ABSTRACT
Abstract The Bare-faced Curassow Crax fasciolata (Cracidae:Cracinae) is a vulnerable species that was classified as critically endangered by the São Paulo State -Brazil, in 2008. Specialists recommended "searches for areas where there may be a few remaining populations and protection of the last remaining semideciduous forest in the State". Protected areas were investigated in the Cerrado and semideciduous forest in São Paulo State by camera trapping to evaluate the presence of the Bare-faced Curassow. Eight protected areas in Cerrado biome were investigated, but the Bare-faced Curassows was recorded only at Furnas do Bom Jesus State Park (2,069 ha), São Paulo State despite the large sampling effort in larger protected areas such as the Santa Bárbara Ecological Station (2,712 ha) and Jataí Ecological Station (9,074 ha); the largest protected area of Cerrado biome in São Paulo State. This record of C. fasciolata is important for the Conservation Action Plan for the Cracid family and shows the importance of monitoring biodiversity and conserving even relatively small remnants of native vegetation for the conservation of this species.
Resumo O mutum-de-penacho Crax fasciolata (Cracidae:Cracinae) é uma espécie ameaçada de extinção e foi considerada criticamente em perigo em 2008 no estado de São Paulo. As recomendações dos especialistas para a conservação da espécie no estado foram "a pesquisa por áreas onde poderia existir populações remanescentes e a proteção de remanescentes de floresta semidecidual". Neste trabalho, oito Unidades de Conservação foram investigadas em áreas com vegetação de Cerrado e de floresta semidecidual por meio de armadilhas fotográficas digitais para verificar a presença do mutum-de-penacho (Crax fasciolata). Entretanto, o mutum-de-penacho foi registrado apenas no Parque Estadual Furnas do Bom Jesus, que possui 2.069 ha, apesar do maior esforço amostral em áreas maiores, como a Estação Ecológica de Santa Bárbara (2.712 ha) e Estação Ecológica de Jataí (9.074),- a maior Unidade de Conservação do bioma Cerrado no estado de São Paulo. O registro do mutum-de-penacho no Parque Estadual Furnas do Bom Jesus é muito importante para o Plano de Ação e Conservação da família Cracidae e mostra a importância do monitoramento da biodiversidade e a conservação de remanescentes de vegetação nativa, mesmo pequenos, para a conservação dessa espécie.
ABSTRACT
BACKGROUND: The recently constructed river buffalo whole-genome radiation hybrid panel (BBURH5000) has already been used to generate preliminary radiation hybrid (RH) maps for several chromosomes, and buffalo-bovine comparative chromosome maps have been constructed. Here, we present the first-generation whole genome RH map (WG-RH) of the river buffalo generated from cattle-derived markers. The RH maps aligned to bovine genome sequence assembly Btau_4.0, providing valuable comparative mapping information for both species. RESULTS: A total of 3990 markers were typed on the BBURH5000 panel, of which 3072 were cattle derived SNPs. The remaining 918 were classified as cattle sequence tagged site (STS), including coding genes, ESTs, and microsatellites. Average retention frequency per chromosome was 27.3% calculated with 3093 scorable markers distributed in 43 linkage groups covering all autosomes (24) and the X chromosomes at a LOD >or= 8. The estimated total length of the WG-RH map is 36,933 cR5000. Fewer than 15% of the markers (472) could not be placed within any linkage group at a LOD score >or= 8. Linkage group order for each chromosome was determined by incorporation of markers previously assigned by FISH and by alignment with the bovine genome sequence assembly (Btau_4.0). CONCLUSION: We obtained radiation hybrid chromosome maps for the entire river buffalo genome based on cattle-derived markers. The alignments of our RH maps to the current bovine genome sequence assembly (Btau_4.0) indicate regions of possible rearrangements between the chromosomes of both species. The river buffalo represents an important agricultural species whose genetic improvement has lagged behind other species due to limited prior genomic characterization. We present the first-generation RH map which provides a more extensive resource for positional candidate cloning of genes associated with complex traits and also for large-scale physical mapping of the river buffalo genome.
