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1.
Environ Sci Pollut Res Int ; 31(6): 8974-8984, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38183548

ABSTRACT

The current article focuses on the preparation and characterization of garbage enzyme (GE) and explores its applications in treating leachate. GE is prepared from fruit and vegetable wastes and characterized via analysis of metabolites, carbohydrates, proteins, antioxidants, and enzymatic activities. This study extends our understanding of GE by reporting the presence of various metabolites. Moreover, a metagenomic analysis of GE is presented, shedding light on the microbial diversity. Firmicutes emerged as the dominant phylum, surpassing other phyla, including Proteobacteria and Actinobacteria. When exploring the potential for leachate treatment, the results indicate that vegetable GE shows 68% reduction in COD (chemical oxygen demand) and 39% reduction in ammoniacal nitrogen. Similarly, non-citrus GE also showed 64% reduction in COD and a 37% reduction in ammoniacal nitrogen, followed by citrus GE with a 33% reduction in COD and a 34% reduction in ammoniacal nitrogen compared to the control.


Subject(s)
Garbage , Refuse Disposal , Water Pollutants, Chemical , Refuse Disposal/methods , Water Pollutants, Chemical/analysis , Nitrogen/analysis , Biological Oxygen Demand Analysis , Vegetables/metabolism
2.
Plants (Basel) ; 11(21)2022 Oct 28.
Article in English | MEDLINE | ID: mdl-36365340

ABSTRACT

Catharanthus roseus synthesizes bioactive therapeutic metabolites, known as monoterpenoid indole alkaloids (MIAs), including antineoplastic vinblastine and vincristine, which have high global demand, and antihypertensive ajmalicine, a serpentine. However, the in planta biosynthesis and accumulation of these phytopharmaceuticals are very low, attributed to their high cytotoxicity in the plant. Considering the low in planta concentration and over-harvesting of plant resources, biotechnological interventions have been undertaken to enhance the production of MIAs in plant systems. The present study was carried out to mutation through chemical and physical mutagenesis with sodium azide, ethyl methane sulfonate and X-rays, respectively, on C. roseus to determine their possible effects on the transcriptional modulation of MIA biosynthetic pathways in planta. The chemical mutagenesis resulted in delayed seed pod development in mutated C. roseus plants, with distinct leaf morphology and flower color. However, X-ray mutagenesis resulted in pollen-less sterile flowers. An HPLC analysis confirmed the higher catharanthine, vindoline and vinblastine content in sodium azide and X-ray mutants, and was further supported by higher PRX1 transcript levels estimated through real-time PCR analysis. The transcription factors WRKY1 and ORCA2 were found negatively regulated along with major MIA pathway genes in chemical mutants and their M1 generation, but showed positive regulation in X-ray M0 mutants. The induced mutagenesis of C. roseus provides a prospective strategy to modulate plant transcriptomes and enhance the biosynthesis of pharmaceutically important antineoplastic vinblastine in the plant.

3.
J Conserv Dent ; 25(4): 448-451, 2022.
Article in English | MEDLINE | ID: mdl-36187860

ABSTRACT

Aim: The study aims to measure the surface roughness (Ra) of three resin composites subsequent to polishing with diamond-impregnated polishing paste. Materials and Methods: Sixty specimens (10 mm × 2 mm) were prepared in metal molds using three nanocomposites: GC Sculpt, Filtek Z350 XT, and Tetric N Ceram. Specimens were then subjected to baseline roughening with #600 grit sandpaper and were polished with DirectDia paste according to the manufacturer's instructions. After polishing, the Ra of resin composites of all the specimens was measured using profilometer and the surfaces were seen under scanning electron microscope. Results: Tetric N Ceram specimens were significantly smoother and had the least Ra value compared to other groups. Conclusion: Among the three resin composites tested, Tetric N Ceram exhibited the least Ra value owing to the small size of inorganic filler particles.

4.
Environ Monit Assess ; 194(10): 708, 2022 Aug 25.
Article in English | MEDLINE | ID: mdl-36006490

ABSTRACT

The characterisation of solid waste (SW), leachate, is essential for developing an appropriate management strategy or treatment method. However, due to a range of contributing factors, such as waste type and dumping site locations, forecasting leachate quality is often challenging. This research article discusses leachate quality indicators and the temporal variations of leachate quality collected throughout various seasons and after 1-2 years of storage. In addition to that, the article also provides the data of different physicochemical parameters of SW and ground water (GW) quality collected from of Pirana solid waste dumping area (Pirana SWD), Ahmedabad, India, and surrounding areas throughout various seasons. The parameters like pH, COD, TDS, sulphates, nitrates, ammonia nitrogen, hardness, and heavy metals were all monitored to see whether there any temporal variations. When leachates were obtained 'fresh,' all parameters evaluated showed significantly higher values. As time passed, the values of the parameters (COD, ammonia nitrogen) stabilised. Heavy metals such as Hg, As, Pb, and Cr were detected in both fresh and old samples. Similarly in SW, the presence of heavy metals Hg (0.39 ppb), Pb (1.12 ppb), and Cr (16.86 ppb) were also detected. In case of GW, some samples also show the high TDS but the presence of metals like Cr, Ni, and Zn is less than permissible limit.


Subject(s)
Groundwater , Mercury , Metals, Heavy , Refuse Disposal , Water Pollutants, Chemical , Ammonia , Environmental Monitoring , India , Lead , Metals, Heavy/analysis , Nitrogen , Solid Waste/analysis , Waste Disposal Facilities , Water Pollutants, Chemical/analysis
5.
Plant Mol Biol ; 110(3): 235-251, 2022 Oct.
Article in English | MEDLINE | ID: mdl-35780285

ABSTRACT

KEY MESSAGE: OscWRKY1 from Ocimum sanctum positively regulates phenylpropanoid pathway genes and rosmarinic acid content. OscWRKY1 overexpression promotes resistance against bacterial pathogen in Arabidopsis. WRKY transcription factor (TF) family regulates various developmental and physiological functions in plants. PAL genes encode enzymes which are involved in plant defense responses, but the direct regulation of PAL genes and phenylpropanoid pathway through WRKY TF's is not well characterized. In the present study, we have characterized an OscWRKY1 gene from Ocimum sanctum which shows induced expression by methyl jasmonate (MeJA), salicylic acid (SA), and wounding. The recombinant OscWRKY1 protein binds to the DIG-labeled (Digoxigenin) W-box cis-element TTGAC[C/T] and activates the LacZ reporter gene in yeast. Overexpression of OscWRKY1 enhances Arabidopsis resistance towards Pseudomonas syringae pv. tomato Pst DC3000. Upstream activator sequences of PAL and C4H have been identified to contain the conserved W-box cis-element (TTGACC) in both O. sanctum and Arabidopsis. OscWRKY1 was found to interact with W-box cis-element present in the PAL and C4H promoters. Silencing of OscWRKY1 using VIGS resulted in reduced expression of PAL, C4H, COMT, F5H and 4CL transcripts. OscWRKY1 silenced plants exhibit reduced PAL activity, whereas, the overexpression lines of OscWRKY1 in Arabidopsis exhibit increased PAL activity. Furthermore, the metabolite analysis of OscWRKY1 silenced plants showed reduced rosmarinic acid content. These results revealed that OscWRKY1 positively regulates the phenylpropanoid pathway genes leading to the alteration of rosmarinic acid content and enhances the resistance against bacterial pathogen in Arabidopsis.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Cinnamates , Depsides , Digoxigenin/metabolism , Disease Resistance/genetics , Gene Expression Regulation, Plant , Ocimum sanctum/metabolism , Plant Diseases/genetics , Plant Diseases/microbiology , Pseudomonas syringae/physiology , Salicylic Acid/metabolism , Salicylic Acid/pharmacology , Transcription Factors/genetics , Transcription Factors/metabolism , Rosmarinic Acid
6.
Water Sci Technol ; 85(11): 3285-3300, 2022 Jun.
Article in English | MEDLINE | ID: mdl-35704411

ABSTRACT

Rapid development of the population has brought about a serious problem of waste generation and management. Open dumping and land filling are two of the preferred options for waste management and treatment. As a consequence of this, the accumulation of leachates has become one of the concerns for environmental sustainability. In this regard, various treatment methodologies have been developed in recent decades. Among them, the nanomaterial-based approaches are the emerging ones in the current scenario due to their various unique properties. Furthermore, nanomaterial-based assemblies (i.e., nanomaterials combined with microbes, chemical catalysts, enzymes, and so on) have been introduced as a novel modification for leachate treatment. This work, therefore, has been dedicated to comprehensively reviewing all nanomaterial based leachate treatment techniques. In this regard, the first part of this review will discuss the nano catalyst, nano adsorbent along with their synthesis and mechanistic view of pollutant removal potential. In the second part, the nanomaterial-based microbial conjugates applied in the leachate treatments have been discussed. Apart from this, various other nanomaterial-based methods have been discussed in the third part of the review. Hence this review is providing an insight of all the recent developments pertaining to the nano material based leachate treatment techniques.


Subject(s)
Nanostructures , Waste Management , Water Pollutants, Chemical , Waste Management/methods , Water Pollutants, Chemical/chemistry
7.
Plant Cell Rep ; 41(8): 1651-1671, 2022 Aug.
Article in English | MEDLINE | ID: mdl-35579713

ABSTRACT

KEY MESSAGE: The present review highlights the regulatory roles of microRNAs in plant secondary metabolism and focuses on different bioengineering strategies to modulate secondary metabolite content in plants. MicroRNAs (miRNAs) are the class of small endogenous, essential, non-coding RNAs that riboregulate the gene expression involved in various biological processes in most eukaryotes. MiRNAs has emerged as important regulators in plants that function by silencing target genes through cleavage or translational inhibition. These miRNAs plays an important role in a wide range of plant biological and metabolic processes, including plant development and various environmental response controls. Several important plant secondary metabolites like alkaloids, terpenoids, and phenolics are well studied for their function in plant defense against different types of pests and herbivores. Due to the presence of a wide range of biological and pharmaceutical properties of plant secondary metabolites, it is important to study the regulation of their biosynthetic pathways. The contribution of miRNAs in regulating plant secondary metabolism is not well explored. Recent advancements in molecular techniques have improved our knowledge in understanding the molecular function of genes, proteins, enzymes, and small RNAs involved in different steps of secondary metabolic pathways. In the present review, we have discussed the recent progress made on miRNA biogenesis, its regulation, and highlighted the current research developed in the field of identification, analysis, and characterizations of various miRNAs that regulate plant secondary metabolism. We have also discussed how different bioengineering strategies such as artificial miRNA (amiRNA), endogenous target mimicry, and CRISPR/Cas9 could be utilized to enhance the secondary metabolite production in plants.


Subject(s)
MicroRNAs , RNA, Small Untranslated , Gene Expression Regulation, Plant , MicroRNAs/genetics , MicroRNAs/metabolism , Plant Development , Plants/genetics , Plants/metabolism , RNA, Small Untranslated/metabolism , Secondary Metabolism/genetics
8.
J Phys Condens Matter ; 34(28)2022 May 12.
Article in English | MEDLINE | ID: mdl-35447612

ABSTRACT

We have discovered spin-state transition (S= 2 toS= 5/2) of Co ions due to Mg substitution in the Ca3Co2O6apparent in the magnetic susceptibility, x-ray photoelectron spectroscopy (XPS), and first-principles study. We also examine the effect of Mg substitution on the magnetic and electronic structure of Ca3Co2O6by first-principles calculations. It involves generalized gradient approximation with Coulomb interaction (U) in exchange-correlation energy functional. Our study shows a reasonable agreement between effective magnetic moment (µeff) determined from the Curie-Weiss fit with that from the XPS analysis and first-principles calculations study. We have attributed the decrease in positive intra-chain exchange interaction constant (J1/kB) to the antiferromagnetically coupled induced Co4+ions (S= 5/2) arising from the Mg2+ions substitution. The in-field metamagnetic transitions in the isothermalM(H) curves below the critical field (Hc) have been accurately mapped and successfully explained by the change in magnetic entropy (ΔS) calculations and Arrott plots. Electronic structure study reveals hole-type doping of Mg atom, and the Fermi level (EF) shifts below. Density of state and band structure calculation indicates strong hybridization between partial states of Co-3d and O-2p orbitals for the Mg-doped compound due to which the band crossing at Fermi level is observed, and a hole-type Fermi surface is formed.

9.
Plant Cell Physiol ; 62(5): 894-912, 2021 Oct 01.
Article in English | MEDLINE | ID: mdl-34009389

ABSTRACT

MicroRNAs (miRNAs) are small non-coding, endogenous RNAs containing 20-24 nucleotides that regulate the expression of target genes involved in various plant processes. A total of 1,429 conserved miRNAs belonging to 95 conserved miRNA families and 12 novel miRNAs were identified from Bacopa monnieri using small RNA sequencing. The Bm-miRNA target transcripts related to the secondary metabolism were further selected for validation. The Bm-miRNA expression in shoot and root tissues was negatively correlated with their target transcripts. The Bm-miRNA cleavage sites were mapped within the coding or untranslated region as depicted by the modified RLM-RACE. In the present study, we validate three miRNA targets, including asparagine synthetase, cycloartenol synthase and ferulate 5 hydroxylase (F5H) and elucidate the regulatory role of Bm-miR172c-5p, which cleaves the F5H gene involved in the lignin biosynthesis. Overexpression (OE) of Bm-miR172c-5p precursor in B. monnieri suppresses F5H gene, leading to reduced lignification and secondary xylem thickness under control and drought stress. By contrast, OE of endogenous target mimics (eTMs) showed enhanced lignification and secondary xylem thickness leading to better physiological response under drought stress. Taken together, we suggest that Bm-miRNA172c-5p might be a key player in maintaining the native phenotype of B. monnieri under control and different environmental conditions.


Subject(s)
Bacopa/genetics , Bacopa/metabolism , Lignin/biosynthesis , MicroRNAs/genetics , Mixed Function Oxygenases/genetics , Droughts , Gene Expression Regulation, Plant , Lignin/genetics , Mixed Function Oxygenases/metabolism , Phylogeny , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified , Reproducibility of Results , Sequence Analysis, RNA , Xylem/chemistry , Xylem/metabolism
10.
Planta ; 253(5): 89, 2021 Apr 05.
Article in English | MEDLINE | ID: mdl-33818685

ABSTRACT

MAIN CONCLUSION: BmG10H-1 transcript from B. monnieri was functionally active. BmG10H-1 promoter drives GUS activity in response to MeJA and wounding. BmMYB35 regulates BmG10H-1 transcript by binding to its promoter. Geraniol 10-hydroxylase (G10H) is one of the important regulatory cytochrome P450 monooxygenase, which is involved in the biosynthesis of monoterpene alkaloids. However, G10H is not characterized at the enzymatic or at the regulatory aspect in B. monnieri. In the present study, we have identified two transcripts of BmG10H (BmG10H-1and BmG10H-2) and characterized the methyl jasmonate (MeJA) and wound responsive BmG10H-1 transcript from B. monnieri. BmG10H-1 showed induced expression after 3 h of MeJA and wounding treatment in the shoot. Yeast purified recombinant BmG10H-1 protein is enzymatically active, having Vmax of 0.16 µMsec-1 µg-1 protein and catalyzes the hydroxylation of geraniol to 10-hydroxy geraniol. The BmG10H-1 promoter was isolated by using the genome walking method. BmG10H-1 promoter can drive GUS expression in transgenic Arabidopsis thaliana. GUS activity of MeJA and wound-treated Arabidopsis seedlings were found to be increased as compared to the control untreated seedlings, whereas no GUS activity was found in deleted MeJA responsive and W-box cis-elements. This shows that the BmG10H-1 promoter contains functional MeJA (TGACG) and wound responsive (TGACCT) cis-elements. Further, shoot specific and MeJA responsive recombinant BmMYB35 protein was purified, which binds with the MYB recognition cis-element (TGGTTA) present in the BmG10H-1 promoter and transcriptionally activates the reporter gene in yeast. In conclusion, the characterization of MeJA and wound responsive BmG10H-1 provides novel information about its transcriptional regulation by binding with MYB transcription factor in B. monnieri.


Subject(s)
Acetates/metabolism , Bacopa/genetics , Bacopa/metabolism , Cyclopentanes/metabolism , Cytochrome P-450 Enzyme System/genetics , Genes, Plant/genetics , Oxylipins/metabolism , Bacopa/enzymology , Base Sequence , Gene Expression Regulation, Plant , Plants, Genetically Modified/genetics
11.
Indian J Psychol Med ; 42(1): 80-86, 2020.
Article in English | MEDLINE | ID: mdl-31997869

ABSTRACT

BACKGROUND: Increasing stress has been recognized as a major public health problem in the developing world accelerated by an ongoing demographic, economic, and sociocultural transition. Our study objectives were to validate a Hindi version of the 10-item Perceived Stress Scale (PSS-10) and to also assess the extent of perceived stress and its correlates among an adult population in an urban area of Delhi. METHODOLOGY: A community-based cross-sectional study was conducted in an urban resettlement colony of Delhi among 480 adult subjects aged 25--65 years, during the period from January to December 2015. The PSS-10 was translated into Hindi and validated in the study population. Data was analyzed using IBM SPSS Version 25. RESULTS: A total of 243 (50.6%) men and 237 (49.4%) women were enrolled. The scale had an acceptable level of internal consistency (Cronbach's alpha = 0.731). A principal component analysis was run on the PSS-10 data, based on which a three-component structure was accepted, which explained 61% of the total variance. The mean PSS score was 19.25 (SD = 4.50) years. Perceived stress was highest in the 35--50 age group. On multivariate analysis, low socioeconomic status and a white-collar occupation were found to be associated with increased perceived stress (P < 0.001). CONCLUSION: A high burden of perceived stress exists in residents of a low-income urban population in India.

12.
Plant Sci ; 290: 110291, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31779892

ABSTRACT

A. racemosus is a rich source of pharmacologically active steroidal saponins. Most of the studies are related to its chemistry and pharmacology, but the pathway involved in the biosynthesis of steroidal saponin is not much emphasized. Squalene epoxidase acts as a rate-limiting enzyme in this biosynthesis. In this study, we have selected root specific squalene epoxidase ArSQE from A. racemosus for its characterization. ArSQE was able to complement ergosterol auxotrophy in erg1 yeast mutants. Mutants were sensitive to the antifungal drug terbinafine, whereas ArSQE complementation made them tolerant to the same drug. ArSQE plays a significant role in early germination in transgenic tobacco. The transgenic tobacco seedlings overexpressing ArSQE were tolerant to terbinafine and abiotic stress. Expression analysis of transcripts in ArSQE transgenic lines suggests that it mostly affects ABA, GA, stress, and sterol related functions in transgenic tobacco. Further, root specific MeJA responsive A. racemosus bZIP transcription factors (TFs), ArTGA1 and ArTGA2, were identified that bind to MeJA responsive cis-element present in the promoter region of ArSQE. Characterization of ArSQE of A. racemosus provides new information about its regulation through MeJA responsive bZIP TF along with its role in the development and abiotic stress response in transgenic tobacco.


Subject(s)
Asparagus Plant/physiology , Basic-Leucine Zipper Transcription Factors/genetics , Gene Expression Regulation, Plant , Germination/genetics , Plant Proteins/genetics , Squalene Monooxygenase/genetics , Amino Acid Sequence , Asparagus Plant/enzymology , Asparagus Plant/genetics , Basic-Leucine Zipper Transcription Factors/metabolism , Phylogeny , Plant Proteins/metabolism , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Sequence Alignment , Squalene Monooxygenase/metabolism , Stress, Physiological , Nicotiana/genetics , Nicotiana/physiology
13.
Plant Mol Biol ; 100(4-5): 351-365, 2019 Jul.
Article in English | MEDLINE | ID: mdl-31030374

ABSTRACT

KEY MESSAGE: Present review describes the structure, evolution, transport mechanism and physiological functions of SWEETs. Their application using TALENs and CRISPR/CAS9 based genomic editing approach is discussed. Sugars Will Eventually be Exported Transporters (SWEET) proteins were first identified in plants as the novel family of sugar transporters which mediates the translocation of sugars across cell membranes. The SWEET family of sugar transporters is unique in terms of their structure which contains seven predicted transmembrane domains with two internal triple-helix bundles which possibly originate due to prokaryotic gene duplication. SWEETs perform diverse physiological functions such as pollen nutrition, nectar secretion, seed filling, phloem loading, and pathogen nutrition which we have discussed in the present review. We also discuss how transcriptional activator-like effector nucleases (TALENs) and CRISPR/CAS9 genome editing tools are used to engineer SWEET mutants which modulate pathogen resistance in plants and its applications in the field of agriculture. The expression of SWEETs promises to implement insights into many other cellular transport mechanisms. To conclude, the present review highlights the recent aspects which will further develop better understanding of molecular evolution, structure, and function of SWEET transporters in plants.


Subject(s)
Monosaccharide Transport Proteins/physiology , Plant Proteins/physiology , Cell Membrane/metabolism , Disease Resistance , Evolution, Molecular , Gibberellins/metabolism , Models, Molecular , Monosaccharide Transport Proteins/chemistry , Phloem/metabolism , Plant Proteins/chemistry , Plants/metabolism , Plants/microbiology , Protein Domains , Sequence Analysis, Protein
14.
Planta ; 248(3): 519-544, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29748819

ABSTRACT

MAIN CONCLUSION: Steroidal saponins exhibited numerous pharmacological activities due to the modification of their backbone by different cytochrome P450s (P450) and UDP glycosyltransferases (UGTs). Plant-derived steroidal saponins are not sufficient for utilizing them for commercial purpose so in vitro production of saponin by tissue culture, root culture, embryo culture, etc, is necessary for its large-scale production. Saponin glycosides are the important class of plant secondary metabolites, which consists of either steroidal or terpenoidal backbone. Due to the existence of a wide range of medicinal properties, saponin glycosides are pharmacologically very important. This review is focused on important medicinal properties of steroidal saponin, its occurrence, and biosynthesis. In addition to this, some recently identified plants containing steroidal saponins in different parts were summarized. The high throughput transcriptome sequencing approach elaborates our understanding related to the secondary metabolic pathway and its regulation even in the absence of adequate genomic information of non-model plants. The aim of this review is to encapsulate the information related to applications of steroidal saponin and its biosynthetic enzymes specially P450s and UGTs that are involved at later stage modifications of saponin backbone. Lastly, we discussed the in vitro production of steroidal saponin as the plant-based production of saponin is time-consuming and yield a limited amount of saponins. A large amount of plant material has been used to increase the production of steroidal saponin by employing in vitro culture technique, which has received a lot of attention in past two decades and provides a way to conserve medicinal plants as well as to escape them for being endangered.


Subject(s)
Saponins/biosynthesis , Steroids/biosynthesis , Gene Expression Profiling , High-Throughput Nucleotide Sequencing , In Vitro Techniques , Metabolic Networks and Pathways , Plants/enzymology , Plants/metabolism , Plants, Medicinal/metabolism , Tissue Culture Techniques
15.
Plant Biotechnol J ; 16(1): 221-233, 2018 01.
Article in English | MEDLINE | ID: mdl-28636266

ABSTRACT

As waterlogging and successive events severely influence growth and development of economically important plants, we attempted to characterize the role of a waterlogging-responsive group I (A-6) ethylene response factor (MaRAP2-4) from Mentha arvensis. Waterlogging, ethylene and methyl jasmonate rapidly induced the expression of MaRAP2-4. MaRAP2-4 interacted with multiple cis-elements like dehydration response elements (DRE1/2), anoxia/jasmonic acid response element (JARE) and GCC box showing its involvement in multiple responses. MaRAP2-4 localizes in the nucleus and acts as a transcriptional activator. Truncation and internal deletion identified a 20 amino acids potential transactivation domain (PLPSSVDAKLEAICQSLAIN) in MaRAP2-4. MaRAP2-4 transgenic Arabidopsis showed enhanced waterlogging and subsequent oxidative stress tolerance. Microarray analysis revealed that within up-regulated genes 483, 212 and 132 promoters carry either single or multiple copies of DRE, JARE and GCC cis-element/s, respectively. Within these promoters, a large section belongs to carbohydrate metabolism/transport, including many SWEET transporters. Further analysis showed MaRAP2-4 specifically targets two positions in AtSWEEET10 promoter carrying DRE and/or GCC box that might regulate carbohydrate availability and waterlogging tolerance. These results demonstrate that MaRAP2-4 is a positive regulator of waterlogging tolerance, and as energy-consuming processes such as carbohydrate biosynthesis are reduced under waterlogging-induced hypoxia, sugar transport through SWEETs may be the primary option to make sugar available to the required tissue.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Mentha/metabolism , Plants, Genetically Modified/metabolism , Acetates/metabolism , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Cyclopentanes/metabolism , Gene Expression Regulation, Plant/genetics , Gene Expression Regulation, Plant/physiology , Oxylipins/metabolism , Plants, Genetically Modified/genetics , Promoter Regions, Genetic/genetics
16.
BMC Genomics ; 18(1): 490, 2017 06 28.
Article in English | MEDLINE | ID: mdl-28659188

ABSTRACT

BACKGROUND: Bacopa monnieri commonly known as Brahmi is utilized in Ayurveda to improve memory and many other human health benefits. Bacosides enriched standardized extract of Bacopa monnieri is being marketed as a memory enhancing agent. In spite of its well known pharmacological properties it is not much studied in terms of transcripts involved in biosynthetic pathway and its regulation that controls the secondary metabolic pathway in this plant. The aim of this study was to identify the potential transcripts and provide a framework of identified transcripts involved in bacosides production through transcriptome assembly. RESULTS: We performed comparative transcriptome analysis of shoot and root tissue of Bacopa monnieri in two independent biological replicate and obtained 22.48 million and 22.0 million high quality processed reads in shoot and root respectively. After de novo assembly and quantitative assessment total 26,412 genes got annotated in root and 18,500 genes annotated in shoot sample. Quality of raw reads was determined by using SeqQC-V2.2. Assembled sequences were annotated using BLASTX against public database such as NR or UniProt. Searching against the KEGG pathway database indicated that 37,918 unigenes from root and 35,130 unigenes from shoot were mapped to 133 KEGG pathways. Based on the DGE data we found that most of the transcript related to CYP450s and UDP-glucosyltransferases were specifically upregulated in shoot tissue as compared to root tissue. Finally, we have selected 43 transcripts related to secondary metabolism including transcription factor families which are differentially expressed in shoot and root tissues were validated by qRT-PCR and their expression level were monitored after MeJA treatment and wounding for 1, 3 and 5 h. CONCLUSIONS: This study not only represents the first de novo transcriptome analysis of Bacopa monnieri but also provides information about the identification, expression and differential tissues specific distribution of transcripts related to triterpenoid sapogenin which is one of the most important pharmacologically active secondary metabolite present in Bacopa monnieri. The identified transcripts in this study will establish a foundation for future studies related to carrying out the metabolic engineering for increasing the bacosides biosynthesis and its regulation for human health benefits.


Subject(s)
Bacopa/genetics , Bacopa/metabolism , Gene Expression Profiling , Plant Roots/genetics , Plant Shoots/genetics , Saponins/biosynthesis , Triterpenes/chemistry , Gene Ontology , Propanols/metabolism , Saponins/chemistry , Transcription Factors/metabolism
17.
Eur J Pharm Biopharm ; 117: 212-223, 2017 Aug.
Article in English | MEDLINE | ID: mdl-28438550

ABSTRACT

Self-emulsifying drug delivery systems (SEDDS) have been used to solubilize poorly water-soluble drugs to improve exposure in high-dose pharmacokinetic (PK) and toxicokinetic (TK) studies. However, the absorbable dose is often limited by drug solubility in the lipidic SEDDS vehicle. This study focuses on increasing solubility and drug loading of ionizable drugs in SEDDS vehicles using lipophilic counterions to prepare lipophilic salts of drugs. SEDDS formulations of two lipophilic salts-atazanavir-2-naphthalene sulfonic acid (ATV-2-NSA) and atazanavir-dioctyl sulfosuccinic acid (ATV-Doc)-were characterized and their performance compared to atazanavir (ATV) free base formulated as an aqueous crystalline suspension, an organic solution, and a SEDDS suspension, using in vitro, in vivo, and in silico methods. ATV-2-NSA exhibited ∼6-fold increased solubility in a SEDDS vehicle, allowing emulsion dosing at 12mg/mL. In rat PK studies at 60mg/kg, the ATV-2-NSA SEDDS emulsion had comparable exposure to the free-base solution, but with less variability, and had better exposure at high dose than aqueous suspensions of ATV free base. Trends in dose-dependent exposure for various formulations were consistent with GastroPlus™ modeling. Results suggest use of lipophilic salts is a valuable approach for delivering poorly soluble compounds at high doses in Discovery.


Subject(s)
Drug Delivery Systems/methods , Drug Discovery/methods , Emulsifying Agents/administration & dosage , Lipids/administration & dosage , Animals , Drug Compounding/methods , Emulsifying Agents/blood , Emulsifying Agents/chemistry , Lipids/blood , Lipids/chemistry , Male , Rats , Rats, Sprague-Dawley , Solubility
19.
J Clin Diagn Res ; 9(9): PD01-2, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26500945

ABSTRACT

Paraganglioma in urinary bladder associated with pregnancy is extremely rare with a prevalence of less than 1%. We report a case of 25-year-old pregnant female who presented with gross haematuria and clot retention during first trimester. MRI pelvis showed a mass antero- inferior to bladder. Transurethral resection biopsy revealed paraganglioma of the urinary bladder. Her workup showed neither raised plasma free normetanephrine levels. Patient underwent partial cystectomy during second trimester. Postoperatively, she is normotensive with normal serum free normetanephrine levels. At term, she delivered a healthy female child. This case highlights a successful perinatal outcome with timely intervention, adequate preoperative control of hypertension and counselling. We report a case of paraganglioma of urinary bladder presenting as an early preeclampsia with successful perinatal outcome after surgery.

20.
Eur J Pharm Sci ; 76: 173-80, 2015 Aug 30.
Article in English | MEDLINE | ID: mdl-25960252

ABSTRACT

Weakly basic compounds which have pH dependent solubility are liable to exhibit pH dependent absorption. In some cases, a subtle change in gastric pH can significantly modulate the plasma concentration of the drug and can lead to sub-therapeutic exposure of the drug. Evaluating the risk of pH dependent absorption and potential drug-drug interaction with pH modulators are important aspects of drug discovery and development. In order to assess the risk around the extent of decrease in the systemic exposure of drugs co-administered with pH modulators in the clinic, a pH effect study is carried out, typically in higher species, mostly dog. The major limitation of a higher species pH effect study is the resource and material requirement to assess this risk. Hence, these studies are mostly restricted to promising or advanced leads. In our current work, we have used in vitro aqueous solubility, in silico simulations using GastroPlus™ and an in vivo rat pH effect model to provide a qualitative assessment of the pH dependent absorption liability. Here, we evaluate ketoconazole and atazanavir with different pH dependent solubility profiles and based on in vitro, in silico and in vivo results, a different extent of gastric pH effect on absorption is predicted. The prediction is in alignment with higher species and human pH effect study results. This in vitro, in silico and in vivo (IVISIV) correlation is then extended to assess pH absorption mitigation strategy. The IVISIV predicts pH dependent absorption for BMS-582949 whereas its solubility enhancing prodrug, BMS-751324 is predicted to mitigate this liability. Overall, the material requirement for this assessment is substantially low which makes this approach more practical to screen multiple compounds during lead optimization.


Subject(s)
Atazanavir Sulfate/pharmacokinetics , Computer Simulation , Drug Discovery/methods , Gastric Absorption , Gastric Mucosa/metabolism , Ketoconazole/pharmacokinetics , Models, Biological , Administration, Oral , Animals , Atazanavir Sulfate/administration & dosage , Atazanavir Sulfate/chemistry , Chemistry, Pharmaceutical , Gastric Acid/metabolism , Humans , Hydrogen-Ion Concentration , Ketoconazole/administration & dosage , Ketoconazole/chemistry , Male , Rats, Wistar , Solubility , Species Specificity
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