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1.
Phytochemistry ; 135: 24-33, 2017 Mar.
Article in English | MEDLINE | ID: mdl-27964835

ABSTRACT

Water deficiency has become a major issue for modern agriculture as its effects on crop yields and tuber quality have become more pronounced. Potato genotypes more tolerant to water shortages have been identified through assessment of yield and dry matter. In the present study, a combination of metabolite profiling and physiological/agronomical measurements has been used to explore complex system level responses to non-lethal water restriction. The metabolites identified were associated with physiological responses in three different plant tissues (leaf, root and tuber) of five different potato genotypes varying in susceptibility/tolerance to drought. This approach explored the potential of metabolite profiling as a tool to unravel sectors of metabolism that react to stress conditions and could mirror the changes in the plant physiology. The metabolite results showed different responses of the three plant tissues to the water deficit, resulting either in different levels of the metabolites detected or different metabolites expressed. The leaf material displayed the most changes to drought as reported in literature. The results highlighted genotype-specific signatures to water restriction over all three plant tissues suggesting that the genetics can predominate over the environmental conditions. This will have important implications for future breeding approaches.


Subject(s)
Solanum tuberosum/chemistry , Stress, Physiological , Water/metabolism , Dehydration , Droughts , Gene Expression Regulation, Plant , Plant Leaves/metabolism , Plant Proteins/metabolism , Plant Roots/metabolism , Plant Tubers/metabolism , Plants, Genetically Modified/metabolism , Solanum tuberosum/genetics
2.
J Appl Microbiol ; 113(4): 888-95, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22738026

ABSTRACT

AIMS: Pigmented Bacillus spp. with probiotic properties have been isolated. In the yellow-/orange-coloured strains, the carotenoid pigments present have been characterized. In contrast, the carotenoids present in the Bacillus isolates coloured red await identification. The present article reports progress on the elucidation of the pigment biosynthetic pathway in these red-pigmented Bacillus firmus strains. METHODS AND RESULTS: A combination of UV/Vis, chromatographic and mass spectrometry (MS) has revealed the properties of the predominant pigment and the end-point carotenoid of the pathway to be methyl 4,4'-diapolycopene-dioate after transmethylation. The diglycosyl ester of 4,4'-diapolycopene-dioate persists in vivo prior to chemical treatment. Different mutants and inhibitor treatment were employed to establish the C30 biosynthesis pathway with all precursors and intermediates to 4,4'-diapolycopene-dioate detected, which include 4,4'-diapophytene and all desaturation intermediates to 4,4'-diapolycopene and 4,4'-diapolycopene-dialdehyde. To cultures synthesizing the 4,4'-diapolycopene-dioate derivative and those in which its formation was inhibited, oxidative stress was induced by peroxide treatment. Conditions that decreased the growth rate of the pigmented cells by only 30% caused a complete growth inhibition of the culture devoid of the 4,4'-diapolycopene-dioate derivative. CONCLUSION: This finding demonstrates the diversity of C30 carotenoid biosynthesis in Bacillus species and the antioxidative function of the 4,4'-diapolycopene-dioate derivative in B. firmus cells. SIGNIFICANCE AND IMPACT OF THE STUDY: It could be shown that the C30 4,4'-diapolycopene-dioate derivatives protect pigmented B. firmus from peroxidative reactions. Under oxidative conditions, this can be an ecological advantage over nonpigmented (=noncarotenogenic) strains that are equally abundant.


Subject(s)
Bacillus/metabolism , Biosynthetic Pathways , Carotenoids/biosynthesis , Chromatography, High Pressure Liquid , Mass Spectrometry , Oxidative Stress
3.
Meat Sci ; 89(2): 233-7, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21555191

ABSTRACT

Mechanically recovered meat is cheaper than raw meat and thus has been incorporated into many meat-derived products. EU regulations exclude mechanically recovered meat from the definition of meat; as a consequence analytical procedures are needed to differentiate it from hand-deboned meat. The present pilot study has utilized a proteomic approach to find potential markers for the detection of chicken mechanically recovered meat. Intact proteins were extracted from raw meat and then analyzed with OFF-GEL electrophoresis followed by SDS-PAGE and identification of potential markers by nano-LC-MS/MS. It was shown that it is possible to extract, separate and identify key proteins from processed meat material. Potential chicken mechanically recovered meat markers--hemoglobin subunits and those similar to myosin-binding protein C were also identified.


Subject(s)
Food Handling/methods , Meat/analysis , Proteomics/methods , Animals , Biomarkers/analysis , Biomarkers/chemistry , Carrier Proteins/isolation & purification , Chickens , Chromatography, Liquid , Electrophoresis, Polyacrylamide Gel , Food Analysis/methods , Hemoglobin Subunits/isolation & purification , Mass Spectrometry , Pilot Projects
4.
J Appl Microbiol ; 108(6): 1889-902, 2010 Jun.
Article in English | MEDLINE | ID: mdl-19878522

ABSTRACT

AIMS: To identify the diversity of pigmented aerobic spore formers found in the environment and to characterize the chemical nature of this pigmentation. MATERIALS AND RESULTS: Sampling of heat-resistant bacterial counts from soil, sea water and the human gastrointestinal tract. Phylogenetic profiling using analysis of 16S rRNA sequences to define species. Pigment profiling using high-performance liquid chromatography-photo diode array analysis. CONCLUSIONS: The most commonly found pigments were yellow, orange and pink. Isolates were nearly always members of the Bacillus genus and in most cases were related with known species such as Bacillus marisflavi, Bacillus indicus, Bacillus firmus, Bacillus altitudinis and Bacillus safensis. Three types of carotenoids were found with absorption maxima at 455, 467 and 492 nm, corresponding to the visible colours yellow, orange and pink, respectively. Although the presence of other carotenoids cannot be ruled out, these three predominant carotenoids appear to account for the pigments obtained in most pigmented bacilli, and our analysis reveals the existence of a C30 biosynthetic pathway. Interestingly, we report the presence of a water-soluble pigment that may also be a carotenoid. The function of carotenoids is photoprotection, and carotenoid-containing spores exhibited significantly higher levels of resistance to UV radiation than non-carotenoid-containing Bacillus species. SIGNIFICANCE AND IMPACT OF THE STUDY: This study demonstrates that pigmented bacilli are ubiquitous and contain new carotenoid biosynthetic pathways that may have industrial importance.


Subject(s)
Bacillus/chemistry , Carotenoids/chemistry , Bacillus/classification , Bacillus/genetics , Bacillus/isolation & purification , Gastrointestinal Tract/microbiology , Humans , Phylogeny , Pigmentation , RNA, Ribosomal, 16S/genetics , Seawater/microbiology , Soil Microbiology , Spores, Bacterial/chemistry , Spores, Bacterial/classification , Spores, Bacterial/genetics , Spores, Bacterial/isolation & purification , Water Microbiology
5.
Planta ; 217(6): 896-903, 2003 Oct.
Article in English | MEDLINE | ID: mdl-12844264

ABSTRACT

A characteristic trait of the high pigment-1 ( hp-1) mutant phenotype of tomato ( Lycopersicon esculentum Mill.) is increased pigmentation resulting in darker green leaves and a deeper red fruit. In order to determine the basis for changes in pigmentation in this mutant, cellular and plastid development was analysed during leaf and fruit development, as well as the expression of carotenogenic genes and phytoene synthase enzyme activity. The hp-1 mutation dramatically increases the periclinal elongation of leaf palisade mesophyll cells, which results in increased leaf thickness. In addition, in both palisade and spongy mesophyll cells, the total plan area of chloroplasts per cell is increased compared to the wild type. These two perturbations in leaf development are the primary cause of the darker green hp-1 leaf. In the hp-1 tomato fruit, the total chromoplast area per cell in the pericarp cells of the ripe fruit is also increased. In addition, although expression of phytoene synthase and desaturase is not changed in hp-1 compared to the wild type, the activity of phytoene synthase in ripe fruit is 1.9-fold higher, indicating translational or post-translational control of carotenoid gene expression. The increased plastid compartment size in leaf and fruit cells of hp-1 is novel and provides evidence that the normally tightly controlled relationship between cell expansion and the replication and expansion of plastids can be perturbed and thus could be targeted by genetic manipulation.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Plastids/ultrastructure , Solanum lycopersicum/growth & development , Solanum lycopersicum/genetics , Alkyl and Aryl Transferases/genetics , Base Sequence , Carotenoids/metabolism , Chlorophyll/metabolism , DNA Primers , Geranylgeranyl-Diphosphate Geranylgeranyltransferase , Solanum lycopersicum/ultrastructure , Oxidoreductases/genetics , Oxidoreductases/metabolism , Phenotype , Plant Leaves/enzymology , Polymerase Chain Reaction , Seeds/physiology
6.
Phytochemistry ; 58(1): 75-9, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11524116

ABSTRACT

The characteristic pigmentation of ripe tomato fruit is due to the deposition of carotenoid pigments. In tomato, numerous colour mutants exist. The Cnr tomato mutant has a colourless, non-ripening phenotype. In this work, carotenoid formation in the Cnr mutant has been studied at the biochemical level. The carotenoid composition of Ailsa Craig (AC) and Cnr leaves was qualitatively and quantitatively similar. However, Cnr fruits had low levels of total carotenoids and lacked detectable levels of phytoene and lycopene. The presence of normal tocopherols and ubiquinone-9 levels in the ripe Cnr fruits suggested that other biosynthetically related isoprenoids were unaffected by the alterations to carotenoid biosynthesis. In vitro assays confirmed the virtual absence of phytoene synthesis in the ripe Cnr fruit. Extracts from ripe fruit of the Cnr mutant also revealed a reduced ability to synthesise the carotenoid precursor geranylgeranyl diphosphate (GGPP). These results suggest that besides affecting the first committed step in carotenoid biosynthesis (phytoene synthase) the Cnr mutation also affects the formation of the isoprenoid precursor (GGPP).


Subject(s)
Carotenoids/biosynthesis , Mutation , Pigments, Biological , Solanum lycopersicum/genetics , Carotenoids/genetics , Carotenoids/metabolism , Color , Lycopene , Pigments, Biological/metabolism , Plant Leaves/physiology , Polyisoprenyl Phosphates/metabolism , Tocopherols/metabolism , Ubiquinone/metabolism
7.
Biochem Biophys Res Commun ; 281(2): 576-81, 2001 Feb 23.
Article in English | MEDLINE | ID: mdl-11181086

ABSTRACT

There is considerable interest in the bioavailability of carotenoids from the diet and their bioactivity in vivo. Little is known, however, of the preabsorption events in the gastric lumen on the breakdown or isomerisation of dietary carotenoids. In this study the effects of the acidic environment found in the gastric milieu on lycopene have been investigated. The results show that under these conditions all-trans-lycopene is isomerised to cis-isomers, which may be implicated in enhanced absorption from the small intestine. Furthermore the pH, as well as the food matrix, seems to have an influence on the level of isomerisation of this carotenoid.


Subject(s)
Carotenoids/chemistry , Gastric Juice/chemistry , Beverages , Chromatography, High Pressure Liquid , Gastric Acid/chemistry , Humans , Hydrogen-Ion Concentration , Solanum lycopersicum/chemistry , Stereoisomerism
8.
Plant J ; 24(4): 551-8, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11115136

ABSTRACT

The application of high-performance liquid chromatography (HPLC) using a C30 reverse-phase stationary matrix has enabled the simultaneous separation of carotenes, xanthophylls, ubiquinones, tocopherols and plastoquinones in a single chromatogram. Continuous photodiode array (PDA) detection ensured identification and quantification of compounds upon elution. Applications of the method to the characterization of transgenic and mutant tomato varieties with altered isoprenoid content, biochemical screening of Arabidopsis thaliana, and elucidation of the modes of action of bleaching herbicides are described to illustrate the versatility of the procedure.


Subject(s)
Chromatography, High Pressure Liquid/methods , Plants/chemistry , Terpenes/analysis , Arabidopsis/chemistry , Arabidopsis/drug effects , Arabidopsis/genetics , Cyclohexanones/pharmacology , Herbicides/pharmacology , Solanum lycopersicum/chemistry , Solanum lycopersicum/drug effects , Solanum lycopersicum/genetics , Mesylates/pharmacology , Mutation , Plants/metabolism , Plants, Genetically Modified , Terpenes/metabolism
9.
Planta ; 211(3): 361-9, 2000 Aug.
Article in English | MEDLINE | ID: mdl-10987554

ABSTRACT

Phytoene synthase activity in tomato chloroplasts is membrane-associated, requiring treatment with high ionic strength buffer or mild non-ionic detergent for solubilisation. Using a combination of ammonium sulphate precipitation, cation and anion exchange, dye-ligand and hydrophobic interaction chromatography, phytoene synthase has been purified 600-fold from tomato (Lycopersion esculentum Mill.) chloroplasts. The native molecular mass of the enzyme was 43 kDa. with an isoelectric point of 4.6. Although phytoene synthase was functional in a monomeric state, under optimal native conditions it was associated with a large (at least 200 kDa) protein complex which contained other terpenoid enzymes such as isopentenyl diphosphate isomerase and geranylgeranyl diphosphate (GGPP) synthase. Both Mn2+ and ATP, in combination, were essential for catalytic activity; their effect was stochiometric from 0.5 to 2 mM, with Km values for Mn2+, ATP and the substrate GGPP of 0.4 mM, 2.0 mM and 5 microM, respectively. The detergents Tween 60 and Triton X-100 (0.1 w/v) stimulated (5-fold) enzyme activity, but lipids (crude chloroplast lipids and phospholipids) had no such effect and could not compensate for the absence of detergent. A number of metabolites with possible regulatory effects were investigated, including beta-carotene, which reduced enzyme activity in vitro some 2-fold. A comparison of phytoene synthase activity from partially purified chloroplast and chromoplast preparations indicated biochemical differences.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Chloroplasts/enzymology , Solanum lycopersicum/enzymology , Adenosine Triphosphate/metabolism , Alkyl and Aryl Transferases/chemistry , Alkyl and Aryl Transferases/isolation & purification , Cations, Divalent/metabolism , Chromatography, DEAE-Cellulose , Electrophoresis, Polyacrylamide Gel , Geranylgeranyl-Diphosphate Geranylgeranyltransferase , Kinetics , Macromolecular Substances , Magnesium/metabolism , Molecular Weight , Multienzyme Complexes/chemistry , Multienzyme Complexes/isolation & purification , Multienzyme Complexes/metabolism , Substrate Specificity
10.
Nat Biotechnol ; 18(6): 666-9, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10835607

ABSTRACT

Tomato products are the principal dietary sources of lycopene and major source of beta-carotene, both of which have been shown to benefit human health. To enhance the carotenoid content and profile of tomato fruit, we have produced transgenic lines containing a bacterial carotenoid gene (crtI) encoding the enzyme phytoene desaturase, which converts phytoene into lycopene. Expression of this gene in transgenic tomatoes did not elevate total carotenoid levels. However, the beta-carotene content increased about threefold, up to 45% of the total carotenoid content. Endogenous carotenoid genes were concurrently upregulated, except for phytoene synthase, which was repressed. The alteration in carotenoid content of these plants did not affect growth and development. Levels of noncarotenoid isoprenoids were unchanged in the transformants. The phenotype has been found to be stable and reproducible over at least four generations.


Subject(s)
Plants, Genetically Modified/metabolism , Solanum lycopersicum/genetics , Vitamin A/chemistry , beta Carotene/biosynthesis , Blotting, Northern , Blotting, Western , Cell Division/genetics , Electrophoresis, Polyacrylamide Gel , Gene Silencing , Solanum lycopersicum/enzymology , Oxidoreductases/genetics , Phenotype , Plant Leaves/enzymology , Plants, Genetically Modified/enzymology , Tissue Distribution , Up-Regulation
11.
Plant Mol Biol ; 40(4): 687-98, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10480392

ABSTRACT

The characteristic yellow fruit phenotype of the r,r mutant and Psy-1 (phytoene synthase-1) antisense tomatoes is due to a mutated or down-regulated phytoene synthase protein, respectively, resulting in the virtual absence of carotenoids. Based on detailed carotenoid determinations Psy-1 appeared to barely contribute to the formation of carotenoids in chloroplast-containing tissues. Despite the virtual absence of carotenoids in ripe fruit the formation of phytoene in vitro was detected in fruit of both mutants. When [14C]isopentenyl pyrophosphate (IPP) was used as the substrate for phytoene synthase a reduction (e.g. r,r mutant, 5-fold) in the formation of phytoene was observed with an accumulation (e.g. r,r mutant, 2-fold) of the immediate precursor geranylgeranyl pyrophosphate (GGPP). Contrastingly, reduced phytoene synthase activity was not detected when [3H]GGPP was used as the substrate. The profile of phytoene formation during ripening was also different in the down-regulated mutants compared to the wild-type. Using specific primers, RT-PCR analysis detected the presence of Psy-2 transcripts in the down-regulated mutants and wild-type throughout fruit development and ripening. These data were supported by the detection of phytoene synthase protein on western blots. Both GGPP formation and phytoene desaturation were elevated in these mutants. Therefore, it appears that despite the absence of carotenoids in ripe fruit, both the mutants have the enzymic capability to synthesize carotenoids in this tissue. Implications of the data with respect to the regulation of carotenoid formation and the channelling of prenyl lipid precursors in tomato (and its potential manipulation) are discussed.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Carotenoids/biosynthesis , Solanum lycopersicum/enzymology , Alkyl and Aryl Transferases/genetics , Blotting, Western , Carotenoids/metabolism , Chlorophyll/metabolism , Gene Expression Regulation, Developmental , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Geranylgeranyl-Diphosphate Geranylgeranyltransferase , Isoenzymes/genetics , Isoenzymes/metabolism , Solanum lycopersicum/genetics , Solanum lycopersicum/growth & development , Mutation , RNA, Plant/genetics , RNA, Plant/metabolism
12.
Phytochemistry ; 49(4): 971-8, 1998 Oct.
Article in English | MEDLINE | ID: mdl-9788145

ABSTRACT

Monoclonal antibodies have been prepared against the tomato (Lycopersicon esculentum Mill.) fruit ripening-enhanced phytoene synthase (PSY1). The antigen was prepared as a beta-galactosidase fusion protein by cloning a 1.13 kb fragment of Psy1 cDNA into pUR291, followed by transformation of E. coli. The fusion protein, induced by IPTG, was purified by preparative SDS-PAGE and used to elicit an immune response. The cell lines were screened for cross-reactivity against beta-galactosidase-phytoene synthase fusion protein in E. coli extracts using western blotting and ELISA detection procedures. Positive clones were further screened for their ability to cross-react with the mature phytoene synthase protein on western blots as well as their ability to inhibit enzyme activity. Eleven monoclonal lines were obtained. Nine of these, all of the IgM isotype, exhibited strong responses to phytoene synthase of ripe tomato fruit on western blots, but did not inhibit enzyme activity effectively. The other two lines (IgG/la 2 isotypes) inhibited phytoene synthase activity in ripe tomato stroma, but produced a poor response to the protein on western blots. The monoclonals identified a ripe fruit phytoene synthase of 38 kDa, exclusively located in the chromoplast. In contrast, antibodies were unable to detect microbial phytoene synthases, nor phytoene synthase of maize leaf, tomato chloroplast or mango fruit extracts, either on western blots or from inhibition of phytoene synthase activity. However, they did cross-react with a 44 kDa protein from carrot leaf stroma and with three different proteins (44, 41, and 37 kDa) in carrot root. Cross-reactivity was also found with a 37 kDa protein from pumpkin fruit stroma.


Subject(s)
Alkyl and Aryl Transferases/immunology , Antibodies, Monoclonal/biosynthesis , Antibodies, Monoclonal/immunology , Plant Proteins/immunology , Solanum lycopersicum/enzymology , Alkyl and Aryl Transferases/genetics , Alkyl and Aryl Transferases/metabolism , Cross Reactions , DNA, Complementary/genetics , DNA, Complementary/metabolism , Geranylgeranyl-Diphosphate Geranylgeranyltransferase , Plant Proteins/genetics , Plant Proteins/metabolism , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/isolation & purification , beta-Galactosidase/biosynthesis , beta-Galactosidase/genetics , beta-Galactosidase/isolation & purification
13.
Appl Environ Microbiol ; 64(7): 2676-80, 1998 Jul.
Article in English | MEDLINE | ID: mdl-9647847

ABSTRACT

The yeast Candida utilis does not possess an endogenous biochemical pathway for the synthesis of carotenoids. The central isoprenoid pathway concerned with the synthesis of prenyl lipids is present in C. utilis and active in the biosynthesis of ergosterol. In our previous study, we showed that the introduction of exogenous carotenoid genes, crtE, crtB, and crtI, responsible for the formation of lycopene from the precursor farnesyl pyrophosphate, results in the C. utilis strain that yields lycopene at 1.1 mg per g (dry weight) of cells (Y. Miura, K. Kondo, T. Saito, H. Shimada, P. D. Fraser, and N. Misawa, Appl. Environ. Microbiol. 64:1226-1229, 1998). Through metabolic engineering of the isoprenoid pathway, a sevenfold increase in the yield of lycopene has been achieved. The influential steps in the pathway that were manipulated were 3-hydroxy methylglutaryl coenzyme A (HMG-CoA) reductase, encoded by the HMG gene, and squalene synthase, encoded by the ERG9 gene. Strains overexpressing the C. utilis HMG-CoA reductase yielded lycopene at 2.1 mg/g (dry weight) of cells. Expression of the HMG-CoA catalytic domain alone gave 4.3 mg/g (dry weight) of cells; disruption of the ERG9 gene had no significant effect, but a combination of ERG9 gene disruption and the overexpression of the HMG catalytic domain yielded lycopene at 7.8 mg/g (dry weight) of cells. The findings of this study illustrate how modifications in related biochemical pathways can be utilized to enhance the production of commercially desirable compounds such as carotenoids.


Subject(s)
Candida/metabolism , Carotenoids/biosynthesis , Farnesyl-Diphosphate Farnesyltransferase/genetics , Hydroxymethylglutaryl CoA Reductases/genetics , Carotenoids/metabolism , Genetic Engineering , Lycopene
14.
Biochim Biophys Acta ; 1392(1): 51-8, 1998 May 20.
Article in English | MEDLINE | ID: mdl-9593819

ABSTRACT

The crtB gene encoding phytoene synthase from the carotenogenic enterobacterium Erwinia uredovora was overexpressed to about 20% of the total cellular protein in Escherichia coli. Formation of the active phytoene synthase had the effect of suppressing the growth of the expressing strain. Presumably inhibition of growth arose from the depletion of the substrate geranylgeranyl pyrophosphate (GGPP) which, in E. coli, is necessary for the synthesis of essential prenylpyrophosphate derivatives. In order to overcome the poor growth characteristics of the phytoene synthase expressing strain, GGPP levels were increased by co-expressing the isoprenoid biosynthetic genes crtE and idi, encoding the Erwinia GGPP synthase and Rhodobacter isopentenyl pyrophosphate isomerase, respectively. The crude enzyme preparation was partially purified 15-fold by chromatography on a DEAE column. A non-radioactive assay was developed that enabled the conversion of GGPP to phytoene. The reaction product was identified by co-chromatography with authentic standards on HPLC systems and comparison of spectral characteristics. The phytoene formed in vitro was present in both a 15-cis and all-trans isomeric configuration. The essential cofactors required were ATP in combinations with either Mn2+ or Mg2+. The Km value for GGPP was determined as 41 microM. Phytoene synthesis was inhibited by phosphate ions and squalestatin. The I50 value for the latter inhibitor was 15 microM. Lineweaver-Burk plots showed constant Km values in the presence or absence of squalestatin.


Subject(s)
Alkyl and Aryl Transferases/biosynthesis , Bacterial Proteins/biosynthesis , Erwinia/enzymology , Recombinant Proteins/biosynthesis , Alkyl and Aryl Transferases/genetics , Amino Acid Sequence , Carbon-Carbon Double Bond Isomerases/biosynthesis , Carbon-Carbon Double Bond Isomerases/genetics , Carotenoids/biosynthesis , Erwinia/genetics , Escherichia coli/genetics , Farnesyltranstransferase , Genes, Bacterial , Geranylgeranyl-Diphosphate Geranylgeranyltransferase , Hemiterpenes , Molecular Sequence Data , Rhodobacter/enzymology
15.
Eur J Biochem ; 252(2): 229-36, 1998 Mar 01.
Article in English | MEDLINE | ID: mdl-9523693

ABSTRACT

An in vitro assay procedure for the carotenoid (beta-ionone ring) 3,3'-hydroxylase and 4,4'-oxygenase has been developed that enables efficient conversion of non-radiolabeled carotenoid substrates added directly into aqueous solution. The following enzymic conversions were demonstrated and apparent kinetic constants (Vmax, Km, and specificity constants) obtained: (a) 3,3'-hydroxylase (from Agrobacterium aurantiacum and Alcaligenes sp. strain PC-1) converted phoenicoxanthin (adonirubin) to astaxanthin, 3-hydroxyechinenone to 4-ketozeaxanthin (adonixanthin), 3'-hydroxyechinenone to 4-ketozeaxanthin, as well as echinenone to 4-ketozeaxanthin via 3- and 3'-hydroxyechinenone; (b) 4,4'-Oxygenase (from A. aurantiacum, Alcaligenes sp. strain PC-1 and Haematococcus pluvialis) converted 4-ketozeaxanthin to astaxanthin, 3-hydroxyechinenone to phoenicoxanthin, 3'-hydroxyechinenone to phoenicoxanthin, and echinenone to canthaxanthin. Determination of substrate specifities allowed assessment of biosynthetic routes to astaxanthin formation and demonstrated that pathways via mono-hydroxylated and ketolated products are enzymically feasible.


Subject(s)
Carotenoids/metabolism , beta Carotene/analogs & derivatives , Alcaligenes/enzymology , Bacteria/enzymology , Chromatography, High Pressure Liquid , Detergents/pharmacology , Kinetics , Lipids/pharmacology , Mixed Function Oxygenases/metabolism , Molecular Structure , Oxygenases/metabolism , Rhizobium/enzymology , Xanthophylls , beta Carotene/biosynthesis
16.
Appl Environ Microbiol ; 64(4): 1226-9, 1998 Apr.
Article in English | MEDLINE | ID: mdl-9546156

ABSTRACT

The food-grade yeast Candida utilis has been engineered to confer a novel biosynthetic pathway for the production of carotenoids such as lycopene, beta-carotene, and astaxanthin. The exogenous carotenoid biosynthesis genes were derived from the epiphytic bacterium Erwinia uredovora and the marine bacterium Agrobacterium aurantiacum. The carotenoid biosynthesis genes were individually modified based on the codon usage of the C. utilis glyceraldehyde 3-phosphate dehydrogenase gene and expressed in C. utilis under the control of the constitutive promotes and terminators derived from C. utilis. The resultant yeast strains accumulated lycopene, beta-carotene, and astaxanthin in the cells at 1.1, 0.4, and 0.4 mg per g (dry weight) of cells, respectively. This was considered to be a result of the carbon flow into ergosterol biosynthesis being partially redirected to the nonendogenous pathway for carotenoid production.


Subject(s)
Candida/genetics , Candida/metabolism , Carotenoids/biosynthesis , Biotechnology , Ergosterol/metabolism , Erwinia/genetics , Food Microbiology , Gene Expression , Genes, Bacterial , Lycopene , Plasmids/genetics , Rhizobium/genetics , Transformation, Genetic , Xanthophylls , beta Carotene/analogs & derivatives , beta Carotene/biosynthesis
17.
Biochem J ; 324 ( Pt 2): 421-6, 1997 Jun 01.
Article in English | MEDLINE | ID: mdl-9182699

ABSTRACT

Escherichia coli expressing the Erwinia carotenoid biosynthesis genes, crtE, crtB, crtI and crtY, form yellow-coloured colonies due to the presence of beta-carotene. This host was used as a visible marker for evaluating regulatory systems operating in isoprenoid biosynthesis of E. coli. cDNAs enhancing carotenoid levels were isolated from the yeast Phaffia rhodozyma and the green alga Haematococcus pluvialis. Nucleotide sequence analysis indicated that they coded for proteins similar to isopentenyl diphosphate (IPP) isomerase of the yeast Saccharomyces cerevisiae. Determination of enzymic activity confirmed the identity of the gene products as IPP isomerases. The corresponding gene was isolated from the genomic library of S. cerevisiae based on its nucleotide sequence, and was confirmed to have the same effect as the above two IPP isomerase genes when introduced into the E. coli transformant accumulating beta-carotene. In the three E. coli strains carrying the individual exogenous IPP isomerase genes, the increases in carotenoid levels are comparable to the increases in IPP isomerase enzyme activity with reference to control strains possessing the endogenous gene alone. These results imply that IPP isomerase forms an influential step in isoprenoid biosynthesis of the prokaryote E. coli, with potential for the efficient production of industrially useful isoprenoids by metabolic engineering.


Subject(s)
Carbon-Carbon Double Bond Isomerases , Carotenoids/biosynthesis , Chlorophyta/genetics , Escherichia coli/metabolism , Fungal Proteins/genetics , Gene Expression Regulation, Bacterial , Isomerases/genetics , Plant Proteins/genetics , Recombinant Fusion Proteins/biosynthesis , Yeasts/genetics , Amino Acid Sequence , Enzyme Induction , Erwinia/genetics , Genes, Fungal , Genes, Plant , Hemiterpenes , Isomerases/biosynthesis , Lycopene , Molecular Sequence Data , Saccharomyces cerevisiae/genetics , Sequence Alignment , Sequence Homology, Amino Acid , Species Specificity , beta Carotene/biosynthesis
18.
J Biol Chem ; 272(10): 6128-35, 1997 Mar 07.
Article in English | MEDLINE | ID: mdl-9045623

ABSTRACT

Escherichia coli strains expressing the marine bacteria (Agrobacterium aurantiacum and Alcaligenes sp. strain PC-1) astaxanthin biosynthetic genes (crtZ and W), Haematococcus pluvialis bkt, and Erwinia uredovora crtZ genes were used for in vitro characterization of the respective enzymes. Specific enzyme assays indicated that all of the enzymes are bifunctional, in that the CrtZ enzymes formed zeaxanthin from beta-carotene via beta-cryptoxanthin, as well as astaxanthin from canthaxanthin via phoenicoxanthin (adonirubin). The BKT/CrtW enzymes synthesized canthaxanthin via echinenone from beta-carotene and 4-ketozeaxanthin (adonixanthin) with trace amounts of astaxanthin from zeaxanthin. Comparison of maximum catalytic activities as well as selectivity experiments carried out in the presence of both utilizable substrates indicated that the CrtZ enzymes from marine bacteria converted canthaxanthin to astaxanthin preferentially, whereas the Erwinia CrtZ possessed a favorability to the formation of zeaxanthin from beta-carotene. The CrtW/BKT enzymes were not so defined in their substrate preference, responding readily to fluctuations in substrate levels. Other properties obtained indicated that the enzymes were strictly oxygen-requiring; and a cofactor mixture of 2-oxoglutarate, ascorbic acid, and Fe2+ was beneficial to activity. Based on enzymological data, a predicted pathway for astaxanthin biosynthesis is described, and it is proposed that CrtZ-like enzymes be termed carotenoid 3, (3')-beta-ionone ring hydroxylase and CrtW/BKT carotenoid 4, (4')-beta-ionone ring oxygenase.


Subject(s)
Bacterial Proteins/metabolism , Mixed Function Oxygenases/metabolism , Oxygenases/metabolism , Rhizobium/enzymology , beta Carotene/analogs & derivatives , Bacterial Proteins/genetics , Erwinia/genetics , Kinetics , Oxygen/metabolism , Rhizobium/genetics , Substrate Specificity , Xanthophylls , beta Carotene/biosynthesis
19.
Biochim Biophys Acta ; 1289(2): 203-8, 1996 Mar 15.
Article in English | MEDLINE | ID: mdl-8600974

ABSTRACT

Carotenoid biosynthesis in wild type Mucor circinelloides has been investigated and the biochemical characterisation of the MS1 and MS9 mutant strains, impaired in carotenoid formation, carried out. In liquid cultures, all strains produced carotenoids (mainly beta-carotene, but also xi-carotene, lycopene and gamma-carotene) at the onset of stationary phase of growth. Carotenogenesis was light dependent. In liquid cultures carotenoid formation in wild type was affected by diphenylamine, which prevented desaturation, nicotine, resulting in reduced carotenoid levels, but CPTA caused an increase in the total carotenoid content but a reduced beta-carotene level, with the accumulation of lycopene and gamma-carotene. The mutant strains MS1 and MS9 contained only 5.0 and 11.5% of wild type carotenoid levels, respectively. Cell extracts of light-grown mycelia, incubated with 3(R)-[2-14C] mevalonic acid, produced beta-carotene, but incorporations into carotenoids were substantially reduced in the cell extracts of MS1 and MS9. Analysis of prenyl diphosphate intermediates indicated that, compared to wild type, geranylgeranyl diphosphate accumulated in MS1. MS9 extracts produced a larger amount of prenyl phosphates and a more even distribution of radioactivity from mevalonic acid into farnesyl and geranylgeranyl diphosphates. Squalene and long chain prenyl phosphates were formed by the cell extracts of all strains. It is proposed that the MS1 strain possesses a mutation in a gene responsible for phytoene formation, whilst a regulatory mutation, affecting prenyl transferase activities has occurred in MS9.


Subject(s)
Carotenoids/biosynthesis , Mucor/metabolism , Mevalonic Acid/metabolism , Mutation , Polyisoprenyl Phosphates/metabolism
20.
J Biochem ; 116(5): 980-5, 1994 Nov.
Article in English | MEDLINE | ID: mdl-7896759

ABSTRACT

Full length and truncated cDNA expression constructs of the phytoene synthase (psy) gene from tomato have been ligated into a pUC8 cloning vector. One of the truncated constructs was introduced into Escherichia coli carrying the Erwinia uredovora GGPP synthase gene. This transformant produced 15,15'-cis-phytoene, which was identified on the basis of its UV and IR spectral data, from geranylgeranyl diphosphate. The function of this gene product was further confirmed by in vitro assay using cell-free extract of E. coli harboring the construct. On transformation with the above constructs together with a plasmid containing the carotenoid gene cluster from E. uredovora devoid of the phytoene synthase (crtB) gene, yellow, carotenoid-containing, E. coli colonies were produced. The amounts of carotenoids synthesized by the transformed cells, related to the steady-state levels of psy mRNA, varied depending upon the psy constructs. The full-length psy clone produced 16-fold less carotenoids per unit amount of RNA than cells containing phytoene synthase without the first 114 N-terminal amino acids. Removal of further amino acids from the N-terminus caused a large decrease in carotenogenesis. A Western blot of ripe fruit stroma with a monoclonal antibody raised against phytoene synthase revealed a single protein band of apparent molecular mass 38 kDa. Based upon this immunological evidence, we conclude that the size of the transit peptide of phytoene synthase from ripe tomato fruit is approximately 9 kDa, corresponding to about 80 amino acid residues.(ABSTRACT TRUNCATED AT 250 WORDS)


Subject(s)
Alkyl and Aryl Transferases , Carotenoids/biosynthesis , Carotenoids/metabolism , Transferases/genetics , Amino Acid Sequence , Base Sequence , Blotting, Western , Cloning, Molecular , Escherichia coli/genetics , Geranylgeranyl-Diphosphate Geranylgeranyltransferase , Solanum lycopersicum/genetics , Molecular Sequence Data , Polyisoprenyl Phosphates/metabolism , RNA, Messenger/analysis , Transferases/chemistry
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