Chronological dataset of soil respiration fluxes from a seasonally dry forest in Northwest México.

Soil respiration (CO2 emission to the atmosphere from soils) is an important component of the global carbon cycle. In highly seasonal ecosystems the magnitudes and the underlying mechanisms that control soil respiration (RS) are still poorly understood and measurements are underrepresented in the global flux community. In this dataset, systematic and monthly measurements of RS were conducted with an infrared gas analyzer coupled to a static chamber during 2015, 2016, 2017 and 2019 in a tropical dry forest with a land use history from Northwestern México. These data is useful to assess the intra-annual and seasonal variations of RS at a highly seasonal dry forests and serves as a base line to benchmark soil carbon models in regional and global contexts. The data presented supports the research manuscript: "Soil respiration is influenced by seasonality, forest succession and contrasting biophysical controls in a tropical dry forest in Northwestern Mexico" from Vargas-Terminel et al. [1].

Seasonal controlling factors of CO2 exchange in a semiarid shrubland in the Chihuahuan Desert, Mexico.

The still significant uncertainties associated with the future capacity of terrestrial systems to mitigate climate change are linked to the lack of knowledge of the biotic and abiotic processes that regulate CO2 net ecosystem exchange (NEE) in space/time. Mainly, rates and controls of CO2 exchange from arid ecosystems, despite dominating the global trends in interannual variability of the terrestrial CO2 sink capacity, are probably the most poorly understood of all. We present a study on rates and controls of CO2 exchange measured with the eddy covariance (EC) technique in the Chihuahuan Desert in the Northeast of Mexico, to understand how the environmental controls of the NEE switch throughout the year using a multilevel approach. Since this is a water-limited ecosystem, the hydroecological year, based on the last precipitation and the decay of air temperature, was used to compare the wet (from May 16 to October 30, 2019) and dry (November 1, 2019 to May 15, 2020) seasons' controlling mechanisms, both at diurnal and nocturnal times. Annual NEE was -303.5 g C m-2, with a cumulative Reco of 537.7 g C m-2 and GPP of 841.3 g C m-2. NEE showed radiation, temperature, and soil moisture sensitivity along the day, however, shifts in these controls along the year and between seasons were identified. The winter precipitations during the dry season led to fast C release followed by lagged C uptake. Despite this flux pulse, the ecosystem was a net sink throughout most of the year because the local vegetation is well adapted to grow and uptake C under these arid conditions, even during the dry season. Understanding the controls of the sink-source shifts is relevant since the predictions for future climate include changes in the precipitation patterns.

The effect of conventional and sustainable agricultural management practices on carbon and water fluxes in a Mexican semi-arid region.

Background: Agriculture is essential for food security. However, conventional agriculture alters the water and carbon cycle and soil properties. We investigated the effect of conventional management (CM) and sustainable management (SM) on the carbon and water cycle in crops of nopal (Np) and wheat (Wh). Methods: A micrometeorological eddy covariance tower was installed to measure water use through evapotranspiration (ET) and the net exchange of CO2 during the crop's development. Gross primary productivity (GPP), water use efficiency (WUE), and soil properties were obtained. Results: The results showed that both agricultural managements influenced the carbon flux of the ecosystem, with a lower GPP and Reco in the nopal field (1.85 and 0.99 mmol C m-2 s-1, respectively), compared to the wheat field (6.34 and 1.8 mmol C m-2 s-1, respectively). It was mainly attributed to the metabolic plant differences, phenological stages, and wheat biomass developed during the winter. On the other hand, the accumulated ET in the SM-Wh plots was lower than SM-Np. Therefore, the crops subjected to sustainable practices use water more efficiently with 1.42 and 1.03 g C m-3 H2O for nopal and wheat, respectively. In regard to soil properties, it was observed that tillage alters microbial activity affecting organic matter and carbon. It can be concluded that the differences in agricultural management for both crops altered the carbon and water cycle and soil quality. In addition, implementing good agricultural practices allows more efficient use of water by the plant, higher retention of water in the soil, and less ET.

Habitat fragmentation is linked to cascading effects on soil functioning and CO2 emissions in Mediterranean holm-oak-forests.

We studied key mechanisms and drivers of soil functioning by analyzing soil respiration and enzymatic activity in Mediterranean holm oak forest fragments with different influence of the agricultural matrix. For this, structural equation models (SEM) were built including data on soil abiotic (moisture, temperature, organic matter, pH, nutrients), biotic (microbial biomass, bacterial and fungal richness), and tree-structure-related (basal area) as explanatory variables of soil enzymatic activity and respiration. Our results show that increased tree growth induced by forest fragmentation in scenarios of high agricultural matrix influence triggered a cascade of causal-effect relations, affecting soil functioning. On the one hand, soil enzymatic activity was strongly stimulated by the abiotic (changes in pH and microclimate) and biotic (microbial biomass) modifications of the soil environment arising from the increased tree size and subsequent soil organic matter accumulation. Soil CO2 emissions (soil respiration), which integrate releases from all the biological activity occurring in soils (autotrophic and heterotrophic components), were mainly affected by the abiotic (moisture, temperature) modifications of the soil environment caused by trees. These results, therefore, suggest that the increasing fragmentation of forests may profoundly impact the functioning of the plant-soil-microbial system, with important effects over soil CO2 emissions and nutrient cycling at the ecosystem level. Forest fragmentation is thus revealed as a key albeit neglected factor for accurate estimations of soil carbon dynamics under global change scenarios.