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1.
Eur J Clin Microbiol Infect Dis ; 32(5): 621-5, 2013 May.
Article in English | MEDLINE | ID: mdl-23232977

ABSTRACT

This study compared Neo-Sensitabs with Oxoid paper disks using the European Committee on Antimicrobial Susceptibility Testing (EUCAST) disk diffusion antimicrobial susceptibility test on Mueller-Hinton agar. The EUCAST-recommended quality control strains (Escherichia coli ATCC 25922, Pseudomonas aeruginosa ATCC 27853, Staphylococcus aureus ATCC 29213 and Enterococcus faecalis ATCC 29212) (Part I) and clinical isolates (Part II) were investigated. In Part I of the study, 27 combinations of antimicrobial agents were tested on four quality control strains repeatedly up to 60 times and zone diameters of tablets and disks were compared. In Part II of the study, 351 clinical isolates were included to cover a broad range of species, as well as resistance mechanisms. In Part I, four major deviations (>1 mm outside quality control ranges) were observed with Neo-Sensitabs. In one case with P. aeruginosa ATCC 27853 (meropenem), there was a corresponding major deviation (2 mm) with the Oxoid disk. The three remaining major deviations with Neo-Sensitabs were observed with meropenem (2 mm) in E. coli ATCC 25922 and with ciprofloxacin (2 mm) and gentamicin (3 mm) in P. aeruginosa ATCC 27853. For Oxoid disks, there were only minor deviations (=1 mm outside quality control ranges) in these three cases. In Part II, there were six discrepancies, susceptible versus resistant, in 3,533 comparisons between the two methods with the clinical isolates. The Rosco Neo-Sensitabs appear to be a possible alternative to Oxoid paper disks for EUCAST disk diffusion antimicrobial susceptibility testing on Mueller-Hinton agar.


Subject(s)
Anti-Infective Agents/pharmacology , Bacteria/drug effects , Disk Diffusion Antimicrobial Tests/instrumentation , Disk Diffusion Antimicrobial Tests/methods , Agar , Bacterial Infections/microbiology , Culture Media , Disk Diffusion Antimicrobial Tests/standards , Humans
2.
Euro Surveill ; 17(5)2012 Feb 02.
Article in English | MEDLINE | ID: mdl-22321137

ABSTRACT

Denmark experienced two waves of Mycoplasma pneumoniae infection during autumn and early winter in 2010 and 2011, respectively. Both affected the whole country. The proportion of positive results was almost the same for both, indicating that the two waves were probably of equal size. High macrolide consumption during the epidemics did not seem to affect levels of macrolide resistance in M. pneumoniae, which remain low in Demark (1% to 3%).


Subject(s)
Epidemics/statistics & numerical data , Mycoplasma pneumoniae/isolation & purification , Pneumonia, Mycoplasma/epidemiology , Anti-Bacterial Agents/therapeutic use , Denmark/epidemiology , Drug Resistance, Bacterial , Drug Utilization/statistics & numerical data , Humans , Incidence , Macrolides/therapeutic use , Mycoplasma pneumoniae/drug effects , Pneumonia, Mycoplasma/diagnosis , Pneumonia, Mycoplasma/drug therapy , Population Surveillance
3.
Eur J Clin Microbiol Infect Dis ; 30(11): 1409-16, 2011 Nov.
Article in English | MEDLINE | ID: mdl-21607825

ABSTRACT

Different molecular methods for the discrimination of Candida glabrata, C. bracarensis and C. nivariensis were evaluated and the prevalence of these species among Danish blood isolates investigated. Control strains were used to determine fragment length polymorphism in the ITS1, ITS2, ITS1-5.8S-ITS2 regions and in the D1/D2 domain of 26S rDNA using primers designed for this study. A total of 133 blood isolates previously identified as C. glabrata were examined by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) and the peptide nucleic acid-fluorescent in situ hybridization (PNA-FISH) method. The size of ITS1 allowed differentiation between C. glabrata (483), C. nivariensis (361) and C. bracarensis (385), whereas the ITS2 region was of similar size in C. nivariensis (417) and C. glabrata (418). Sequence analysis of the ITS region suggested that many restriction enzymes were suitable for RFLP differentiation of the species. Enzymatic digestion of the D1/D2 domain with TatI produced unique band sizes for each of the three species. PCR-RFLP and PNA-FISH were in agreement for all of the isolates tested. None of the 133 Danish blood isolates were C. nivariensis or C. bracarensis. Fragment size polymorphism of ITS1 and RFLP of the D1/D2 domain or the ITS region are useful methods for the differentiation of the species within the C. glabrata group. C. bracarensis and C. nivariensis are rare among Danish C. glabrata blood isolates.


Subject(s)
Candida/classification , Candidemia/microbiology , Mycological Typing Techniques/methods , Polymorphism, Restriction Fragment Length/genetics , Candida/genetics , Candida/isolation & purification , Candidemia/diagnosis , Candidemia/epidemiology , DNA Primers , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Ribosomal/genetics , DNA, Ribosomal Spacer/chemistry , DNA, Ribosomal Spacer/genetics , Denmark/epidemiology , Humans , In Situ Hybridization, Fluorescence , Molecular Sequence Data , Polymerase Chain Reaction , Prevalence , RNA, Ribosomal/genetics , Sequence Analysis, DNA , Species Specificity
4.
Eur J Clin Microbiol Infect Dis ; 30(11): 1355-63, 2011 Nov.
Article in English | MEDLINE | ID: mdl-21541671

ABSTRACT

A three-month laboratory-based prospective survey was conducted at four major university hospitals covering one-third of the Danish population in order to determine the prevalence, significance, and susceptibility pattern of aspergilli in airway samples. Samples received in January-March 2007 for routine microbiologic investigation were examined for Aspergillus following routine procedures and with extended incubation (5 days). Identification was done by morphologic criteria and susceptibility testing using EUCAST method for azoles and amphotericin B E-test. Invasive aspergillosis (IA) was evaluated using modified EORTC/MSG criteria. A total of 11,368 airway samples were received. Growth of Aspergillus spp. was found in 129 and 151 patients using routine and extended incubation, respectively. Three patients had proven IA (2%), 11 probable (7%), four had allergic bronchopulmonary aspergillosis (ABPA) (3%), but the majority was colonised (88%). Underlying conditions were cystic fibrosis in 82 patients (55%), chronic obstructive pulmonary disease in 19 (13%) and haematological disorder in 11 (7%). Twenty-six patients (18%) were at intensive care unit and 69 (47%) received steroid treatment. Azole MICs were elevated for five isolates as follows (itraconazole, posaconazole, voriconazole MICs [mg/L]): two A. fumigatus isolates (>4; >4; 2 and >4; 0.125; 1), one A. lentulus isolate (2; 2; 0.5) and two A. terreus isolates (2; 2; 2 and 2; 0.125; 1). For four isolates the amphotericin B MIC was >1 µg/ml (3/112 A. fumigatus, 1/2 A. terreus). In conclusion, Aspergillus appears to be an important pathogen in Denmark. Elevated itraconazole MICs were detected in 4% of the isolates including a multi-azole resistant isolate.


Subject(s)
Antifungal Agents/pharmacology , Aspergillosis/epidemiology , Aspergillus/isolation & purification , Respiratory System/microbiology , Respiratory Tract Infections/epidemiology , Adolescent , Adult , Aged , Aged, 80 and over , Amphotericin B/pharmacology , Amphotericin B/therapeutic use , Antifungal Agents/therapeutic use , Aspergillosis/diagnosis , Aspergillosis/drug therapy , Aspergillosis/microbiology , Aspergillus/drug effects , Child , Child, Preschool , Denmark/epidemiology , Drug Resistance, Fungal/drug effects , Female , Hospitals , Humans , Itraconazole/pharmacology , Itraconazole/therapeutic use , Male , Microbial Sensitivity Tests , Middle Aged , Prevalence , Prospective Studies , Pyrimidines/pharmacology , Pyrimidines/therapeutic use , Respiratory Tract Infections/diagnosis , Respiratory Tract Infections/drug therapy , Respiratory Tract Infections/microbiology , Treatment Outcome , Triazoles/pharmacology , Triazoles/therapeutic use , Voriconazole
5.
Clin Microbiol Infect ; 14(5): 487-94, 2008 May.
Article in English | MEDLINE | ID: mdl-18294241

ABSTRACT

A semi-national laboratory-based surveillance programme for fungaemia was initiated in 2003 that now covers c. 3.5 million inhabitants (64%) of the Danish population. In total, 1089 episodes of fungaemia were recorded during 2004-2006, corresponding to an annual incidence of 10.4/100 000 inhabitants. The annual number of episodes increased by 17% during the study period. Candida spp. accounted for 98% of the fungal pathogens. Although Candida albicans remained predominant, the proportion of C. albicans decreased from 66.1% in 2004 to 53.8% in 2006 (p <0.01), and varied considerably among participating departments, e.g., from 51.1% at a university hospital in Copenhagen to 67.6% in North Jutland County. Candida glabrata ranked second, and increased in proportion from 16.7% to 22.7% (p 0.04). Candida krusei was isolated rarely (4.1%), but the proportion doubled during the study period from 3.2% to 6.4% (p 0.06). MIC distributions of amphotericin B and caspofungin were in close agreement with the patterns predicted by species identification; however, decreased susceptibility to voriconazole, defined as an MIC of >1 mg/L, was detected in one (2.5%) C. glabrata isolate in 2004 and in 12 (14.0%) isolates in 2006 (p 0.03). Overall, the proportion of isolates with decreased susceptibility to fluconazole exceeded 30% in 2006. The incidence of fungaemia in Denmark was three-fold higher than that reported from other Nordic countries and is increasing. Decreased susceptibility to fluconazole is frequent, and a new trend towards C. glabrata isolates with elevated voriconazole MICs was observed.


Subject(s)
Azoles/pharmacology , Candida albicans/isolation & purification , Candida glabrata/isolation & purification , Candidiasis/epidemiology , Drug Resistance, Fungal/drug effects , Fungemia/epidemiology , Antifungal Agents/pharmacology , Denmark/epidemiology , Humans , Microbial Sensitivity Tests , Sentinel Surveillance
6.
Clin Microbiol Infect ; 11(5): 347-52, 2005 May.
Article in English | MEDLINE | ID: mdl-15819859

ABSTRACT

The occurrence of the two Shewanella species found in clinical specimens, Shewanella algae and Shewanella putrefaciens, correlates with the temperature and salinity of seawater. This means that Shewanella infections occur in warm climates or during especially warm summers in temperate climates. The infections described most commonly involve ears, skin and soft tissue, with or without bacteraemia. Primary bacteraemia with a fulminant course is also seen in immunocompromised patients. Important differential characteristics between the two species include the ability of S. algae to produce mucoid colonies with beta-haemolysis on sheep blood agar, to grow at 42 degrees C and in NaCl 6% w/v, and to reduce nitrite, and an inability to produce acid from maltose, all of which are in contrast to the characteristics of S. putrefaciens. Automated identification systems fail to differentiate between S. algae and S. putrefaciens, as S. algae is not included in the databases of these systems. Presumably for this reason, most Shewanella infections reported during recent years have been attributed to S. putrefaciens. However, when extensive phenotypic characterisation is performed, most human infections are seen to be caused by S. algae. As the two species seem to have different pathogenic potential for humans, correct identification is important, and this is possible in routine clinical microbiology laboratories.


Subject(s)
Gram-Negative Bacterial Infections , Shewanella , Animals , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Ear Diseases/pathology , Gram-Negative Bacterial Infections/drug therapy , Gram-Negative Bacterial Infections/epidemiology , Gram-Negative Bacterial Infections/pathology , Humans , Microbial Sensitivity Tests , Phenotype , Seawater/microbiology , Shewanella/drug effects , Shewanella/isolation & purification , Shewanella/pathogenicity , Shewanella putrefaciens , Skin Diseases, Bacterial/pathology , Temperature
7.
Clin Microbiol Infect ; 10(6): 499-501, 2004 Jun.
Article in English | MEDLINE | ID: mdl-15191376

ABSTRACT

Fusarium spp. cause infections only rarely in immunologically competent hosts, but disseminated infection may occur in severely immunocompromised patients. Symptoms of disseminated infection are persistent fever, despite broad-spectrum antibacterial and antifungal treatment, associated with skin lesions, most commonly on the extremities, in 60-80% of patients. A mortality rate of 50-75% has been reported for patients with disseminated fusariosis. Despite treatment failures, amphotericin B remains the preferred drug, in part because of lack of alternatives. Voriconazole is a promising new agent, but more clinical experience is required.


Subject(s)
Fungemia/diagnosis , Fusarium/isolation & purification , Hematologic Diseases/complications , Immunocompromised Host , Aged , Denmark , Female , Fungemia/microbiology , Humans , Male , Middle Aged , Mycoses/diagnosis , Mycoses/microbiology
8.
Acta Paediatr ; 92(11): 1314-21, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14696852

ABSTRACT

UNLABELLED: Most infants are infected with respiratory syncytial virus (RSV) during the first 2 y of life. The majority have only a mild upper respiratory tract infection, but 1-2% develop a more severe illness and are admitted to hospital. AIM: To carry out a study of risk factors for hospital admission because of RSV infection in Denmark in children aged less than 2 y of age. METHODS: The study population included all 1252 children admitted to hospital with verified RSV infection in two Danish counties during the 5-y period 1990-1994. The investigation comprised a retrospective case-control study with five matched controls per case. In a multivariate analysis the risk factors included medical and demographic variables, and in infants <3 mo of age at hospitalization, two aspects of innate immunity: mannose-binding lectin (MBL) concentration and maternal RSV serum antibody titre, measured on eluates from stored dried blood from the infants' 4th day of life. The effect of each risk factor is expressed as an odds ratio, corresponding to the relative risk of being a case rather than a control if the risk factor is present. RESULTS: The following independent risk factors were identified: age, sex, month of birth, gestational age, birthweight, presence of a sibling, up to 5 y older than the case, and maternal smoking during pregnancy. There was a marginal effect of maternal RSV antibody levels, but no effect of neonatal serum MBL concentration or of crowding in the household. CONCLUSIONS: Ninety percent of cases and 80% of controls had one or more risk factors. Even though several factors were found to increase the risk for hospitalization for RSV disease, all the effects were small and no single specific factor could be identified to explain the hospitalization of the minority of children with RSV infection.


Subject(s)
Antibodies, Viral/blood , Respiratory Syncytial Virus Infections/virology , Respiratory Syncytial Viruses/immunology , Age Factors , Case-Control Studies , Female , Hospitalization , Humans , Infant , Length of Stay , Male , Multivariate Analysis , Respiratory Syncytial Virus Infections/blood , Respiratory Syncytial Virus Infections/immunology , Retrospective Studies , Risk Factors
9.
Clin Microbiol Infect ; 8(2): 122-4, 2002 Feb.
Article in English | MEDLINE | ID: mdl-11952728

ABSTRACT

The use of direct susceptibility testing from specimens has led to the fortuitous observation that penicillin-susceptible strains have larger inhibition zones for mecillinam than do beta-lactamase producers. The current study was, therefore, undertaken to test 179 Staphylococcus aureus isolates for mecillinam susceptibility by Rosco Neo-Sensitabs and to compare the results with commonly used tests for beta-lactamase production, i.e. size and character of penicillin inhibition zones, chromogenic cephalosporin (nitrocefin) tests and clover leaf assays. Agreement between methods was reached for 175 of 179 strains when disregarding the results of the nitrocefin tests, 88 isolates being found susceptible and 87 being found to be beta-lactamase producers. All 88 susceptible isolates had mecillinam zones of >22 mm, with the great majority being >25 mm; double zones did, however, occur. The 87 beta-lactamase producers had zones <14 mm or no zones. Four isolates presenting problems in had mecillinam zones of

Subject(s)
Amdinocillin/pharmacology , Drug Resistance, Bacterial , Staphylococcus aureus/drug effects , Staphylococcus aureus/enzymology , beta-Lactamases/biosynthesis , Humans , Microbial Sensitivity Tests
13.
Ugeskr Laeger ; 162(33): 4373-6, 2000 Aug 14.
Article in Danish | MEDLINE | ID: mdl-10962959

ABSTRACT

Today most upper respiratory tract infections are mild and of short duration with minor risk of complications. Hence, the effects of antibiotic treatment are marginal. The only and most important reason for treatment is to stop dissemination. Penicillin V should be the first drug of choice. A review of the literature about antibiotic treatment of upper respiratory tract infections shows that most published studies exclude two categories of patients: children below the age of 6 months and patients who are severely ill. Therefore, there is an additional need for further studies focused on select groups of patients to investigate the benefit, if any, of antibiotic treatment as well as to study the effect of introducing near-patient-tests and the use of extended microbiological service in daily clinical practice.


Subject(s)
Anti-Bacterial Agents/administration & dosage , Respiratory Tract Infections/drug therapy , Anti-Bacterial Agents/adverse effects , Child , Controlled Clinical Trials as Topic , Drug Resistance, Microbial , Humans , Infant , Patient Selection , Penicillin V/administration & dosage , Penicillin V/adverse effects , Penicillins/administration & dosage , Penicillins/adverse effects , Respiratory Tract Infections/microbiology
18.
Scand J Prim Health Care ; 17(3): 185-90, 1999 Sep.
Article in English | MEDLINE | ID: mdl-10555250

ABSTRACT

OBJECTIVE: To evaluate the usefulness of medical audit of GPs' antibiotic prescription habits. DESIGN: Medical audit according to the APO method. Registration of antibiotic prescriptions for respiratory tract infections during a 3 year period. Intervention with courses, visits to the laboratory, and distribution of recommendations concerning diagnosis and treatment of respiratory infections. SETTING: 24 Danish GPs in cooperation with Audit Project Odense (APO) and Department of Clinical Microbiology, Odense University Hospital. 207 GPs acted as controls. MAIN OUTCOME MEASURES: Changes in the number of antibiotic prescriptions and in the penicillin/broad-spectrum antibiotic ratio. RESULTS: The proportion of antibiotic prescriptions was reduced during the investigation period, but a similar reduction was found in the control groups. Only for acute sinusitis was a lasting decrease not found in the control groups recorded. The penicillin/broad-spectrum antibiotic ratio increased in the intervention group (1.33 in 1992, 1.94 in 1993 and 2.70 in 1995). This increase was significantly higher than in the control groups. The change was seen for acute sinusitis, bronchitis, and pneumonia, but not for acute otitis media or acute tonsillitis. The changes induced from 1992 to 1993 were maintained or increased from 1993 to 1995 although the educational measures had stopped. CONCLUSION: Medical audit according to the APO method is a useful tool for inducing and maintaining desirable changes in GPs' prescription habits.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Drug Utilization/statistics & numerical data , Medical Audit/methods , Practice Patterns, Physicians'/statistics & numerical data , Respiratory Tract Infections/drug therapy , Chi-Square Distribution , Denmark , Evaluation Studies as Topic , Family Practice , Humans , Prospective Studies
19.
J Clin Microbiol ; 37(3): 828-9, 1999 Mar.
Article in English | MEDLINE | ID: mdl-9986867

ABSTRACT

Cross-reactions with Fusobacterium necrophorum were found in a PCR designed for detection of a wide range of mycoplasma species. Twenty-five strains of Fusobacterium were examined; all 14 F. necrophorum strains reacted positively, whereas all 7 Fusobacterium nucleatum strains reacted negatively. Two strains that were not F. necrophorum yielded variable results.


Subject(s)
Artifacts , Fusobacterium Infections/diagnosis , Fusobacterium necrophorum/classification , Lung Abscess/diagnosis , Mycoplasma/classification , Mycoplasma/isolation & purification , RNA, Ribosomal, 16S/genetics , Adolescent , Anti-Bacterial Agents/therapeutic use , Clindamycin/therapeutic use , DNA Primers , DNA, Ribosomal/genetics , Diagnosis, Differential , Female , Fusobacterium Infections/drug therapy , Fusobacterium necrophorum/genetics , Humans , Lung Abscess/drug therapy , Lung Abscess/microbiology , Mycoplasma/genetics , Polymerase Chain Reaction/methods , Sensitivity and Specificity , Sequence Alignment , Species Specificity
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