Size-strain separation in diffraction line profile analysis.

Separation of size and strain effects on diffraction line profiles has been studied in a round robin involving laboratory instruments and synchrotron radiation beamlines operating with different radiation, optics, detectors and experimental configurations. The studied sample, an extensively ball milled iron alloy powder, provides an ideal test case, as domain size broadening and strain broadening are of comparable size. The high energy available at some synchrotron radiation beamlines provides the best conditions for an accurate analysis of the line profiles, as the size-strain separation clearly benefits from a large number of Bragg peaks in the pattern; high counts, reliable intensity values in low-absorption conditions, smooth background and data collection at different temperatures also support the possibility to include diffuse scattering in the analysis, for the most reliable assessment of the line broadening effect. However, results of the round robin show that good quality information on domain size distribution and microstrain can also be obtained using standard laboratory equipment, even when patterns include relatively few Bragg peaks, provided that the data are of good quality in terms of high counts and low and smooth background.

Identification, Collection, and Preservation of Veterinary Forensic Evidence: On Scene and During the Postmortem Examination.

Although it is the obligation of the veterinary forensic pathologist to be competent in identifying, collecting, and preserving evidence from the body, it is also necessary for them to understand the relevance of conditions on the crime scene. The body is just one piece of the puzzle that needs to be considered when determining the cause of death. The information required for a complete postmortem analysis should also include details of the animal's environment and items of evidence present on the crime scene. These factors will assist the veterinary forensic pathologist in the interpretation of necropsy findings. Therefore, the veterinary forensic pathologist needs to have a basic understanding of how the crime scene is processed, as well as the role of the forensic veterinarian on scene. In addition, the veterinary forensic pathologist must remain unbiased, necessitating an understanding of evidence maintenance and authentication.

Human insulin polymorphism upon ligand binding and pH variation: the case of 4-ethylresorcinol.

This study focuses on the effects of the organic ligand 4-ethylresorcinol on the crystal structure of human insulin using powder X-ray crystallography. For this purpose, systematic crystallization experiments have been conducted in the presence of the organic ligand and zinc ions within the pH range 4.50-8.20, while observing crystallization behaviour around the isoelectric point of insulin. High-throughput crystal screening was performed using a laboratory X-ray diffraction system. The most representative samples were selected for synchrotron X-ray diffraction measurements, which took place at the European Synchrotron Radiation Facility (ESRF) and the Swiss Light Source (SLS). Four different crystalline polymorphs have been identified. Among these, two new phases with monoclinic symmetry have been found, which are targets for the future development of microcrystalline insulin drugs.

Novel crystalline phase and first-order phase transitions of human insulin complexed with two distinct phenol derivatives.

The primary focus of the present work is the study of the effects that two ligands and the crystallization pH have on the crystalline forms of human insulin. For this purpose, human insulin (HI) was co-crystallized with two distinct phenolic derivatives: the organic ligands meta-cresol (m-cresol) and 4-nitrophenol. The formation of polycrystalline precipitates was then followed by means of structural characterization of the individual specimens in terms of unit-cell symmetry and parameters. In both cases, two different polymorphs were identified via X-ray powder diffraction measurements, the first of hexagonal symmetry (R3 space group) at higher pH values and the second of monoclinic symmetry (space group P21) with unit-cell parameters a = 87.4282 (5), b = 70.5020 (3), c = 48.3180 (4) Å, ß = 106.8958 (4)°, the latter of which to our knowledge has never been observed before.

Revision of the structure of Cs2CuSi5O12 leucite as orthorhombic Pbca.

The crystal structure of a hydrothermally synthesized leucite analogue Cs(2)CuSi(5)O(12) has been determined and refined using the Rietveld method from high-resolution synchrotron X-ray and neutron powder diffraction data. This structure is based on the topology and cation-ordering scheme of the Pbca leucite structure of Cs(2)CdSi(5)O(12), and exhibits five ordered Si sites and one ordered Cu tetrahedrally coordinated (T) site. This structure for Cs(2)CuSi(5)O(12) is topologically identical to other known leucite structures and is different from that originally proposed by Heinrich & Baerlocher [(1991), Acta Cryst. C47, 237-241] in the tetragonal space group P4(1)2(1)2. The crystal structure of a dry-synthesized leucite analogue Cs(2)CuSi(5)O(12) has also been refined; this has the Ia3d cubic pollucite structure with disordered T sites.

Shortest path analysis using partial correlations for classifying gene functions from gene expression data.

MOTIVATION: Gaussian graphical models (GGMs) are a popular tool for representing gene association structures. We propose using estimated partial correlations from these models to attach lengths to the edges of the GGM, where the length of an edge is inversely related to the partial correlation between the gene pair. Graphical lasso is used to fit the GGMs and obtain partial correlations. The shortest paths between pairs of genes are found. Where terminal genes have the same biological function intermediate genes on the path are classified as having the same function. We validate the method using genes of known function using the Rosetta Compendium of yeast (Saccharomyces Cerevisiae) gene expression profiles. We also compare our results with those obtained using a graph constructed using correlations. RESULTS: Using a partial correlation graph, we are able to classify approximately twice as many genes to the same level of accuracy as when using a correlation graph. More importantly when both methods are tuned to classify a similar number of genes, the partial correlation approach can increase the accuracy of the classifications.

The High Resolution Powder Diffraction Beam Line at ESRF.

The optical design and performance of the high-resolution powder diffraction beam line BM16 at ESRF are discussed and illustrated. Some recent studies carried out on BM16 are described, including crystal structure solution and refinement, anomalous scattering, in situ measurements, residual strain in engineering components, investigation of microstructure, and grazing-incidence diffraction from surface layers. The beam line is built on a bending magnet, and operates in the energy range from 5 keV to 40 keV. After the move to an undulator source in 2002, it will benefit from an extented energy range up to 60 keV and increased flux and resolution. It is anticipated that enhancements to the data quality will be achieved, leading to the solution of larger crystal structures, and improvements in the accuracy of refined structures. The systematic exploitation of anisotropic thermal expansion will help reduce the effects of peak overlap in the analysis of powder diffraction data.

Decomposition of silver carbonate; the crystal structure of two high-temperature modifications of Ag(2)CO(3).

High-resolution powder diffraction was used to study the thermal transformation of silver carbonate. A sample of Ag(2)CO(3) was heated in a capillary under 4.5 atm CO(2) pressure. The decomposition temperature of silver carbonate to silver oxide is thereby increased, allowing high-resolution synchrotron X-ray powder diffraction patterns of the two high-temperature phases of Ag(2)CO(3) to be collected. The structure of the low-temperature (lt) phase was confirmed, and the structures of the two high-temperature phases were determined by direct methods and refined using the Rietveld method: lt-Ag(2)CO(3) (295 K) P2(1)/m, z = 2, a = 4.8521(2) A, b = 9.5489(4) A, c = 3.2536(1) A, beta = 91.9713(3) degrees; beta-Ag(2)CO(3) (453 K) P31c, z = 6, a = 9.1716(4) A, c = 6.5176(3) A; alpha-Ag(2)CO(3) (476 K) P6 macro 2m, z = 3, a = 9.0924(4) A, c = 3.3249(1) A. In addition, thermal expansion properties, anisotropic microstrain distributions, and thermal transformations of the three silver carbonate phases and silver oxide are described.

Size-dependent grain-growth kinetics observed in nanocrystalline Fe.

Measurements of grain growth in nanocrystalline Fe reveal a linear dependence of the grain size on annealing time, contradicting studies in coarser-grained materials, which find a parabolic (or power-law) dependence. When the grain size exceeds approximately 150 nm, a smooth transition from linear to nonlinear growth kinetics occurs, suggesting that the rate-controlling mechanism for grain growth depends on the grain size. The linear-stage growth rate agrees quantitatively with a model in which boundary migration is controlled by the redistribution of excess volume localized in the boundary cores.

Crystal and molecular structures of rhenium heptafluoride.

Rhenium heptafluoride, ReF(7), is one of only two stable binary compounds MX(7) with a heptacoordinated metal atom M and halide atom X. Its low-temperature crystal structure, as determined by high-resolution powder neutron diffraction, reveals the molecular structure, which has been the subject of speculation and debate for many years. Here it is shown within experimental error that at 1.5 kelvin the lowest energy configuration of ReF(7) has symmetry Cs (m) and is a distorted pentagonal bipyramid. The deviation of the two axial Re-F bonds from collinear and the puckering of the ring of equatorial fluorine atoms are similar to what has been postulated as one of the conformations of the pseudorotational motion observed at higher temperatures.

Remote sensing of gas concentrations in smokestack emissions.

A measurement technique is discussed that allows for remote sensing of polluting gases that are emitted together with the water droplets in a steam plume. Infrared laser radiation is backscattered from the droplets. As wavelength of the radiation is varied, resonant absorption in the gases diminishes the backscatter signal; this may be quantitatively related the Concentration of specific gases. The backscatter arrangement makes possible the construction of a compact, single-ended, remote sensing instrument. Feasibility of this concept has been demonstrated in a laboratory experiment where a laser beam at 3.391 microm and 4.217 microm was scattered from a steam plume containing controlled amounts of CH(4) and CO(2).