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1.
J Biosci Bioeng ; 103(2): 167-73, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17368400

ABSTRACT

Amylomaltase from Thermus aquaticus catalyzes three types of transglycosylation reaction, as well as a weak hydrolytic reaction of alpha-1,4 glucan. From our previous study [Fujii et al., Appl. Environ. Microbiol., 71, 5823-5827 (2005)], tyrosine 54 (Y54) was identified as an amino acid controlling the reaction specificity of this enzyme. Since Y54 is not located around the active site but in the proposed second glucan binding site that is 14 A away from catalytic residues, the functions of Y54 and the second glucan binding site are of great interest. In this study, we introduced mutations into another tyrosine (Y101) in the second glucan binding site. The obtained mutated enzymes were subjected to all four types of enzyme assay and the effects of mutations on the reaction specificities of these enzymes were comprehensively investigated. These studies indicated that the amino acid substitution at Y54 or Y101 for removing their aromatic side chain increases cyclization activity (intra-molecular transglycosylation reaction) but decreases disproportionation, coupling and hydrolytic activities (inter-molecular reactions). The superimposition of the reported structures of the enzyme with and without substrate analog revealed the occurrence of a conformational change in which a donor binding site becomes open. From lines of evidence, we conclude that the binding of glucan substrate to the second glucan binding site through an interaction with the aromatic side chains of Y54 and Y101 is a trigger for the enzyme to take a completely active conformation for all four types of activity, but prevents the cyclization reaction to occur since the flexibility of the glucan is restricted by such binding.


Subject(s)
Cyclodextrins/biosynthesis , Glucans/chemistry , Glycogen Debranching Enzyme System/chemistry , Thermus/enzymology , Binding Sites/genetics , Cyclodextrins/chemistry , Glycogen Debranching Enzyme System/genetics , Glycogen Debranching Enzyme System/isolation & purification , Mutation , Protein Conformation , Substrate Specificity , Tyrosine/chemistry , Tyrosine/genetics
2.
J Biotechnol ; 127(3): 496-502, 2007 Jan 10.
Article in English | MEDLINE | ID: mdl-16950538

ABSTRACT

This work aims to establish the enzymatic process to produce amylose from cellobiose. Incubation of cellobiose with cellobiose phosphorylase and alpha-glucan phosphorylase in the presence of maltotetraose and a catalytic amount of inorganic phosphate at 45 degrees C for 16 h resulted in the production of linear alpha-1,4-glucan with a 19.3% (w/v, against cellobiose weight) yield. The yield was successfully improved (32.4%) when mutarotase and glucose oxidase were added to remove glucose in the reaction mixture. The weight-average molecular weight of the product was precisely controlled from 42 to 720 kDa by changing the initial molar ratio of cellobiose to maltotetraose. The combined use of two different phosphorylases should be a useful tool in converting beta-1,4-linked-polysaccharide into alpha-1,4-linked-polysaccharide.


Subject(s)
Amylose/chemistry , Cellobiose/chemistry , Glucosyltransferases/chemistry , Phosphorylases/chemistry , Carbohydrate Epimerases/chemistry , Glucose Oxidase/chemistry , Recombinant Proteins/chemistry
3.
Appl Environ Microbiol ; 71(10): 5823-7, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16204493

ABSTRACT

Amylomaltase from Thermus aquaticus catalyzes intramolecular transglycosylation of alpha-1,4 glucans to produce cyclic alpha-1,4 glucans (cycloamyloses) with degrees of polymerization of 22 and higher. Although the amylomaltase mainly catalyzes the transglycosylation reaction, it also has weak hydrolytic activity, which results in a reduction in the yield of the cycloamyloses. In order to obtain amylomaltase with less hydrolytic activity, random mutagenesis was perfromed for the enzyme gene. Tyr54 (Y54) was identified as the amino acid involved in the hydrolytic activity of the enzyme. When Y54 was replaced with all other amino acids by site-directed mutagenesis, the hydrolytic activities of the mutated enzymes were drastically altered. The hydrolytic activities of the Y54G, Y54P, Y54T, and Y54W mutated enzymes were remarkably reduced compared with that of the wild-type enzyme, while those of the Y54F and Y54K mutated enzymes were similar to that of the wild-type enzyme. Introducing an amino acid replacement at Y54 also significantly affected the cyclization activity of the amylomaltase. The Y54A, Y54L, Y54R, and Y54S mutated enzymes exhibited cyclization activity that was approximately twofold higher than that of the wild-type enzyme. When the Y54G mutated enzyme was employed for cycloamylose production, the yield of cycloamyloses was more than 90%, and there was no decrease until the end of the reaction.


Subject(s)
Cyclodextrins/biosynthesis , Glycogen Debranching Enzyme System/genetics , Glycogen Debranching Enzyme System/metabolism , Thermus/enzymology , Amino Acid Substitution , Industrial Microbiology/methods , Mutagenesis , Protein Engineering/methods , Thermus/genetics
4.
Appl Environ Microbiol ; 71(9): 5433-9, 2005 Sep.
Article in English | MEDLINE | ID: mdl-16151135

ABSTRACT

The thermostability of potato type L alpha-glucan phosphorylase (EC 2.4.1.1) was enhanced by random and site-directed mutagenesis. We obtained three single-residue mutations-Phe39-->Leu (F39L), Asn135-->Ser (N135S), and Thr706-->Ile (T706I)-by random mutagenesis. Although the wild-type enzyme was completely inactivated, these mutant enzymes retained their activity even after heat treatment at 60 degrees C for 2 h. Combinations of these mutations were introduced by site-directed mutagenesis. The simultaneous mutation of two (F39L/N135S, F39L/T706I, and N135S/T706I) or three (F39L/N135S/T706I) residues further increased the thermostability of the enzyme, indicating that the effect of the replacement of the residues was cumulative. The triple-mutant enzyme, F39L/N135S/T706I, retained 50% of its original activity after heat treatment at 65 degrees C for 20 min. Further analysis indicated that enzymes with a F39L or T706I mutation were resistant to possible proteolytic degradation.


Subject(s)
Amino Acid Substitution , Hot Temperature , Phosphorylases/chemistry , Phosphorylases/genetics , Solanum tuberosum/enzymology , Enzyme Stability , Industrial Microbiology/methods , Kinetics , Models, Molecular , Mutagenesis, Site-Directed , Phosphorylases/metabolism
5.
Article in English | MEDLINE | ID: mdl-16508106

ABSTRACT

Disproportionating enzyme (D-enzyme; EC 2.4.1.25) is a 59 kDa protein that belongs to the alpha-amylase family. D-enzyme catalyses intramolecular and intermolecular transglycosylation reactions of alpha-1,4 glucan. A crystal of the D-enzyme from potato was obtained by the hanging-drop vapour-diffusion method. Preliminary X-ray data showed that the crystal diffracts to 2.0 A resolution and belongs to space group C222(1), with unit-cell parameters a = 69.7, b = 120.3, c = 174.2 A.


Subject(s)
Glycogen Debranching Enzyme System/chemistry , Solanum tuberosum/enzymology , Base Sequence , Cloning, Molecular , Crystallization , Crystallography, X-Ray , DNA Primers , Glycogen Debranching Enzyme System/isolation & purification , Glycosylation , Plant Proteins/chemistry , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , X-Ray Diffraction
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