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1.
Sci Rep ; 11(1): 1290, 2021 01 14.
Article in English | MEDLINE | ID: mdl-33446678

ABSTRACT

We have discovered a new 4 h ultradian rhythm that occurs during the interphase of the cell cycle in a wide range of individual mammalian cells, including both primary and transformed cells. The rhythm was detected by holographic lens-free microscopy that follows the histories of the dry mass of thousands of single live cells simultaneously, each at a resolution of five minutes. It was vital that the rhythm was observed in inherently heterogeneous cell populations, thus eliminating synchronization and labeling bias. The rhythm is independent of circadian rhythm, and is temperature-compensated. We show that the amplitude of the fundamental frequency provides a way to quantify the effects of, chemical reagents on cells, thus shedding light on its mechanism. The rhythm is suppressed by proteostasis disruptors and is detected only in proliferating cells, suggesting that it represents a massive degradation and re-synthesis of protein every 4 h in growing cells.


Subject(s)
Ultradian Rhythm , Cell Proliferation , HeLa Cells , Holography , Humans , Interphase , Single-Cell Analysis , Temperature
2.
J Phys Condens Matter ; 33(8): 085602, 2021 Feb 24.
Article in English | MEDLINE | ID: mdl-33137797

ABSTRACT

We consider itinerant spinless electrons moving as defects in a dilute two-dimensional Ising spin system, leading to an effective interaction mediated by spin fluctuations. Coupled self-consistent equations are analyzed after expressing the spin and fermion operators in terms of Grassmann variables. The effective mass, density of states, and specific heat are evaluated. We found that at low temperature and low electron density the effective mass is reduced, whereas in the critical region it sharply diverges. At higher temperature, the fermions behave like a Fermi liquid with a small enhanced mass.

3.
Phys Rev E ; 100(5-1): 052108, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31869882

ABSTRACT

We consider a stochastic dynamics for a system of diffusing hard-core particles on a periodic chain with asymmetric diffusion rules. A given cluster of particles can diffuse to the right as a whole but the particle located on the left boundary of the cluster is allowed to break off from it and diffuse to the left. Clusters of particles can eventually merge with other clusters. These rules allow for the creation of clusters of different sizes. We discuss the size distribution of the clusters in the long time or steady state limit, as a function of the particle concentration c. We consider the general time dependent master equation based on Smoluchowski's theory for local cluster merging or fragmentation and diffusion processes, and study the solutions using the generating function in the large size limit. We found that there exists a critical density c^{*}=sqrt[2]-1 for which the cluster distribution decays like a power law with exponent 5/2.

4.
J Phys Condens Matter ; 28(27): 275702, 2016 07 13.
Article in English | MEDLINE | ID: mdl-27214663

ABSTRACT

de Haas-van Alphen oscillations of the organic metal κ-(ET)2Cu(SCN)2 have been measured up to 55 T at liquid helium temperatures. The Fermi surface of this charge transfer salt is a textbook example of a linear chain of orbits coupled by magnetic breakdown. Accordingly, the oscillation spectrum is composed of linear combinations of the frequencies linked to the α and magnetic breakdown-induced ß orbits. The field and temperature dependence of all the observed Fourier components, in particular the 'forbidden frequency' [Formula: see text] which cannot correspond to a classical orbit, are quantitatively accounted for by analytical calculations based on a second order development of the free energy, i.e. beyond the first order Lifshitz-Kosevich formula.

5.
J Phys Condens Matter ; 27(31): 315601, 2015 Aug 12.
Article in English | MEDLINE | ID: mdl-26189459

ABSTRACT

According to band structure calculations, the Fermi surface of the quasi-two dimensional metal θ-(ET)4ZnBr4(C6H4Cl2) illustrates the linear chain of coupled orbits model. Accordingly, de Haas-van Alphen oscillations spectra recorded in pulsed magnetic field of up to 55 T evidence many Fourier components, the frequency of which are linear combinations of the frequencies relevant to the closed α and the magnetic breakdown ß orbits. The field and temperature dependence of their amplitude are quantitatively accounted for by analytic calculations including, beyond the Lifshitz-Kosevich formula, second-order terms in damping factors due to the oscillation of the chemical potential as the magnetic field varies. Whereas these second-order terms are negligible for the orbits α, ß and 2ß-α, they are solely responsible for the 'forbidden orbit' ß-α and its harmonic and have a significant influence on Fourier components such as 2α and ß+α, yielding strongly non-Lifshitz-Kosevich behaviour in the latter case.

6.
Article in English | MEDLINE | ID: mdl-25019725

ABSTRACT

We present an application of the Grassmann algebra to the problem of the monomer-dimer statistics on a two-dimensional square lattice. The exact partition function, or total number of possible configurations, of a system of dimers with a finite set of n monomers at fixed positions can be expressed via a quadratic fermionic theory. We give an answer in terms of a product of two pfaffians and the solution is closely related to the Kasteleyn result of the pure dimer problem. Correlation functions are in agreement with previous results, both for monomers on the boundary, where a simple exact expression is available in the discrete and continuous case, and in the bulk where the expression is evaluated numerically.


Subject(s)
Models, Chemical , Models, Statistical , Dimerization , Solutions
7.
PLoS One ; 9(3): e89980, 2014.
Article in English | MEDLINE | ID: mdl-24599221

ABSTRACT

Social systems have recently attracted much attention, with attempts to understand social behavior with the aid of statistical mechanics applied to complex systems. Collective properties of such systems emerge from couplings between components, for example, individual persons, transportation nodes such as airports or subway stations, and administrative districts. Among various collective properties, criticality is known as a characteristic property of a complex system, which helps the systems to respond flexibly to external perturbations. This work considers the criticality of the urban transportation system entailed in the massive smart card data on the Seoul transportation network. Analyzing the passenger flow on the Seoul bus system during one week, we find explicit power-law correlations in the system, that is, power-law behavior of the strength correlation function of bus stops and verify scale invariance of the strength fluctuations. Such criticality is probed by means of the scaling and renormalization analysis of the modified gravity model applied to the system. Here a group of nearby (bare) bus stops are transformed into a (renormalized) "block stop" and the scaling relations of the network density turn out to be closely related to the fractal dimensions of the system, revealing the underlying structure. Specifically, the resulting renormalized values of the gravity exponent and of the Hill coefficient give a good description of the Seoul bus system: The former measures the characteristic dimensionality of the network whereas the latter reflects the coupling between distinct transportation modes. It is thus demonstrated that such ideas of physics as scaling and renormalization can be applied successfully to social phenomena exemplified by the passenger flow.


Subject(s)
Transportation/statistics & numerical data , City Planning , Data Interpretation, Statistical , Humans , Models, Statistical , Motor Vehicles , Republic of Korea
8.
J Phys Condens Matter ; 25(29): 296004, 2013 Jul 24.
Article in English | MEDLINE | ID: mdl-23807800

ABSTRACT

We present a method to analyze the magnetic properties of frustrated Ising spin models on specific hierarchical lattices with random dilution. Disorder is induced by dilution and geometrical frustration rather than randomness in the internal couplings of the original Hamiltonian. The two-dimensional model presented here possesses a macroscopic entropy at zero temperature in the large size limit, very close to the Pauling estimate for spin-ice on the pyrochlore lattice, and a crossover towards a paramagnetic phase. The disorder due to dilution is taken into account by considering a replicated version of the recursion equations between partition functions at different lattice sizes. An analysis to first order in replica number allows a systematic reorganization of the disorder configurations, leading to a recurrence scheme. This method is numerically implemented to evaluate thermodynamical quantities such as specific heat and susceptibility in an external field.


Subject(s)
Computer Simulation , Magnets/chemistry , Models, Statistical , Quantum Theory , Entropy , Models, Chemical , Temperature , Thermodynamics
9.
Phys Rev E Stat Nonlin Soft Matter Phys ; 83(3 Pt 1): 031123, 2011 Mar.
Article in English | MEDLINE | ID: mdl-21517470

ABSTRACT

The Weibull function is widely used to describe skew distributions observed in nature. However, the origin of this ubiquity is not always obvious to explain. In the present paper, we consider the well-known Galton-Watson branching process describing simple replicative systems. The shape of the resulting distribution, about which little has been known, is found essentially indistinguishable from the Weibull form in a wide range of the branching parameter; this can be seen from the exact series expansion for the cumulative distribution, which takes a universal form. We also find that the branching process can be mapped into a process of aggregation of clusters. In the branching and aggregation process, the number of events considered for branching and aggregation grows cumulatively in time, whereas, for the binomial distribution, an independent event occurs at each time with a given success probability.


Subject(s)
Physics/methods , Animals , Biophysics/methods , Cell Division , Models, Biological , Models, Statistical , Models, Theoretical , Monte Carlo Method , Normal Distribution , Probability , Statistical Distributions
10.
Phys Rev E Stat Nonlin Soft Matter Phys ; 70(4 Pt 2): 046112, 2004 Oct.
Article in English | MEDLINE | ID: mdl-15600465

ABSTRACT

Order parameter fluctuations for the two-dimensional Ising model in the region of the critical temperature are presented. A locus of temperatures T(*) (L) and a locus of magnetic fields B(*) (L) are identified, for which the probability density function is similar to that for the two-dimensional XY model in the spin wave approximation. The characteristics of the fluctuations along these points are largely independent of universality class. We show that the largest range of fluctuations relative to the variance of the distribution occurs along these loci of points, rather than at the critical temperature itself and we discuss this observation in terms of intermittency. Our motivation is the identification of a generic form for fluctuations in correlated systems in accordance with recent experimental and numerical observations. We conclude that a universality-class-dependent form for the fluctuations is a particularity of critical phenomena related to the change in symmetry at a phase transition.

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