the East North Central division (21.3%) and the three census divisions in the South (all >20%), compared with lower prevalence in the Mountain and New England divisions (both <15%). MetS was most prevalent in the two divisions in the Midwest (both >10%) and lowest in the Mountain and New England divisions (both <6%). For the amount of obesity in each division, there was a higher prevalence of MetS in the West North Central division (obesity 17.1%, MetS 13.6%) and lower prevalence in the East South Central (obesity 23.5%, MetS 6.6%) and South Atlantic divisions (obesity 20.4%, MetS 6.7%). CONCLUSIONS: The degree of obesity-related and MetS-related risk among adolescents in the Midwest is higher than suggested from previous parent-reported weight data. The Midwest and South may warrant particularly strong cardiovascular disease prevention efforts.

Characterization of adult obesity in Florida using the OneFlorida clinical research consortium.

INTRODUCTION: With obesity rates and obesity-related healthcare costs increasing, policy makers must understand the scope of obesity across populations. OBJECTIVE: This study sought to characterize adult obesity using electronic health records (EHRs) available from a statewide clinical data research network, the OneFlorida Clinical Research Consortium, which contains claims and EHR data from over 12 million patients in Florida. The primary aim was to compare EHR-based Florida obesity rates with those rates obtained from the Behavioural Risk Factor Surveillance System (BRFSS). METHODS: Body mass index from OneFlorida patient data (2012-2016) was used to characterize obesity among adults 20-79 years old. Obesity rates from both OneFlorida and BRFSS (2013) were reported by demographics and by county. RESULTS: Among the 1,344,015 adults in OneFlorida with EHR data and who met inclusion criteria, the obesity rate was 37.1%. Women had higher obesity rates compared with men. Obesity rates varied within racial/ethnic groups, with the highest rate among African-Americans (45.7%). Obesity rates from OneFlorida were consistently higher than those found in BRFSS (overall 27.8%). CONCLUSIONS: Utilizing clinical big data available through hospital system and health partner collaborations provides an important view of the extent of obesity. Although these data are available only from healthcare users, they are large in scope, directly measured and are available sooner than commonly used national data sources.

Measurement of geometric dephasing using a superconducting qubit.

A quantum system interacting with its environment is subject to dephasing, which ultimately destroys the information it holds. Here we use a superconducting qubit to experimentally show that this dephasing has both dynamic and geometric origins. It is found that geometric dephasing, which is present even in the adiabatic limit and when no geometric phase is acquired, can either reduce or restore coherence depending on the orientation of the path the qubit traces out in its projective Hilbert space. It accompanies the evolution of any system in Hilbert space subjected to noise.

Many-body interactions with tunable-coupling transmon qubits.

The efficient implementation of many-body interactions in superconducting circuits allows for the realization of multipartite entanglement and topological codes, as well as the efficient simulation of highly correlated fermionic systems. We propose the engineering of fast multiqubit interactions with tunable transmon-resonator couplings. This dynamics is obtained by the modulation of magnetic fluxes threading superconducting quantum interference device loops embedded in the transmon devices. We consider the feasibility of the proposed implementation in a realistic scenario and discuss potential applications.

Experimental realization of non-Abelian non-adiabatic geometric gates.

The geometric aspects of quantum mechanics are emphasized most prominently by the concept of geometric phases, which are acquired whenever a quantum system evolves along a path in Hilbert space, that is, the space of quantum states of the system. The geometric phase is determined only by the shape of this path and is, in its simplest form, a real number. However, if the system has degenerate energy levels, then matrix-valued geometric state transformations, known as non-Abelian holonomies--the effect of which depends on the order of two consecutive paths--can be obtained. They are important, for example, for the creation of synthetic gauge fields in cold atomic gases or the description of non-Abelian anyon statistics. Moreover, there are proposals to exploit non-Abelian holonomic gates for the purposes of noise-resilient quantum computation. In contrast to Abelian geometric operations, non-Abelian ones have been observed only in nuclear quadrupole resonance experiments with a large number of spins, and without full characterization of the geometric process and its non-commutative nature. Here we realize non-Abelian non-adiabatic holonomic quantum operations on a single, superconducting, artificial three-level atom by applying a well-controlled, two-tone microwave drive. Using quantum process tomography, we determine fidelities of the resulting non-commuting gates that exceed 95 per cent. We show that two different quantum gates, originating from two distinct paths in Hilbert space, yield non-equivalent transformations when applied in different orders. This provides evidence for the non-Abelian character of the implemented holonomic quantum operations. In combination with a non-trivial two-quantum-bit gate, our method suggests a way to universal holonomic quantum computing.

Geometric phase and nonadiabatic effects in an electronic harmonic oscillator.

Steering a quantum harmonic oscillator state along cyclic trajectories leads to a path-dependent geometric phase. Here we describe its experimental observation in an electronic harmonic oscillator. We use a superconducting qubit as a nonlinear probe of the phase, which is otherwise unobservable due to the linearity of the oscillator. We show that the geometric phase is, for a variety of cyclic paths, proportional to the area enclosed in the quadrature plane. At the transition to the nonadiabatic regime, we study corrections to the phase and dephasing of the qubit caused by qubit-resonator entanglement. In particular, we identify parameters for which this dephasing mechanism is negligible even in the nonadiabatic regime. The demonstrated controllability makes our system a versatile tool to study geometric phases in open quantum systems and to investigate their potential for quantum information processing.

Benchmarking a quantum teleportation protocol in superconducting circuits using tomography and an entanglement witness.

Teleportation of a quantum state may be used for distributing entanglement between distant qubits in quantum communication and for quantum computation. Here we demonstrate the implementation of a teleportation protocol, up to the single-shot measurement step, with superconducting qubits coupled to a microwave resonator. Using full quantum state tomography and evaluating an entanglement witness, we show that the protocol generates a genuine tripartite entangled state of all three qubits. Calculating the projection of the measured density matrix onto the basis states of two qubits allows us to reconstruct the teleported state. Repeating this procedure for a complete set of input states we find an average output state fidelity of 86%.

Driving Rydberg-Rydberg transitions from a coplanar microwave waveguide.

The coherent interaction between ensembles of helium Rydberg atoms and microwave fields in the vicinity of a solid-state coplanar waveguide is reported. Rydberg-Rydberg transitions, at frequencies between 25 and 38 GHz, have been studied for states with principal quantum numbers in the range 30-35 by selective electric-field ionization. An experimental apparatus cooled to 100 K was used to reduce effects of blackbody radiation. Inhomogeneous, stray electric fields emanating from the surface of the waveguide have been characterized in frequency- and time-resolved measurements and coherence times of the Rydberg atoms on the order of 250 ns have been determined. These results represent a key element in the development of an experimental architecture to interface Rydberg atoms with solid-state devices.

Observation of entanglement between itinerant microwave photons and a superconducting qubit.

A localized qubit entangled with a propagating quantum field is well suited to study nonlocal aspects of quantum mechanics and may also provide a channel to communicate between spatially separated nodes in a quantum network. Here, we report the on-demand generation and characterization of Bell-type entangled states between a superconducting qubit and propagating microwave fields composed of zero-, one-, and two-photon Fock states. Using low noise linear amplification and efficient data acquisition we extract all relevant correlations between the qubit and the photon states and demonstrate entanglement with high fidelity.

Observation of two-mode squeezing in the microwave frequency domain.

Continuous variable entanglement between two modes of a radiation field is usually studied at optical frequencies. Here we demonstrate experiments that show the entanglement between microwave photons of different energy in a broadband squeezed beam. We use a Josephson parametric amplifier to generate the two-mode correlated state and detect all four quadrature components simultaneously in a two-channel heterodyne setup using amplitude detectors. Analyzing two-dimensional phase space histograms for all possible pairs of quadratures allows us to determine the full covariance matrix, which is in good agreement with the one expected for a two-mode squeezed state.

Observation of resonant photon blockade at microwave frequencies using correlation function measurements.

Creating a train of single photons and monitoring its propagation and interaction is challenging in most physical systems, as photons generally interact very weakly with other systems. However, when confining microwave frequency photons in a transmission line resonator, effective photon-photon interactions can be mediated by qubits embedded in the resonator. Here, we observe the phenomenon of photon blockade through second-order correlation function measurements. The experiments clearly demonstrate antibunching in a continuously pumped source of single microwave photons measured by using microwave beam splitters, linear amplifiers, and quadrature amplitude detectors. We also investigate resonance fluorescence and Rayleigh scattering in Mollow-triplet-like spectra.

Cavity quantum electrodynamics with separate photon storage and qubit readout modes.

We present the realization of a cavity quantum electrodynamics setup in which photons of strongly different lifetimes are engineered in different harmonic modes of the same cavity. We achieve this in a superconducting transmission line resonator with superconducting qubits coupled to the different modes. One cavity mode is strongly coupled to a detection line for qubit state readout, while a second long lifetime mode is used for photon storage and coherent quantum operations. We demonstrate sideband-based measurement of photon coherence, generation of n photon Fock states and the scaling of the sideband Rabi frequency with square root of n using a scheme that may be extended to realize sideband-based two-qubit logic gates.

Quantum-to-classical transition in cavity quantum electrodynamics.

The quantum properties of electromagnetic, mechanical or other harmonic oscillators can be revealed by investigating their strong coherent coupling to a single quantum two level system in an approach known as cavity quantum electrodynamics (QED). At temperatures much lower than the characteristic energy level spacing the observation of vacuum Rabi oscillations or mode splittings with one or a few quanta asserts the quantum nature of the oscillator. Here, we study how the classical response of a cavity QED system emerges from the quantum one when its thermal occupation-or effective temperature-is raised gradually over 5 orders of magnitude. In this way we explore in detail the continuous quantum-to-classical crossover and demonstrate how to extract effective cavity field temperatures from both spectroscopic and time-resolved vacuum Rabi measurements.

Control and tomography of a three level superconducting artificial atom.

A number of superconducting qubits, such as the transmon or the phase qubit, have an energy level structure with small anharmonicity. This allows for convenient access of higher excited states with similar frequencies. However, special care has to be taken to avoid unwanted higher-level populations when using short control pulses. Here we demonstrate the preparation of arbitrary three level superposition states using optimal control techniques in a transmon. Performing dispersive readout, we extract the populations of all three levels of the qutrit and study the coherence of its excited states. Finally we demonstrate full quantum state tomography of the prepared qutrit states and evaluate the fidelities of a set of states, finding on average 95%.