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1.
Anal Sci ; 28(2): 103-6, 2012.
Article in English | MEDLINE | ID: mdl-22322801

ABSTRACT

Many empirical parameters have been suggested to measure solvent effects in chemical reactions. Gutmann's donor number has been a successful parameter to quantify the electron-donating property of the solvent molecule; it is defined as the enthalpy change of the addition reaction of solvent molecule to SbCl(5) in 1,2-dichloroethane. Calorimetric measurements can be applied to determine the quantity. Because the existence of water is critical for reactions in organic solvents, we have analyzed the enthalpy change using the titration calorimetry while considering the complexation with water. The determined donor numbers of formamide, N,N-dimethylformamide (DMF), dimethyl sulfoxide (DMSO), and 1,1,3,3-tetramethylurea (TMU) are 22.4, 26.5, 30.0, and 40.4, respectively. The values of DMF and DMSO are in perfect agreement with those of Gutmann. A reliable value for TMU is obtained for the first time on the basis of the enthalpy change for the addition reaction.

2.
J Comput Chem ; 27(16): 1944-9, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17019720

ABSTRACT

The first row transition metal ions Mn(2+), Co(2+), and Ni(2+) have been studied by classical umbrella sampling molecular dynamics simulations. The water exchange mechanisms, estimates of reaction rates, as well as structural changes during the activation process are discussed. Mn(2+) was found to react via an I(A) mechanism, whereas Co(2+) and Ni(2+) both proceed via I(D). Reaction rate constants are generally higher than those obtained by experiment but the simply constructed metal(II) ion-water potential reproduces the relative order quite well.


Subject(s)
Cobalt/chemistry , Computer Simulation , Manganese/chemistry , Models, Chemical , Nickel/chemistry , Ions/chemistry , Quantum Theory , Solutions/chemistry , Water/chemistry
3.
J Phys Chem B ; 110(11): 5690-6, 2006 Mar 23.
Article in English | MEDLINE | ID: mdl-16539514

ABSTRACT

The water exchange dynamics of the fourfold coordinated first hydration shell of the lithium(I) ion was studied by both direct and umbrella sampling QM/MM-MD and classical MD simulations. The structural changes and energetics accompanying the activation process are discussed. The overall exchange rate constant was found to be k(ex) = 5.8 x 10(9) s(-1) from classical MD simulations. QM/MM-MD umbrella sampling simulations predict an exchange rate constant of k(TST) = 1.01 x 10(10) s(-1) as obtained from classical transition-state theory. First-shell ligands exchange preferably via an associatively activated mode.


Subject(s)
Computer Simulation , Lithium/chemistry , Water/chemistry , Cations/chemistry , Kinetics , Ligands , Solutions/chemistry
4.
Inorg Chem ; 41(17): 4555-9, 2002 Aug 26.
Article in English | MEDLINE | ID: mdl-12184774

ABSTRACT

The enthalpy differences (Delta H degrees ) of the equilibrium between the octahedral and tetrahedral solvated cobalt(II) complexes were obtained in some primary alkylamines such as propylamine (pa, 36.1 +/- 2.3 kJ mol(-1)), n-hexylamine (ha, 34.9 +/- 1.0 kJ mol(-1)), 2-methoxyethylamine (meea, 44.8 +/- 3.1 kJ mol(-1)), and benzylamine (ba, 50.1 +/- 3.6 kJ mol(-1)) by the spectrophotometric method. The differences in the energy levels between the two geometries of the cobalt(II) complexes in the spherically symmetric field (Delta E(spher)) were estimated from the values of Delta H degrees by offsetting the ligand field stabilization energies. It was indicated that the value of Delta E(spher) is the decisive factor in determining the value of Delta H degrees and is largely dependent on the electronic repulsion between the d-electrons and the donor atoms and the interelectronic repulsion in the d orbitals. The comparison between activation enthalpies (Delta H(++)) for the solvent exchange reactions of octahedral cobalt(II) ions in pa and meea revealed that the unexpectedly large rate constant and small Delta H(++) in pa are attributed to the strong electronic repulsion in the ground state and removal of the electronic repulsion in the dissociative transition state, which can give the small Delta E(spher) between the ground and transition states. Differences in the solvent exchange rates and the DeltaH(++) values of the octahedral metal(II) ions in some other solvents are discussed in connection with the electronic repulsive factors.

5.
Inorg Chem ; 38(14): 3352-3360, 1999 Jul 12.
Article in English | MEDLINE | ID: mdl-11671071

ABSTRACT

Reduction reactions of Cu(dmp)(2)(2+) (dmp = 2,9-dimethyl-1,10-phenanthroline) by ferrocene (Fe(Cp)(2) = bis(cyclopentadienyl)iron(II)), decamethylferrocene (Fe(PMCp)(2) = bis(pentamethylcyclopentadienyl)iron(II)), and Co(bpy)(3)(2+) (bpy = 2,2'-bipyridine) and oxidation reactions of Cu(dmp)(2)(+) by Ni(tacn)(2)(3+) (tacn = 1,4,7-triazacyclononane) and Mn(bpyO(2))(3)(3+) (bpyO(2) = N,N'-dioxo-2,2'-bipyridine) were studied in acetonitrile for the purpose of interpreting the gated behavior involving copper(II) and -(I) species. It was shown that the electron self-exchange rate constants estimated for the Cu(dmp)(2)(2+/+) couple from the oxidation reaction of Cu(dmp)(2)(+) by Ni(tacn)(2)(3+) (5.9 x 10(2) kg mol(-)(1) s(-)(1)) and Mn(bpyO(2))(3)(3+) (2.9 x 10(4) kg mol(-)(1) s(-)(1)) were consistent with the directly measured value by NMR (5 x 10(3) kg mol(-)(1) s(-)(1)). In contrast, we obtained the electron self-exchange rate constant of Cu(dmp)(2)(2+/+) as 1.6 kg mol(-)(1) s(-)(1) from the reduction of Cu(dmp)(2)(2+) by Co(bpy)(3)(2+). The pseudo-first-order rate constant for the reduction reaction of Cu(dmp)(2)(2+) by Fe(Cp)(2) was not linear against the concentration of excess amounts of Fe(Cp)(2). A detailed analysis of the reaction revealed that the reduction of Cu(dmp)(2)(2+) involved the slow path related to the deformation of Cu(dmp)(2)(2+) (path B in Scheme 1). By using Fe(PMCp)(2) (the E degrees value is 500 mV more negative than that of Fe(Cp)(2)(+/0)) as the reductant, the mixing with another pathway involving deformation of Cu(dmp)(2)(+) (path A in Scheme 1) became more evident. The origin of the "Gated Behavior" is discussed by means of the energy differences between the "normal" and deformed Cu(II) and Cu(I) species: the difference in the crystal field activation energies corresponding to the formation of pseudo-tetrahedral Cu(II) from tetragonally distorted Cu(II) and the difference in the stabilization energies of the tetrahedral and tetragonal Cu(I) for the activation of Cu(I) species. The reduction reaction of Cu(dmp)(2)(2+) by Fe(PMCp)(2) confirmed that the mixing of the two pathways takes place by lowering the energy level corresponding to the less favorable conformational change of Cu(I) species.

6.
Inorg Chem ; 37(21): 5519-5526, 1998 Oct 19.
Article in English | MEDLINE | ID: mdl-11670696

ABSTRACT

The formation of a sitting-atop (SAT) complex of Cu(II) ion with 5,10,15,20-tetraphenylporphyrin (H(2)tpp) in acetonitrile has been observed, and the kinetic parameters for the formation were determined as follows: k(S0) = (3.6 +/- 0.1) x 10(5) mol(-)(1) dm(3) s(-)(1) at 25.0 degrees C, DeltaH(S0)() = 56 +/- 5 kJ mol(-)(1), and DeltaS(S0)() = 46 +/- 19 J mol(-)(1) K(-)(1). The (1)H NMR spectrum of the SAT complex (Cu(H(2)tpp)(2+)) indicated that two pyrrolenine nitrogens coordinate to the Cu(II) ion and that two protons bound to the pyrrole nitrogens remain. The protons were abstracted by the addition of pyridine (py) as the Brønsted base to give the Cu(tpp) metalloporphyrin. In the presence of py, the product for the reaction of the Cu(II) ion with H(2)tpp was Cu(tpp) instead of the SAT complex. The observed conditional rates for the formation of Cu(H(2)tpp)(2+) and Cu(tpp) were interpreted by the contribution of Cu(2+), Cu(py)(2+), and Cu(py)(2)(2+) species, and the second-order rate constants of the SAT complex formation were k(S1) = (3.5 +/- 0.3) x 10(4) mol(-)(1) dm(3) s(-)(1) for Cu(py)(2+) and k(S2) = 90 +/- 2 mol(-)(1) dm(3) s(-)(1) for Cu(py)(2)(2+). Deprotonation rates were measured by following the reaction between the SAT complex and py as a function of the py concentration, and the second-order rate constant was determined to be (2.3 +/- 0.1) x 10(2) mol(-)(1) dm(3) s(-)(1). The present kinetic results have indicated that the SAT complex exists during the course of the metalation process and that the SAT complex formation is a rate-determining step.

7.
Inorg Chem ; 35(5): 1338-1342, 1996 Feb 28.
Article in English | MEDLINE | ID: mdl-11666329

ABSTRACT

Solvated cobalt(II) ions in neat 1,3-propanediamine (tn) and n-propylamine (pa) have been characterized by electronic absorption spectroscopy and extended X-ray absorption fine structure (EXAFS) spectroscopy. The equilibrium between tetrahedral and octahedral geometry for cobalt(II) ion has been observed in a neat pa solution, but not in neat diamine solutions such as tn and ethylenediamine (en). The thermodynamic parameters and equilibrium constant at 298 K for the geometrical equilibrium in pa were determined to be DeltaH degrees = -36.1 +/- 2.3 kJ mol(-1), DeltaS degrees = -163 +/- 8 J mol(-1) K(-1), and K(298) = 6.0 x 10(-3) M(-2), where K = [Co(pa)(6)(2+)]/{[Co(pa)(4)(2+)][pa](2)}. The equilibrium is caused by the large entropy gain in formation of the tetrahedral cobalt(II) species. The solvent exchange of cobalt(II) ion with octahedral geometry in tn and pa solutions has been studied by the (14)N NMR line-broadening method. The activation parameters and rate constants at 298 K for the solvent exchange reactions are as follows: DeltaH() = 49.3 +/- 0.9 kJ mol(-1), DeltaS() = 25 +/- 3 J mol(-1) K(-1), DeltaV() = 6.6 +/- 0.3 cm(3) mol(-1) at 302.1 K, and k(298) = 2.9 x 10(5) s(-1) for the tn exchange, and DeltaH() = 36.2 +/- 1.2 kJ mol(-1), DeltaS() = 35 +/- 6 J mol(-1) K(-1), and k(298) = 2.0 x 10(8) s(-1) for the pa exchange. By comparison of the activation parameters with those for the en exchange of cobalt(II) ion, it has been confirmed that the kinetic chelate strain effect is attributed to the large activation enthalpy for the bidentate chelate opening and that the enthalpic effect is smaller in the case of the six-membered tn chelate compared with the five-membered en chelate.

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