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1.
Rinsho Byori ; 59(3): 213-8, 2011 Mar.
Article in Japanese | MEDLINE | ID: mdl-21560401

ABSTRACT

Following recent advance in medical technology, the increase of immunocompromised patients results in an increase of opportunistic infections such as nocardiosis. However, little is known about relationships between clinical features of nocardial infections and each Nocardia species, especially newly identified ones. Therefore, we identified clinical isolates of Nocardia species by genetic methods and analyzed clinical features of nocardiosis. Nine clinical isolates were obtained in Kyushu University Hospital from 2005 to 2008. Six different Nocardia species were identified by 16Sr RNA: Nocardiafarcinia (n=2), Nocardia brasiliensis (n=2), Nocardia cyriacigeorgica (n=2), Nocardia transvalensis (n=1), Nocardia araoensis (n=1) and Nocardia testacea (n=1). The underlying diseases of 9 patients were pulmonary diseases(n=5), malignant diseases(n=3), collagen diseases(n=1) or primary immunodeficiency diseases (n=l). According to antimicrobial susceptibility testing, none of them was resistant to minocycline or linezolid. Among seven isolates from respiratory specimens, one was resistant to imipenem, sulfamethoxazole/trimethoprim and amikacin, two were to ciprofloxacin. Three species identified recently (N cyriacigeorgica, N. araoensis and N. testacea) were involved in this study and most of them were considered as infectious pathogens to human. These data suggested the identification of Nocardia to the species level and susceptibility testing were important for diagnosis as infectious diseases and treatments.


Subject(s)
Nocardia Infections/microbiology , Nocardia/drug effects , Nocardia/isolation & purification , Adult , Aged , Aged, 80 and over , Anti-Bacterial Agents/pharmacology , Collagen Diseases/complications , Drug Resistance, Bacterial , Female , Humans , Immunocompromised Host , Immunologic Deficiency Syndromes/complications , Lung Diseases/complications , Male , Microbial Sensitivity Tests , Middle Aged , Neoplasms/complications , Nocardia/classification , Nocardia/genetics , Nocardia Infections/complications , Opportunistic Infections/complications , RNA, Bacterial , RNA, Ribosomal, 16S
2.
Int J Antimicrob Agents ; 35(5): 444-50, 2010 May.
Article in English | MEDLINE | ID: mdl-20188525

ABSTRACT

A significant problem in the field of infectious diseases is the increase in fluoroquinolone (FQ)-resistant Escherichia coli. Although mutation of strains and clonal dissemination are supposed to be the cause of this increase, little is known about the prevalence of this organism. We investigated 219 FQ-resistant E. coli strains in Japan and nine Asian countries by serotyping and genotyping. Seventy-one strains (32.4%) were serogroup O25, which was prevalent in South Korea, China and Japan, especially in the southwest part of Japan. Aerobactin, a virulence factor in uropathogenic and avian pathogenic E. coli, was associated with the presence of FQ-resistant O25 strains of E. coli. Seven of the seventy-one FQ-resistant E. coli O25 had extended-spectrum beta-lactamase genes (six CTX-M-14 and one SHV-12), however, we were unable to find any E. coli O25-ST131 clone that produced CTX-M-15, which was previously reported to have emerged across continents. These data demonstrate that a clonal group of FQ-resistant and virulent E. coli recently became prevalent at least in East Asia and suggest that this might become a public health problem because the strains may acquire resistance to other antimicrobial agents.


Subject(s)
Bacterial Typing Techniques , Ciprofloxacin/pharmacology , Drug Resistance, Bacterial , Escherichia coli Infections/epidemiology , Escherichia coli Proteins/genetics , Escherichia coli/classification , Virulence Factors/genetics , Anti-Bacterial Agents/pharmacology , Cluster Analysis , Electrophoresis, Gel, Pulsed-Field , Escherichia coli/drug effects , Escherichia coli/isolation & purification , Escherichia coli Infections/microbiology , Asia, Eastern/epidemiology , Genotype , Humans , Hydroxamic Acids , Sequence Analysis, DNA , Serotyping , beta-Lactamases/genetics
3.
Int J Antimicrob Agents ; 35(4): 387-91, 2010 Apr.
Article in English | MEDLINE | ID: mdl-20138480

ABSTRACT

Fluoroquinolone (FQ) resistance is usually caused by point mutations within the quinolone resistance-determining regions (QRDRs) of gyrA, gyrB, parC and/or parE. However, little is known about the worldwide increase in FQ-resistant Escherichia coli or, more specifically, about the geographical distribution of QRDR mutations and the clonal spread of isolates. In this study, we analysed 68 FQ-resistant E. coli isolates from eight Asian countries using QRDR amino acid mutation patterns and examined their susceptibility to FQs. Of the isolates, 38% had mutations at S83 and D87 of GyrA and S80 of ParC (MM/-/M-/-) and 34% had mutations at S83 and D87 of GyrA, S80 of ParC and S458 of ParE (MM/-/M-/M). MIC(50) values (minimum inhibitory concentrations for 50% of the isolates) for isolates with at least mutation at S458 of ParE for ciprofloxacin and prulifloxacin were relatively higher than MIC(50) values of isolates without this mutation. Based on their geographic distribution and the QRDR mutation patterns, the isolates were divided into a common type in which the organisms were isolated from three or more countries, and a local type in which the isolates were from one or two countries. Mutation types at S83L and D87N in GyrA and S80I in ParC with no or another site in the QRDR were the most frequent among the FQ-resistant isolates, especially among the common type. Gene typing indicated that isolates in the common type were not similar between countries. These data suggest that the increase in FQ-resistant E. coli strains is mainly generated by mutations in the QRDR in each geographical area rather than through intercontinental spread.


Subject(s)
Anti-Bacterial Agents/pharmacology , Drug Resistance, Bacterial , Escherichia coli Infections/epidemiology , Escherichia coli Infections/microbiology , Escherichia coli/drug effects , Fluoroquinolones/pharmacology , Asia/epidemiology , Bacterial Typing Techniques , DNA Fingerprinting , Electrophoresis, Gel, Pulsed-Field , Escherichia coli/classification , Escherichia coli/genetics , Escherichia coli/isolation & purification , Escherichia coli Proteins/genetics , Genotype , Geography , Humans , Microbial Sensitivity Tests , Mutation, Missense
4.
Rinsho Byori ; 57(2): 146-55, 2009 Feb.
Article in Japanese | MEDLINE | ID: mdl-19317220

ABSTRACT

Recently, the transparency of customer service and organization administration has been required in many fields. Objective evaluation by a third person is necessary. This also applies to medical institutions; whether the responsibility for explanation to patients and the transparency of medical activities are open is currently emphasized. ISO15189, which specifically applies to clinical laboratories, is an international standard issued in 2003. This standard has commonly been employed as an accreditation tool for clinical laboratories in Europe and Australia. In Japan, the Japan Accreditation Board for Conformity Assessment (JAB) introduced this system as an accreditation tool for clinical laboratories in cooperation with the Japanese Committee for Clinical Laboratory Standards (JCCLS) in 2004. In April 2005, accreditation work was started. Among the ISO systems, ISO15189 is perhaps the first standard specialized in the field of medical practice. This reflects the fact that the importance of clinical examination is internationally recognized. In this report, we summarize the process via which our laboratory was awarded this ISO and the situation in which we passed two surveillances.


Subject(s)
Accreditation/standards , Laboratories, Hospital/standards , Japan , Laboratories, Hospital/organization & administration , Total Quality Management
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