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1.
Spectrochim Acta A Mol Biomol Spectrosc ; 298: 122704, 2023 Oct 05.
Article in English | MEDLINE | ID: mdl-37120954

ABSTRACT

Red tides occur every year in the Qinhuangdao sea area of China, including a variety of toxic algae and non-toxic algae. Toxic red tide algae have caused great damage to the marine aquaculture industry in China and seriously endangered human health, but most of non-toxic algae are important bait for marine plankton. Therefore, it is very important to identify the type of mixed red tide algae in Qinhuangdao sea area. In this paper, three-dimensional fluorescence spectroscopy and chemometrics were applied to the identification of typical toxic mixed red tide algae in Qinhuangdao. Firstly, the three-dimensional fluorescence spectrum data of typical mixed red tide algae in Qinhuangdao sea area were measured by f-7000 fluorescence spectrometer, and the contour map of algae samples was obtained. Secondly, the contour spectrum analysis is carried out to find the excitation wavelength of the peak position of the three-dimensional fluorescence spectrum and form the new three-dimensional fluorescence spectrum data selected by the feature interval. Then, the new three-dimensional fluorescence spectrum data are extracted by principal component analysis (PCA). Finally, the feature extraction data and the data without feature extraction are used as the input of the genetic optimization support vector machine (GA-SVM) and particle swarm optimization support vector machine (PSO-SVM) classification models, respectively, to obtain the classification model of mixed red tide algae, and the two feature extraction analysis methods and two classification algorithms are compared. The results show that the classification accuracy of the test set using the principal component feature extraction and GA-SVM classification method is 92.97 %, when the excitation wavelengths are 420 nm, 440 nm, 480 nm, 500 nm and 580 nm, and the emission wavelengths are 650-750 nm. Therefore, it is feasible and effective to apply the three-dimensional fluorescence spectrum characteristics and genetic optimization support vector machine classification method to the identification of toxic mixed red tide algae in Qinhuangdao sea area.


Subject(s)
Algorithms , Harmful Algal Bloom , Humans , Spectrometry, Fluorescence/methods , Support Vector Machine , Principal Component Analysis
2.
Spectrochim Acta A Mol Biomol Spectrosc ; 268: 120711, 2022 Mar 05.
Article in English | MEDLINE | ID: mdl-34902694

ABSTRACT

Acccurate identification whether red tide has ithyotoxicity is very significant for microalgae monitoring. In order to realize the rapid and non-destructive detection of ichthyotoxic red tide algae, a detection method combining three-dimensional (3D) fluorescence spectrum and particle swarm optimization support vector machine (PSO-SVM) was developed to monitor the ichthyotoxic red tide algae with cell concentrations from 104 cells/mL to 106 cells/mL. The contour maps contracted form three-dimensional fluorescence spectra of six common species of ichthyotoxic algae and eight common species of non-ichthyotoxic algae,which are analyzed to select the optimal emission and excitation wavelength span. The new feature data are acquired by using the emission spectrum data at 480 nm and 510 nm excitation wavelengths. The new feature data are used as the input of particle swarm optimization support vector machine to establish the optimal classification model of ichthyotoxic algae, which achieves an classification accuracy of 100% for the test set. The optimal classification model is successfully applied to identify the ichthyotoxicity of different algae including Heterosigma akashiwo, Chattonella marina, Phaeocystis globosa, Prorocentrum donghaiense, Karenia dunnii, Isoscelina galbana, Isosceles globosa and Skeletonema costatum.


Subject(s)
Dinoflagellida , Microalgae , Fluorescence , Harmful Algal Bloom , Support Vector Machine
3.
Guang Pu Xue Yu Guang Pu Fen Xi ; 36(11): 3726-31, 2016 Nov.
Article in Chinese | MEDLINE | ID: mdl-30226704

ABSTRACT

A refractive index insensitive temperature sensor is proposed base on cascading single mode fiber with few mode fiber(FMF). During the sensor preparation, the splicing current is set to 100 mA, and a section of FMF is no core-offset splicing between two single-mode fibers. Therefore, it can motivate the transmission mode preferably and form optical fiber Mach-Zehnder interferometer. The mode phase difference in FMF will be changed according to the outside environment. It will cause interference fringe shift. The parameter to be measured can be achieved by detecting the amount shift of interference spectrum. The FMF can transmit four modes with LP01, LP11, LP21, LP02. The transmission spectrum is also analyzed, which shows that they have two modes of LP01 and LP11 in sensor with the length of 81.5 mm. In the refractive index and temperature sensing experiment, the cascading FMF sensor with the length of 81.5 mm is used. The results show that the transmission spectrum of sensor appears obvious blue shift as temperature is increasing, the temperature sensitivity can be up to -85.9 pm·â„ƒ-1 within the range of 27.6~93.8 ℃ with good linearity. The refractive index sensitivity is 3.697 34 nm·RIU-1 within the range of 1.347 1~1.443 9. There is no obvious shift phenomenon in the transmission spectrum with the feature of refractive index insensitive. Therefore, compared with the traditional cladding mode and multimode interferometric fiber-optic sensor, the proposed sensor based on FMF is easier to control and analyze transmission mode has the advantages of simple structure, easy process and high sensitivity. It can avoid cross-sensitivity between temperature and refractive index measurement. Thus, it can be used for temperature detection of power system, biomedicine, aerospace and other fields.

4.
Guang Pu Xue Yu Guang Pu Fen Xi ; 34(3): 717-20, 2014 Mar.
Article in Chinese | MEDLINE | ID: mdl-25208399

ABSTRACT

Configured standard solution of chemical oxygen demand with potassium hydrogen phthalate was used as experimental subjects, collected ultraviolet absorption spectra of the standard solution in the range of 1,800 mg x L(-1), were collected, and PLS (partial least squares) algorithm was used to establish the correction model of different spectral region, the results showed that. The model in the spectral region of 265-310 nm had the highest correlation and smallest error; In order to eliminate the impact of nitrates and temperature on the detection of the COD , studied the changes of the UV absorption spectrum with different concentrations of sodium standard solution and different temperature. The results showed that absorption of nitrate in 208-238 nm was apparent, and the model for spectral region of 265-310 nm was free from the influence of nitrate; In the full range of spectrum, temperature rising leads to an increase in absorbance, thus the temperature compensation model was established for the different spectral region through predictive analysis.

5.
Guang Pu Xue Yu Guang Pu Fen Xi ; 33(11): 3079-82, 2013 Nov.
Article in Chinese | MEDLINE | ID: mdl-24555385

ABSTRACT

Configuration standard solution in the concentration range of 1 - 25 mg x L(-1) of potassium hydrogen phthalate was used as experimental subject, Ultraviolet absorption spectra was collected, the COD quantitative analysis model was established by partial least squares with different pretreatment methods and the turbidity of the compensation effect analysis was given. The results show the model uses smoothing first derivative pretreatment method, internal cross validation RMSECV root mean square value of 0.122 27, principal component number 4, the square of the prediction model correlation coefficient is 0.999 8, and the relative prediction error is in the range of 0.03%-1.7%; for 0-100 NTU's turbidity solution, the relative standard deviation RSD is 2.3% after compensation; with pH in the range of 3-10, influence can be ignored.

6.
Guang Pu Xue Yu Guang Pu Fen Xi ; 32(4): 915-20, 2012 Apr.
Article in Chinese | MEDLINE | ID: mdl-22715752

ABSTRACT

This paper presents a novel algorithm which blends optimize particle swarm optimization (PSO) algorithm and Levenberg-Marquardt (LM) algorithm according to the probability. This novel algorithm can be used for Pseudo-Voigt type of Brillouin scattering spectrum to improve the degree of fitting and precision of shift extraction. This algorithm uses PSO algorithm as the main frame. First, PSO algorithm is used in global search, after a certain number of optimization every time there generates a random probability rand (0, 1). If rand (0, 1) is less than or equal to the predetermined probability P, the optimal solution obtained by PSO algorithm will be used as the initial value of LM algorithm. Then LM algorithm is used in local depth search and the solution of LM algorithm is used to replace the previous PSO algorithm for optimal solutions. Again the PSO algorithm is used for global search. If rand (0, 1) was greater than P, PSO algorithm is still used in search, waiting the next optimization to generate random probability rand (0, 1) to judge. Two kinds of algorithms are alternatively used to obtain ideal global optimal solution. Simulation analysis and experimental results show that the new algorithm overcomes the shortcomings of single algorithm and improves the degree of fitting and precision of frequency shift extraction in Brillouin scattering spectrum, and fully prove that the new method is practical and feasible.

7.
Guang Pu Xue Yu Guang Pu Fen Xi ; 31(6): 1486-9, 2011 Jun.
Article in Chinese | MEDLINE | ID: mdl-21847915

ABSTRACT

Chemical oxygen demand (COD) is a synthetical indicator which represents the degree of organic pollution in water. The near-infrared (NIR) transmission and the UV absorbance method based on photoelectric detection technology and spectroscopy analysis have some advantages such as high precision, speed, non-contact, no secondary pollution etc compared to conventional wet chemical method. The NIR transmission spectra and UV absorbance spectra of standard solution configured with phthalate hydrogen potassium were collected respectively by MPA FTIR spectrometer (Bruker Optics Inc.) made in Germany and AvaSpec-2048-2 UV spectrometer (Avantes Inc.) made in Netherlands. After different pretreatment to the spectra, COD quantitative analysis model was established using partial least squares regression (PLS) and linear regression. The statistical analysis of COD quantitative model was implemented, and the result showed that UV absorbance method had a higher relevance but lower forecast accuracy and precision than NIR transmission method.

8.
Article in Chinese | MEDLINE | ID: mdl-20232628

ABSTRACT

OBJECTIVE: To clone, express and characterize a tegument protein gene of Schistosoma japonicum (Sj29) , and investigate the immune protection of the recombinant protein against S. japonicum in mice. METHODS: The gene coding for Sj29 protein was amplified by PCR, and the sequence was analyzed by bioinformatics tools. Partial fragment of Sj29 gene was subcloned into the prokaryotic expression vector pET28c(+). The recombinant plasmid was transformed into E. coli BL21 (DE3) and induced the recombinant with IPTG. The recombinant protein (rSj29) was purified by His-binding-resin affinity chromatography and characterized by Western blotting. Three groups each with 10 BALB/c mice were immunized subcutaneously three times (two weeks interval) respectively with 100 microl recombinant rSj29 (0.1 mg/ml) , adjuvant or PBS. At the 15th day after the final inoculation, each mouse was challenged by 40 +/- 2 cercariae of S. japonicum. At the 53rd day after infection, the mice were sacrificed to obtain the number of adult worms, number of eggs in liver and feces. Serum samples were collected at pre-immunization and certain time after immunization, and were analyzed for IgG by ELISA. The localization of rSj29 in worms of different developmental stages was demonstrated by immunofluorescent technique. mRNA expression level of Sj29 gene in worms of different developmental stages and three groups after infection was detected by quantitative real-time PCR. RESULTS: A 576 bp Sj29 gene fragment was obtained. The recombinant protein rSj29 with Mr 22,900 was expressed in the form of inclusion body. The recombinant rSj29 can be recognized by sera of mice immunized with rSj29 and sera of infected mice. The number of adult worms (15.4 +/- 5.9), number of hepatic eggs (40,143.3 +/- 2,995.9) and number of fecal eggs (3,803.9 +/- 110.9) in recombinant protein group were significantly higher than those of PBS control group (20 +/- 3.4, 49,318.1 +/- 6,648.3, 5,238.1 +/- 303.5, respectively) (P < 0.05) . There was a high level of specific IgG against rSj29 (maximum dilution 1:32000) in recombinant protein group. Immunohistochemical analysis showed the Sj29 protein expressed on the surface of different stages of S. japonicum. mRNA level of Sj29 was the highest at the 32nd day post-infection. CONCLUSION: The recombinant protein rSj29 induces certain degree of protective immunity in mice.


Subject(s)
Helminth Proteins/immunology , Membrane Proteins/immunology , Schistosoma japonicum/genetics , Schistosomiasis japonica/immunology , Animals , Female , Helminth Proteins/genetics , Membrane Proteins/genetics , Mice , Mice, Inbred BALB C , Plasmids , Recombinant Proteins/genetics , Recombinant Proteins/immunology , Schistosoma japonicum/immunology , Schistosomiasis japonica/genetics
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