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1.
Can J Microbiol ; 58(6): 738-51, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22616625

ABSTRACT

A collection of rhizobia isolated from Acacia tortilis subsp. raddiana nodules from various arid soils in Tunisia was analyzed for their diversity at both taxonomic and symbiotic levels. The isolates were found to be phenotypically diverse. The majority of the isolates tolerated 3% NaCl and grew at 40 °C. Genetic characterization emphasized that most of the strains (42/50) belong to the genus Ensifer, particularly the species Ensifer meliloti, Ensifer garamanticus, and Ensifer numidicus. Symbiotic properties of isolates showed diversity in their capacity to nodulate their host plant and to fix atmospheric nitrogen. The most effective isolates were closely related to E. garamanticus. Nodulation tests showed that 3 strains belonging to Mesorhizobium genus failed to renodulate their host plant, which is surprising for symbiotic rhizobia. Furthermore, our results support the presence of non-nodulating endophytic bacteria belonging to the Acinetobacter genus in legume nodules.


Subject(s)
Acacia/microbiology , Rhizobium/classification , Sinorhizobium meliloti/classification , Soil Microbiology , Symbiosis , Phylogeny , Rhizobium/genetics , Rhizobium/isolation & purification , Rhizobium/physiology , Sinorhizobium meliloti/genetics , Sinorhizobium meliloti/isolation & purification , Sinorhizobium meliloti/physiology , Soil/chemistry , Tunisia
2.
Arch Microbiol ; 193(6): 385-97, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21359955

ABSTRACT

Diversity of 50 bacterial isolates recovered from root nodules of Prosopis farcta grown in different arid soils in Tunisia, was investigated. Characterization of isolates was assessed using a polyphasic approach including phenotypic characteristics, 16S rRNA gene PCR--RFLP and sequencing, nodA gene sequencing and MLSA. It was found that most of isolates are tolerant to high temperature (40°C) and salinity (3%). Genetic characterization emphasizes that isolates were assigned to the genus Ensifer (80%), Mesorhizobium (4%) and non-nodulating endophytic bacteria (16%). Forty isolates belonging to the genus Ensifer were affiliated to Ensifer meliloti, Ensifer xinjiangense/Ensifer fredii and Ensifer numidicus species. Two isolates belonged to the genus Mesorhizobium. Eight isolates failing to renodulate their host plant were endophytic bacteria and belonged to Bacillus, Paenibacillus and Acinetobacter genera. Symbiotic properties of nodulating isolates showed a diversity in their capacity to infect their host plant and fix atmospheric nitrogen. Isolate PG29 identified as Ensifer meliloti was the most effective one. Ability of Prosopis farcta to establish symbiosis with rhizobial species confers an important advantage for this species to be used in reforestation programs. This study offered the first systematic information about the diversity of microsymbionts nodulating Prosopis farcta in the arid regions of Tunisia.


Subject(s)
Alphaproteobacteria/classification , Alphaproteobacteria/isolation & purification , Prosopis/microbiology , Rhizobiaceae/classification , Rhizobiaceae/isolation & purification , Root Nodules, Plant/microbiology , Acyltransferases/genetics , Alphaproteobacteria/genetics , Bacterial Proteins/genetics , DNA, Bacterial/genetics , Desert Climate , Genes, rRNA , Phylogeny , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , RNA, Ribosomal, 16S/genetics , Rhizobiaceae/genetics , Symbiosis , Tunisia
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