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1.
Acta Crystallogr D Struct Biol ; 78(Pt 10): 1249-1258, 2022 Oct 01.
Article in English | MEDLINE | ID: mdl-36189744

ABSTRACT

The static structure factor and the undulation dynamics of a solid-supported membrane stack have previously been calculated by Romanov and Ul'yanov [Romanov & Ul'yanov (2002). Phys. Rev. E, 66, 061701]. Based on this prior work, the calculation has been extended to cover the membrane dynamics, i.e. the intermediate scattering function as a Fourier transform of the van Hove correlation function of the membrane stack. Fortran code which calculates the intermediate scattering function for a membrane stack on a solid support is presented. It allows the static and dynamic scattering functions to be calculated according to the derivation of Romanov and Ul'yanov. The physical properties of supported phospholipid bilayers can be examined in this way and the results can be directly compared with results obtained from grazing-incidence neutron spin-echo spectroscopy experiments.


Subject(s)
Lipid Bilayers , Neutron Diffraction , Lipid Bilayers/chemistry , Phospholipids/chemistry , Spectrum Analysis
2.
Biochim Biophys Acta Gen Subj ; 1861(1 Pt B): 3693-3699, 2017 Jan.
Article in English | MEDLINE | ID: mdl-27155578

ABSTRACT

BACKGROUND: The acoustic levitation technique is a useful sample handling method for small solid and liquids samples, suspended in air by means of an ultrasonic field. This method was previously used at synchrotron sources for studying pharmaceutical liquids and protein solutions using x-ray diffraction and small angle x-ray scattering (SAXS). METHODS: In this work we combined for the first time this containerless method with small angle neutron scattering (SANS) and synchrotron radiation circular dichroism (SRCD) to study the structural behavior of proteins in solutions during the water evaporation. SANS results are also compared with SAXS experiments. RESULTS: The aggregation behavior of 45µl droplets of lysozyme protein diluted in water was followed during the continuous increase of the sample concentration by evaporating the solvent. The evaporation kinetics was followed at different drying stage by SANS and SAXS with a good data quality. In a prospective work using SRCD, we also studied the evolution of the secondary structure of the myoglobin protein in water solution in the same evaporation conditions. CONCLUSIONS: Acoustic levitation was applied for the first time with SANS and the high performances of the used neutron instruments made it possible to monitor fast container-less reactions in situ. A preliminary work using SRCD shows the potentiality of its combination with acoustic levitation for studying the evolution of the protein structure with time. GENERAL SIGNIFICANCE: This multi-techniques approach could give novel insights into crystallization and self-assembly phenomena of biological compound with promising potential applications in pharmaceutical, food and cosmetics industry. This article is part of a Special Issue entitled "Science for Life" Guest Editor: Dr. Austen Angell, Dr. Salvatore Magazù and Dr. Federica Migliardo.


Subject(s)
Acoustics , Circular Dichroism , Proteins/analysis , Scattering, Small Angle , Synchrotrons , Animals , Chickens , Horses , Muramidase/analysis , Myoglobin/analysis , Neutron Diffraction , Solutions , Spectrum Analysis , Water/chemistry
3.
Phys Rev Lett ; 113(21): 215701, 2014 Nov 21.
Article in English | MEDLINE | ID: mdl-25479506

ABSTRACT

In this work we investigate, by means of elastic neutron scattering, the pressure dependence of mean square displacements (MSD) of hydrogen atoms of deeply cooled water confined in the pores of a three-dimensional disordered SiO2 xerogel; experiments have been performed at 250 and 210 K from atmospheric pressure to 1200 bar. The "pressure anomaly" of supercooled water (i.e., a mean square displacement increase with increasing pressure) is observed in our sample at both temperatures; however, contrary to previous simulation results and to the experimental trend observed in bulk water, the pressure effect is smaller at lower (210 K) than at higher (250 K) temperature. Elastic neutron scattering results are complemented by differential scanning calorimetry data that put in evidence, besides the glass transition at about 170 K, a first-order-like endothermic transition occurring at about 230 K that, in view of the neutron scattering results, can be attributed to a liquid-liquid crossover. Our results give experimental evidence for the presence, in deeply cooled confined water, of a crossover occurring at about 230 K (at ambient pressure) from a liquid phase predominant at 210 K to another liquid phase predominant at 250 K; therefore, they are fully consistent with the liquid-liquid transition hypothesis.


Subject(s)
Hydrogen/chemistry , Models, Chemical , Water/chemistry , Calorimetry, Differential Scanning , Cold Temperature , Hydrophobic and Hydrophilic Interactions , Neutron Diffraction/methods , Phase Transition , Silicon Dioxide/chemistry , Water Movements
4.
J Chem Phys ; 141(18): 18C510, 2014 Nov 14.
Article in English | MEDLINE | ID: mdl-25399175

ABSTRACT

The Boson peak of deeply cooled water confined in the pores of a silica xerogel is studied by inelastic neutron scattering at different hydration levels to separate the contributions from matrix, water on the pore surfaces and "internal" water. Our results reveal that at high hydration level, where the contribution from internal water is dominant, the temperature dependence of the Boson peak intensity shows an inflection point at about 225 K. The complementary use of differential scanning calorimetry to describe the thermodynamics of the system allows identifying the inflection point as the signature of a water liquid-liquid crossover.


Subject(s)
Cold Temperature , Water/chemistry , Calorimetry, Differential Scanning , Gels , Porosity , Silicon Dioxide/chemistry , Thermodynamics
5.
Biophys Chem ; 185: 25-31, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24309207

ABSTRACT

In this work we present a thorough investigation of the hydration dependence of myoglobin dynamics. The study is performed on D2O-hydrated protein powders in the hydration range 0

Subject(s)
Molecular Dynamics Simulation , Myoglobin/chemistry , Water/chemistry , Animals , Calorimetry, Differential Scanning , Dielectric Spectroscopy , Horses , Neutron Diffraction , Phase Transition
6.
J Chem Phys ; 139(12): 121102, 2013 Sep 28.
Article in English | MEDLINE | ID: mdl-24089711

ABSTRACT

In this work, we compare experimental data on myoglobin hydrated powders from elastic neutron scattering, broadband dielectric spectroscopy, and differential scanning calorimetry. Our aim is to obtain new insights on the connection between the protein dynamical transition, a fundamental phenomenon observed in proteins whose physical origin is highly debated, and the liquid-liquid phase transition (LLPT) possibly occurring in protein hydration water and related to the existence of a low temperature critical point in supercooled water. Our results provide a consistent thermodynamic/dynamic description which gives experimental support to the LLPT hypothesis and further reveals how fundamental properties of water and proteins are tightly related.


Subject(s)
Myoglobin/chemistry , Thermodynamics , Water/chemistry , Phase Transition
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