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1.
PLoS Genet ; 9(12): e1003967, 2013.
Article in English | MEDLINE | ID: mdl-24339789

ABSTRACT

Mouse early transposon insertions are responsible for ~10% of spontaneous mutant phenotypes. We previously reported the phenotypes and genetic mapping of Polypodia, (Ppd), a spontaneous, X-linked dominant mutation with profound effects on body plan morphogenesis. Our new data shows that mutant mice are not born in expected Mendelian ratios secondary to loss after E9.5. In addition, we refined the Ppd genetic interval and discovered a novel ETnII-ß early transposon insertion between the genes for Dusp9 and Pnck. The ETn inserted 1.6 kb downstream and antisense to Dusp9 and does not disrupt polyadenylation or splicing of either gene. Knock-in mice engineered to carry the ETn display Ppd characteristic ectopic caudal limb phenotypes, showing that the ETn insertion is the Ppd molecular lesion. Early transposons are actively expressed in the early blastocyst. To explore the consequences of the ETn on the genomic landscape at an early stage of development, we compared interval gene expression between wild-type and mutant ES cells. Mutant ES cell expression analysis revealed marked upregulation of Dusp9 mRNA and protein expression. Evaluation of the 5' LTR CpG methylation state in adult mice revealed no correlation with the occurrence or severity of Ppd phenotypes at birth. Thus, the broad range of phenotypes observed in this mutant is secondary to a novel intergenic ETn insertion whose effects include dysregulation of nearby interval gene expression at early stages of development.


Subject(s)
DNA Transposable Elements/genetics , Genes, X-Linked , Mutagenesis, Insertional/genetics , RNA Splicing/genetics , Animals , Calcium-Calmodulin-Dependent Protein Kinase Type 1/genetics , Chromosome Mapping , Dual-Specificity Phosphatases/genetics , Gene Expression Regulation , Genes, Dominant , Mice , Phenotype
2.
Cell ; 139(2): 337-51, 2009 Oct 16.
Article in English | MEDLINE | ID: mdl-19837035

ABSTRACT

Golgi membranes, from yeast to humans, are uniquely enriched in phosphatidylinositol-4-phosphate (PtdIns(4)P), although the role of this lipid remains poorly understood. Using a proteomic lipid-binding screen, we identify the Golgi protein GOLPH3 (also called GPP34, GMx33, MIDAS, or yeast Vps74p) as a PtdIns(4)P-binding protein that depends on PtdIns(4)P for its Golgi localization. We further show that GOLPH3 binds the unconventional myosin MYO18A, thus connecting the Golgi to F-actin. We demonstrate that this linkage is necessary for normal Golgi trafficking and morphology. The evidence suggests that GOLPH3 binds to PtdIns(4)P-rich trans-Golgi membranes and MYO18A conveying a tensile force required for efficient tubule and vesicle formation. Consequently, this tensile force stretches the Golgi into the extended ribbon observed by fluorescence microscopy and the familiar flattened form observed by electron microscopy.


Subject(s)
Golgi Apparatus/metabolism , Membrane Proteins/metabolism , Actins/metabolism , Animals , Gene Knockdown Techniques , Golgi Apparatus/chemistry , HeLa Cells , Humans , Hydrophobic and Hydrophilic Interactions , Membrane Proteins/analysis , Membrane Proteins/genetics , Myosins/metabolism , Phosphatidylinositol Phosphates/metabolism , Transport Vesicles/metabolism
3.
Am J Med Genet A ; 143A(24): 3161-8, 2007 Dec 15.
Article in English | MEDLINE | ID: mdl-17935235

ABSTRACT

We report on a father and daughter with hand-foot-genital syndrome (HFGS) with typical skeletal and genitourinary anomalies due to a 14-residue polyalanine expansion in HOXA13. This is the largest (32 residues) polyalanine tract so far described for any polyalanine mutant protein. Polyalanine expansion results in protein misfolding, cytoplasmic aggregation and degradation; however, HOXA13 polyalanine expansions appear to act as loss of function mutations in contrast to gain of function for HOXD13 polyalanine expansions. To address this paradox we examined the cellular consequences of polyalanine expansions on HOXA13 protein using COS cell transfection and immunocytochemistry. HOXA13 polyalanine expansion proteins form cytoplasmic aggregates, and distribution between cytoplasmic aggregates or the nucleus is polyalanine tract size-dependent. Geldanamycin, an Hsp90 inhibitor, reduces the steady-state abundance of all polyalanine-expanded proteins in transfected cells. We also found that wild-type HOXA13 or HOXD13 proteins are sequestered in HOXA13 polyalanine expansion cytoplasmic aggregates. Thus, the difference between HOXA13 polyalanine expansion loss-of-function and HOXD13 polyalanine expansion dominant-negative effect is not the ability to aggregate wild-type group 13 paralogs but perhaps to variation in activities associated with refolding, aggregation or degradation of the proteins.


Subject(s)
Foot Deformities, Congenital/genetics , Hand Deformities, Congenital/genetics , Homeodomain Proteins/genetics , Homeodomain Proteins/physiology , Peptides/genetics , Syndrome , Trinucleotide Repeat Expansion , Urogenital Abnormalities/genetics , Animals , Benzoquinones/pharmacology , COS Cells , Cell Nucleus/metabolism , Chlorocebus aethiops , Cytoplasm/metabolism , Female , Humans , Lactams, Macrocyclic/pharmacology , Male , Protein Folding , Transfection
4.
Curr Biol ; 15(15): 1407-12, 2005 Aug 09.
Article in English | MEDLINE | ID: mdl-16085494

ABSTRACT

Phosphoinositides play important roles in regulating the cytoskeleton and vesicle trafficking, potentially important processes at the cleavage furrow. However, it remains unclear which, if any, of the phosphoinositides play a role during cytokinesis. A systematic analysis to determine if any of the phosphoinositides might be present or of functional importance at the cleavage furrow has not been published. Several studies hint at a possible role for one or more phosphoinositides at the cleavage furrow. The best of these are genetic data identifying mutations in phosphoinositide-modifying enzymes (a PtdIns(4)P-5-kinase in S. pombe and a PI-4-kinase in D. melanogaster) that interfere with cytokinesis. The genetic nature of these experiments leaves questions as to how direct may be their contribution to cytokinesis. Here we show that a single phosphoinositide, PtdIns(4,5)P2, specifically accumulates at the furrow. Interference with PtdIns(4,5)P2 interferes with adhesion of the plasma membrane to the contractile ring at the furrow. Finally, four distinct interventions to specifically interfere with PtdIns(4,5)P2 each impair cytokinesis. We conclude that PtdIns(4,5)P2 is present at the cleavage furrow and is required for normal cytokinesis at least in part because of a role in adhesion between the contractile ring and the plasma membrane.


Subject(s)
Cytokinesis/physiology , Phosphatidylinositol Phosphates/metabolism , Actins/metabolism , Adaptor Proteins, Signal Transducing , Animals , CHO Cells , Cell Membrane/metabolism , Cricetinae , Cricetulus , Genetic Vectors , Green Fluorescent Proteins/metabolism , HeLa Cells , Humans , Mice , NIH 3T3 Cells , Phosphatidylinositol 4,5-Diphosphate , Phospholipase C gamma/metabolism , Proteins/metabolism
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