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1.
Appl Environ Microbiol ; 65(4): 1548-55, 1999 Apr.
Article in English | MEDLINE | ID: mdl-10103249

ABSTRACT

The fluvial deposition of mine tailings generated from historic mining operations near Butte, Montana, has resulted in substantial surface and shallow groundwater contamination along Silver Bow Creek. Biogeochemical processes in the sediment and underlying hyporheic zone were studied in an attempt to characterize interactions consequential to heavy-metal contamination of shallow groundwater. Sediment cores were extracted and fractionated based on sediment stratification. Subsamples of each fraction were assayed for culturable heterotrophic microbiota, specific microbial guilds involved in metal redox transformations, and both aqueous- and solid-phase geochemistry. Populations of cultivable Fe(III)-reducing bacteria were most prominent in the anoxic, circumneutral pH regions associated with a ferricrete layer or in an oxic zone high in organic carbon and soluble iron. Sulfur- and iron-oxidizing bacteria were distributed in discrete zones throughout the tailings and were often recovered from sections at and below the anoxic groundwater interface. Sulfate-reducing bacteria were also widely distributed in the cores and often occurred in zones overlapping iron and sulfur oxidizers. Sulfate-reducing bacteria were consistently recovered from oxic zones that contained high concentrations of metals in the oxidizable fraction. Altogether, these results suggest a highly varied and complex microbial ecology within a very heterogeneous geochemical environment. Such physical and biological heterogeneity has often been overlooked when remediation strategies for metal contaminated environments are formulated.

2.
Environ Manage ; 21(2): 233-8, 1997 Mar.
Article in English | MEDLINE | ID: mdl-9008074

ABSTRACT

/ The functional diversity of soil microbial communities in heavilyimpacted subalpine campsites and adjacent undisturbed areas was comparedusing the Biolog method of carbon utilization profiles. Principal componentsanalysis of patterns and level of microbial activity indicate that microbialcommunities differentiate in response to disturbance in the top 6 cm of soil,while below 6 cm there were no recognizable differences between disturbed andundisturbed soil communities. Analysis of the factors that differentiate theupper microbial communities between disturbed and undisturbed sites revealedthat the percent of total carbon sources utilized was significantly less inthe disturbed (54%) than in undisturbed areas (95%). Carbonsubstrates important in the discrimination between soil communities includeplant, invertebrate, and microbial derivatives that could not be metabolizedby microbial communities from disturbed sites. Comparisons of totalculturable actinomycetes, bacteria, and fungi reveal no difference in overallnumber of colony forming units (CFU) on disturbed and undisturbed sites, buta marked decrease in actinomycetes on disturbed sites. Biolog andspread-plate data combined indicate a shift in the structure and function ofthe microbial community in campsite soils, which may be a useful indicator ofsoil community disturbance.KEY WORDS: Microbial functional diversity; Anthropogenic disturbance;Recreational impacts; Carbon source profile; Subalpine

3.
Fungal Genet Biol ; 21(1): 30-9, 1997 Feb.
Article in English | MEDLINE | ID: mdl-9073478

ABSTRACT

A flux analysis of glucose metabolism in the filamentous fungus Rhizopus oryzae was achieved using a specific radioactivity curve-matching program, TFLUX. Glycolytic and tricarboxylic acid cycle intermediates labeled through the addition of extracellular [U-14C]glucose were isolated and purified for specific radioactivity determinations. This information, together with pool sizes and the rates of glucose utilization and end product production, provided input for flux maps of the metabolic network under two different experimental conditions. Based upon the flux analysis of this system, a mutant of R. oryzae with higher lactate and lower ethanol yields than the parent was sought for and found.

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