ABSTRACT
In this work, a careful analysis of anharmonic couplings in NH and some CH stretch modes of imidazole is carried out. This includes IR and Raman spectra of the isolated molecule and aggregates up to the trimer, together with two different theoretical approaches to the calculation of anharmonic shifts and absolute band positions. The imidazole dimer is vibrationally characterized for the first time in vacuum isolation under supersonic jet conditions, showing substantial shifts from previous helium droplet experiments and evidence for Fermi resonance for the hydrogen-bonded NH stretch. The most stable imidazole trimer structure is unambiguously shown to be cyclic with three non-equivalent, highly strained hydrogen bonds. This contrasts the helium droplet observation of a chain trimer involving two unstrained hydrogen bonds. These experimental conclusions are strongly corroborated by theory, including vibrational perturbation theory and anharmonic normal mode analysis. Systematic error compensation in some of these methods is emphasized. Intramolecular anharmonic coupling constants from perturbation theory are validated by Raman hot band jet spectroscopy of the monomer. Imidazole aggregation is shown to provide valuable benchmarking opportunities for electronic structure and in particular for anharmonic vibrational methods, covering the field of strong and strongly distorted hydrogen bonding.
ABSTRACT
The dimer of trans-N-methylacetamide serves as a simple model for hydrogen bonds in peptides, free of any backbone distortions. Its preferred structures represent benchmark systems for an accurate quantum chemical description of protein interactions. The trimer allows for either two linear or three strained hydrogen bonds, with the former being the only structural motif considered so far in the literature, but the latter winning in energy by a large margin due to London dispersion. A combination of linear Raman and infrared supersonic jet techniques with B3LYP-D3/aug-cc-pVTZ quantum chemical predictions corrects earlier tentative spectroscopic assignments based on a hybrid density functional without dispersion correction. Linear Amide I-III infrared spectra of the jet-cooled monomer are compared to those recently obtained by action spectroscopy.
